FFCP PHASE1:Mm9::chr14:64162836..64162851,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=210376|HGNC=|UniProt=Q9Z2D0|association_with_transcript=-46bp_to_ENSMUST00000058679,NM_177594,uc007uht.1_5end|description=CAGE_peak_3_at_Mtmr9_5end|id=chr14:64162836..64162851,-|ontology_enrichment_celltype=CL:0000117!2.58e-12!23;CL:0000337!2.58e-12!23;CL:0000393!3.21e-08!39;CL:0000211!3.21e-08!39;CL:0000540!4.84e-08!33;CL:0000047!4.84e-08!33;CL:0000031!4.84e-08!33;CL:0000404!4.84e-08!33;CL:0000221!6.82e-07!44;CL:0000133!6.82e-07!44;CL:0002319!7.18e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.02e-14,23;CL:0000337,4.02e-14,23;CL:0000540,5.11e-10,33;CL:0000047,5.11e-10,33;CL:0000031,5.11e-10,33;CL:0000404,5.11e-10,33;CL:0000393,5.17e-10,39;CL:0000211,5.17e-10,39;CL:0000221,2.11e-09,44;CL:0000133,2.11e-09,44;CL:0002319,2.17e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.97e-21!52;UBERON:0005068!1.97e-21!52;UBERON:0006241!1.97e-21!52;UBERON:0007135!1.97e-21!52;UBERON:0002616!1.99e-19!49;UBERON:0000955!2.17e-18!50;UBERON:0006238!2.17e-18!50;UBERON:0002020!3.63e-17!34;UBERON:0002346!6.43e-17!71;UBERON:0003075!6.43e-17!71;UBERON:0007284!6.43e-17!71;UBERON:0000073!3.36e-16!75;UBERON:0001016!3.36e-16!75;UBERON:0001017!8.48e-16!73;UBERON:0005743!8.48e-16!73;UBERON:0000033!1.42e-15!63;UBERON:0003080!2.42e-14!40;UBERON:0002780!4.16e-14!39;UBERON:0001890!4.16e-14!39;UBERON:0006240!4.16e-14!39;UBERON:0002791!6.34e-14!29;UBERON:0003528!6.34e-14!29;UBERON:0001893!6.34e-14!29;UBERON:0003056!3.74e-13!49;UBERON:0004121!4.17e-13!102;UBERON:0000924!4.17e-13!102;UBERON:0006601!4.17e-13!102;UBERON:0000956!6.44e-10!21;UBERON:0001869!6.44e-10!21;UBERON:0000203!6.44e-10!21;UBERON:0007811!1.75e-09!86;UBERON:0000153!2.86e-09!94;UBERON:0003076!4.95e-08!12;UBERON:0003057!4.95e-08!12;UBERON:0002619!4.97e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.05e-26,54;UBERON:0001049,3.34e-24,52;UBERON:0005068,3.34e-24,52;UBERON:0006241,3.34e-24,52;UBERON:0007135,3.34e-24,52;UBERON:0002346,4.58e-21,64;UBERON:0003075,4.58e-21,64;UBERON:0007284,4.58e-21,64;UBERON:0001016,1.83e-20,75;UBERON:0001017,5.50e-20,73;UBERON:0002020,6.44e-20,34;UBERON:0002616,1.15e-19,46;UBERON:0000955,8.26e-19,47;UBERON:0006238,8.26e-19,47;UBERON:0010371,8.18e-18,73;UBERON:0004121,1.64e-16,95;UBERON:0000924,1.64e-16,95;UBERON:0006601,1.64e-16,95;UBERON:0003528,4.22e-16,29;UBERON:0002791,4.22e-16,29;UBERON:0001893,4.22e-16,29;UBERON:0003080,6.23e-16,40;UBERON:0002780,1.18e-15,39;UBERON:0001890,1.18e-15,39;UBERON:0006240,1.18e-15,39;UBERON:0003056,1.05e-14,49;UBERON:0010314,2.10e-11,92;UBERON:0000956,2.17e-11,21;UBERON:0001869,2.17e-11,21;UBERON:0000203,2.17e-11,21;UBERON:0003076,3.57e-09,12;UBERON:0003057,3.57e-09,12;UBERON:0002619,3.59e-09,17;UBERON:0000025,9.62e-08,114|phase1_expression=0.640595388419176,1.39590163055744,0.909998478779072,1.51232105653415,0.500895729946347,1.00727563147134,1.63528848416868,0.645616617207881,0.422366166455,0.468129052643987,0.513653904676515,0.717949430958028,0.342401459862411,0.524522414513984,0.333109761815663,1.01237633694913,1.39912375625629,0.315462165358238,0.685572168028694,0.42438965179803,1.53077922271926,0.595745707205312,0.783599367416806,0.95995453676044,2.75291137280604,0,1.29228598847722,0.430942465371778,1.14014051673824,1.00812051903972,0.886922042621219,0