FFCP PHASE1:Mm9::chr19:6235804..6235860,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=225849|HGNC=|MCL_coexpression_id=1|UniProt=Q6PD28|association_with_transcript=0bp_to_ENSMUST00000148693,NM_198168,uc008ght.1_5end|description=CAGE_peak_1_at_Ppp2r5b_5end|id=chr19:6235804..6235860,-|ontology_enrichment_celltype=CL:0002319!3.92e-18!43;CL:0000221!1.33e-17!44;CL:0000133!1.33e-17!44;CL:0000055!1.35e-16!50;CL:0000540!1.89e-14!33;CL:0000047!1.89e-14!33;CL:0000031!1.89e-14!33;CL:0000404!1.89e-14!33;CL:0000393!1.36e-13!39;CL:0000211!1.36e-13!39;CL:0000117!1.15e-12!23;CL:0000337!1.15e-12!23;CL:0002321!1.74e-10!70;CL:0000220!1.74e-10!70|ontology_enrichment_celltype_v019_2=CL:0002319,3.92e-18,43;CL:0000221,1.33e-17,44;CL:0000133,1.33e-17,44;CL:0000540,1.89e-14,33;CL:0000047,1.89e-14,33;CL:0000031,1.89e-14,33;CL:0000404,1.89e-14,33;CL:0000393,1.36e-13,39;CL:0000211,1.36e-13,39;CL:0000117,1.15e-12,23;CL:0000337,1.15e-12,23;CL:0002321,1.74e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.90e-34!75;UBERON:0001016!3.90e-34!75;UBERON:0001017!1.30e-33!73;UBERON:0005743!1.30e-33!73;UBERON:0004121!1.13e-31!102;UBERON:0000924!1.13e-31!102;UBERON:0006601!1.13e-31!102;UBERON:0002346!6.81e-26!71;UBERON:0003075!6.81e-26!71;UBERON:0007284!6.81e-26!71;UBERON:0001049!1.38e-24!52;UBERON:0005068!1.38e-24!52;UBERON:0006241!1.38e-24!52;UBERON:0007135!1.38e-24!52;UBERON:0000955!2.63e-23!50;UBERON:0006238!2.63e-23!50;UBERON:0002616!9.71e-23!49;UBERON:0000033!3.88e-21!63;UBERON:0002020!4.60e-19!34;UBERON:0003080!4.49e-17!40;UBERON:0002780!1.60e-16!39;UBERON:0001890!1.60e-16!39;UBERON:0006240!1.60e-16!39;UBERON:0003056!4.18e-16!49;UBERON:0002791!6.44e-16!29;UBERON:0003528!6.44e-16!29;UBERON:0001893!6.44e-16!29;UBERON:0000956!1.35e-11!21;UBERON:0001869!1.35e-11!21;UBERON:0000203!1.35e-11!21;UBERON:0002619!4.19e-10!17;UBERON:0003076!3.34e-08!12;UBERON:0003057!3.34e-08!12;UBERON:0002021!1.63e-07!10;UBERON:0000411!1.63e-07!10;UBERON:0001950!1.63e-07!10;UBERON:0007811!8.83e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.90e-34,75;UBERON:0001017,1.30e-33,73;UBERON:0004121,7.35e-30,95;UBERON:0000924,7.35e-30,95;UBERON:0006601,7.35e-30,95;UBERON:0000073,4.23e-26,54;UBERON:0001049,1.38e-24,52;UBERON:0005068,1.38e-24,52;UBERON:0006241,1.38e-24,52;UBERON:0007135,1.38e-24,52;UBERON:0002346,1.57e-24,64;UBERON:0003075,1.57e-24,64;UBERON:0007284,1.57e-24,64;UBERON:0010314,6.03e-22,92;UBERON:0010371,1.93e-21,73;UBERON:0000955,3.67e-21,47;UBERON:0006238,3.67e-21,47;UBERON:0002616,1.32e-20,46;UBERON:0002020,4.59e-19,34;UBERON:0003080,4.49e-17,40;UBERON:0002780,1.60e-16,39;UBERON:0001890,1.60e-16,39;UBERON:0006240,1.60e-16,39;UBERON:0003056,4.18e-16,49;UBERON:0003528,6.44e-16,29;UBERON:0002791,6.44e-16,29;UBERON:0001893,6.44e-16,29;UBERON:0000956,1.35e-11,21;UBERON:0001869,1.35e-11,21;UBERON:0000203,1.35e-11,21;UBERON:0002619,4.19e-10,17;UBERON:0003076,3.34e-08,12;UBERON:0003057,3.34e-08,12;UBERON:0002021,1.63e-07,10;UBERON:0000411,1.63e-07,10;UBERON:0001