,0,0,0,0,0,1.25559489221072,2.3440060335714,0.523523743973798,0.588231488031014,1.36609096991689,1.45653105909346,1.51076181570693,0.709638518536602,1.46837401729345,2.34717403304412,1.96222640742402,1.5378032791413,1.1665793944457,0.699932108126813,0,0.335565212115473,0,1.00828139742739,1.02903774414379,1.43266719969378,1.03134418455488,3.23706337375356,5.81890077199236,0.633831403506179,1.0165335962074,1.77858959222228,0.899899717281399,0,2.1314403448383,0,0,1.55534418462716,3.37514845829227,2.3135745748652,2.57085885963423,4.63823935998388,2.57230678351403,1.72521847832825,1.83843757322004,5.50579404996943,2.042997409363,4.30098293117482,2.90149833006426,4.20843160571084,3.12548022334056,2.23346399201105,2.8138130501584,1.83357897332172,3.83017161115768,3.84403538157578,3.54158947068071,1.74170244666323,1.13357340160178,0.579728977403356,0,1.3599426674155,0.539703191637817,1.29955283489534,0,0.561777680527007,1.02258193546835,0.519572009205738,0,1.12674735821344,1.28326477414318,0,0,0.216491041011214,1.01343946190039,0,0.91347103775248,1.29468941823586,2.3750742250372,0.693941307064543,1.52232739156071,0.922461989024234,0.904335843315735,0.823120949949934,0.502666365318702,0.988779870937496,1.44599356919912,0,0.647067399789637,1.32504911076236,0.484875253135222,1.86391761218122,2.04946557908083,2.72280718857492,0.510914110417183,1.31796636956512,0.599902730993408,0.762421362438388,1.49790639404823,1.83000241127451,1.88481528169297,2.9550134432687,1.79000820131231,1.87009240103604,2.10913641988085,0.509196819251581,0.373220911830279,0.758168275301024,0.420883711772948,1.17108398666433,0.229902104433473,0.900310649026746,1.05493372485001,1.7009124787832,1.1530234825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| ||
|EntrezGene=210376 | |||
|HGNC= | |||
|UniProt=Q9Z2D0 | |||
|association_with_transcript=-46bp_to_ENSMUST00000058679,NM_177594,uc007uht.1_5end | |||
|description=CAGE_peak_3_at_Mtmr9_5end | |||
|id=chr14:64162836..64162851,- | |||
|ontology_enrichment_celltype=CL:0000117!2.58e-12!23;CL:0000337!2.58e-12!23;CL:0000393!3.21e-08!39;CL:0000211!3.21e-08!39;CL:0000540!4.84e-08!33;CL:0000047!4.84e-08!33;CL:0000031!4.84e-08!33;CL:0000404!4.84e-08!33;CL:0000221!6.82e-07!44;CL:0000133!6.82e-07!44;CL:0002319!7.18e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.02e-14,23;CL:0000337,4.02e-14,23;CL:0000540,5.11e-10,33;CL:0000047,5.11e-10,33;CL:0000031,5.11e-10,33;CL:0000404,5.11e-10,33;CL:0000393,5.17e-10,39;CL:0000211,5.17e-10,39;CL:0000221,2.11e-09,44;CL:0000133,2.11e-09,44;CL:0002319,2.17e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.97e-21!52;UBERON:0005068!1.97e-21!52;UBERON:0006241!1.97e-21!52;UBERON:0007135!1.97e-21!52;UBERON:0002616!1.99e-19!49;UBERON:0000955!2.17e-18!50;UBERON:0006238!2.17e-18!50;UBERON:0002020!3.63e-17!34;UBERON:0002346!6.43e-17!71;UBERON:0003075!6.43e-17!71;UBERON:0007284!6.43e-17!71;UBERON:0000073!3.36e-16!75;UBERON:0001016!3.36e-16!75;UBERON:0001017!8.48e-16!73;UBERON:0005743!8.48e-16!73;UBERON:0000033!1.42e-15!63;UBERON:0003080!2.42e-14!40;UBERON:0002780!4.16e-14!39;UBERON:0001890!4.16e-14!39;UBERON:0006240!4.16e-14!39;UBERON:0002791!6.34e-14!29;UBERON:0003528!6.34e-14!29;UBERON:0001893!6.34e-14!29;UBERON:0003056!3.74e-13!49;UBERON:0004121!4.17e-13!102;UBERON:0000924!4.17e-13!102;UBERON:0006601!4.17e-13!102