950,1.63e-07,10|phase1_expression=26.2644109251862,70.4930323431509,76.8948714568316,73.8012675588665,72.128985112274,33.7437336542898,26.8654536684855,11.6210991097419,3.51971805379167,4.68129052643987,0.171217968225505,0.8774937489487,9.58724087614752,10.8401298999557,61.6253059358976,68.0316898429815,74.8531209597117,9.30613387806801,8.08975158273859,13.580468857537,43.7972944278009,5.36171136484781,2.61199789138935,30.0785754851605,28.2173415712619,52.8293406985819,32.7379117080897,28.8731451799091,26.2232318849796,24.6989527164732,23.7251646401176,10.1604907753541,15.3766196896143,31.6963362030877,2.59966457776147,4.3221007793208,4.28755648150975,8.37063261473815,7.0320181007142,4.71171369576418,8.82347232046521,10.2456822743767,11.1667381197165,26.0606413209445,25.5469866673177,27.1649193199289,100.146092076549,70.8581758236451,74.4736159469859,83.021566904719,43.3957907038624,57.5010257459886,7.21465206048266,12.3311564141929,11.4271891708438,34.9872833008888,44.1261497505685,41.2537673821954,108.441623020744,116.378015439847,121.06179806968,47.4382344896785,50.6898033783349,49.9444343091176,45.4878526780808,56.1279290807419,76.0984280716748,109.886435321965,60.347354363534,61.4277019409192,61.4148887146035,162.535410125764,138.926312258565,65.6550683792154,53.8651547122488,70.7798465689716,154.162233399144,158.587673901803,138.245879930619,108.014869651029,105.851203647988,100.536280517455,135.40375451567,100.734507195671,125.447361424761,132.288234877677,118.168495063255,116.126854749162,37.7116442799257,59.0969600035063,23.1891590961342,16.3480536626463,29.2387673494333,21.0484244738749,21.4426217757731,11.2006721774334,37.6391045953095,29.8253064511601,27.5373164879041,31.8005617059306,22.8166340038222,20.5322363862909,20.3844191765317,21.3320010945999,11.9070072556168,14.1881524666055,10.1104889002957,26.2622923353838,19.4203412735379,78.2290072871627,26.3697696684527,40.4939086155148,41.7414050033466,37.6806601381556,40.4505152546825,67.1059597700467,20.517182321953,40.3432205806553,45.999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| ||
|EntrezGene=225849 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q6PD28 | |||
|association_with_transcript=0bp_to_ENSMUST00000148693,NM_198168,uc008ght.1_5end | |||
|description=CAGE_peak_1_at_Ppp2r5b_5end | |||
|id=chr19:6235804..6235860,- | |||
|ontology_enrichment_celltype=CL:0002319!3.92e-18!43;CL:0000221!1.33e-17!44;CL:0000133!1.33e-17!44;CL:0000055!1.35e-16!50;CL:0000540!1.89e-14!33;CL:0000047!1.89e-14!33;CL:0000031!1.89e-14!33;CL:0000404!1.89e-14!33;CL:0000393!1.36e-13!39;CL:0000211!1.36e-13!39;CL:0000117!1.15e-12!23;CL:0000337!1.15e-12!23;CL:0002321!1.74e-10!70;CL:0000220!1.74e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.92e-18,43;CL:0000221,1.33e-17,44;CL:0000133,1.33e-17,44;CL:0000540,1.89e-14,33;CL:0000047,1.89e-14,33;CL:0000031,1.89e-14,33;CL:0000404,1.89e-14,33;CL:0000393,1.36e-13,39;CL:0000211,1.36e-13,39;CL:0000117,1.15e-12,23;CL:0000