;UBERON:0000956!6.44e-10!21;UBERON:0001869!6.44e-10!21;UBERON:0000203!6.44e-10!21;UBERON:0007811!1.75e-09!86;UBERON:0000153!2.86e-09!94;UBERON:0003076!4.95e-08!12;UBERON:0003057!4.95e-08!12;UBERON:0002619!4.97e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.05e-26,54;UBERON:0001049,3.34e-24,52;UBERON:0005068,3.34e-24,52;UBERON:0006241,3.34e-24,52;UBERON:0007135,3.34e-24,52;UBERON:0002346,4.58e-21,64;UBERON:0003075,4.58e-21,64;UBERON:0007284,4.58e-21,64;UBERON:0001016,1.83e-20,75;UBERON:0001017,5.50e-20,73;UBERON:0002020,6.44e-20,34;UBERON:0002616,1.15e-19,46;UBERON:0000955,8.26e-19,47;UBERON:0006238,8.26e-19,47;UBERON:0010371,8.18e-18,73;UBERON:0004121,1.64e-16,95;UBERON:0000924,1.64e-16,95;UBERON:0006601,1.64e-16,95;UBERON:0003528,4.22e-16,29;UBERON:0002791,4.22e-16,29;UBERON:0001893,4.22e-16,29;UBERON:0003080,6.23e-16,40;UBERON:0002780,1.18e-15,39;UBERON:0001890,1.18e-15,39;UBERON:0006240,1.18e-15,39;UBERON:0003056,1.05e-14,49;UBERON:0010314,2.10e-11,92;UBERON:0000956,2.17e-11,21;UBERON:0001869,2.17e-11,21;UBERON:0000203,2.17e-11,21;UBERON:0003076,3.57e-09,12;UBERON:0003057,3.57e-09,12;UBERON:0002619,3.59e-09,17;UBERON:0000025,9.62e-08,114 | |||
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| |||
|short_description=p3@Mtmr9 | |||
}} |
Revision as of 02:45, 13 September 2013
Short description: | p3@Mtmr9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mtmr9_5end |
Coexpression cluster: | NA |
Association with transcript: | -46bp_to_ENSMUST00000058679, NM_177594, uc007uht.1_5end |
EntrezGene: | Mtmr9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.02e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.02e-14 | 23 |
neuron | 5.11e-10 | 33 |
neuronal stem cell | 5.11e-10 | 33 |
neuroblast | 5.11e-10 | 33 |
electrically signaling cell | 5.11e-10 | 33 |
electrically responsive cell | 5.17e-10 | 39 |
electrically active cell | 5.17e-10 | 39 |
ectodermal cell | 2.11e-09 | 44 |
neurectodermal cell | 2.11e-09 | 44 |
neural cell | 2.17e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 8.05e-26 | 54 |
neural tube | 3.34e-24 | 52 |
neural rod | 3.34e-24 | 52 |
future spinal cord | 3.34e-24 | 52 |
neural keel | 3.34e-24 | 52 |
neurectoderm | 4.58e-21 | 64 |
neural plate | 4.58e-21 | 64 |
presumptive neural plate | 4.58e-21 | 64 |
nervous system | 1.83e-20 | 75 |
central nervous system | 5.50e-20 | 73 |
gray matter | 6.44e-20 | 34 |
regional part of brain | 1.15e-19 | 46 |
brain | 8.26e-19 | 47 |
future brain | 8.26e-19 | 47 |
ecto-epithelium | 8.18e-18 | 73 |
ectoderm-derived structure | 1.64e-16 | 95 |
ectoderm | 1.64e-16 | 95 |
presumptive ectoderm | 1.64e-16 | 95 |
brain grey matter | 4.22e-16 | 29 |
regional part of telencephalon | 4.22e-16 | 29 |
telencephalon | 4.22e-16 | 29 |
anterior neural tube | 6.23e-16 | 40 |
regional part of forebrain | 1.18e-15 | 39 |
forebrain | 1.18e-15 | 39 |
future forebrain | 1.18e-15 | 39 |
pre-chordal neural plate | 1.05e-14 | 49 |
structure with developmental contribution from neural crest | 2.10e-11 | 92 |
cerebral cortex | 2.17e-11 | 21 |
cerebral hemisphere | 2.17e-11 | 21 |
pallium | 2.17e-11 | 21 |
posterior neural tube | 3.57e-09 | 12 |
chordal neural plate | 3.57e-09 | 12 |
regional part of cerebral cortex | 3.59e-09 | 17 |
tube | 9.62e-08 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.