337,1.15e-12,23;CL:0002321,1.74e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.90e-34!75;UBERON:0001016!3.90e-34!75;UBERON:0001017!1.30e-33!73;UBERON:0005743!1.30e-33!73;UBERON:0004121!1.13e-31!102;UBERON:0000924!1.13e-31!102;UBERON:0006601!1.13e-31!102;UBERON:0002346!6.81e-26!71;UBERON:0003075!6.81e-26!71;UBERON:0007284!6.81e-26!71;UBERON:0001049!1.38e-24!52;UBERON:0005068!1.38e-24!52;UBERON:0006241!1.38e-24!52;UBERON:0007135!1.38e-24!52;UBERON:0000955!2.63e-23!50;UBERON:0006238!2.63e-23!50;UBERON:0002616!9.71e-23!49;UBERON:0000033!3.88e-21!63;UBERON:0002020!4.60e-19!34;UBERON:0003080!4.49e-17!40;UBERON:0002780!1.60e-16!39;UBERON:0001890!1.60e-16!39;UBERON:0006240!1.60e-16!39;UBERON:0003056!4.18e-16!49;UBERON:0002791!6.44e-16!29;UBERON:0003528!6.44e-16!29;UBERON:0001893!6.44e-16!29;UBERON:0000956!1.35e-11!21;UBERON:0001869!1.35e-11!21;UBERON:0000203!1.35e-11!21;UBERON:0002619!4.19e-10!17;UBERON:0003076!3.34e-08!12;UBERON:0003057!3.34e-08!12;UBERON:0002021!1.63e-07!10;UBERON:0000411!1.63e-07!10;UBERON:0001950!1.63e-07!10;UBERON:0007811!8.83e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.90e-34,75;UBERON:0001017,1.30e-33,73;UBERON:0004121,7.35e-30,95;UBERON:0000924,7.35e-30,95;UBERON:0006601,7.35e-30,95;UBERON:0000073,4.23e-26,54;UBERON:0001049,1.38e-24,52;UBERON:0005068,1.38e-24,52;UBERON:0006241,1.38e-24,52;UBERON:0007135,1.38e-24,52;UBERON:0002346,1.57e-24,64;UBERON:0003075,1.57e-24,64;UBERON:0007284,1.57e-24,64;UBERON:0010314,6.03e-22,92;UBERON:0010371,1.93e-21,73;UBERON:0000955,3.67e-21,47;UBERON:0006238,3.67e-21,47;UBERON:0002616,1.32e-20,46;UBERON:0002020,4.59e-19,34;UBERON:0003080,4.49e-17,40;UBERON:0002780,1.60e-16,39;UBERON:0001890,1.60e-16,39;UBERON:0006240,1.60e-16,39;UBERON:0003056,4.18e-16,49;UBERON:0003528,6.44e-16,29;UBERON:0002791,6.44e-16,29;UBERON:0001893,6.44e-16,29;UBERON:0000956,1.35e-11,21;UBERON:0001869,1.35e-11,21;UBERON:0000203,1.35e-11,21;UBERON:0002619,4.19e-10,17;UBERON:0003076,3.34e-08,12;UBERON:0003057,3.34e-08,12;UBERON:0002021,1.63e-07,10;UBERON:0000411,1.63e-07,10;UBERON:0001950,1.63e-07,10 | |||
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| |||
|short_description=p1@Ppp2r5b | |||
}} |
Revision as of 18:20, 13 September 2013
Short description: | p1@Ppp2r5b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ppp2r5b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000148693, NM_198168, uc008ght.1_5end |
EntrezGene: | Ppp2r5b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.92e-18 | 43 |
ectodermal cell | 1.33e-17 | 44 |
neurectodermal cell | 1.33e-17 | 44 |
neuron | 1.89e-14 | 33 |
neuronal stem cell | 1.89e-14 | 33 |
neuroblast | 1.89e-14 | 33 |
electrically signaling cell | 1.89e-14 | 33 |
electrically responsive cell | 1.36e-13 | 39 |
electrically active cell | 1.36e-13 | 39 |
CNS neuron (sensu Vertebrata) | 1.15e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-12 | 23 |
embryonic cell | 1.74e-10 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.