FFCP PHASE1:Hg19::chr7:11871574..11871633,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=221981|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=22207|TSSclassifier=W|UniProt=C9JL67,Q9UPZ6|association_with_transcript=190bp_to_ENST00000262042,ENST00000423059,NM_015204,uc003ssf.3_5end|coexpression_cluster_id=C428|description=CAGE_peak_3_at_THSD7A_5end|id=chr7:11871574..11871633,-|ontology_enrichment_celltype=CL:0002139!2.69e-27!24;CL:0000115!5.23e-26!35;CL:0000071!6.08e-21!18;CL:0002546!6.08e-21!18;CL:0002078!1.32e-19!44;CL:0000213!1.94e-12!57;CL:0000215!1.94e-12!57;CL:1000413!3.15e-11!9;CL:0002544!3.71e-08!6;CL:0002543!4.52e-08!6;CL:0005020!6.76e-08!6;CL:0002138!6.76e-08!6;CL:0005022!6.76e-08!6|ontology_enrichment_celltype_v019=CL:0002139;1.01e-41;24!CL:0000071;9.40e-32;18!CL:0000115;1.95e-31;36!CL:0002078;2.82e-20;45!CL:1000413;1.23e-16;9!CL:0000213;7.91e-14;58!CL:0000215;7.91e-14;58!CL:0002544;7.10e-12;6!CL:0002543;1.27e-11;6!CL:0002138;1.86e-11;6!CL:0002144;9.56e-07;3!CL:0002618;9.65e-07;3|ontology_enrichment_celltype_v019_2=CL:0002139,9.77e-42,24;CL:0000115,9.21e-38,36;CL:0000071,8.61e-32,18;CL:0002546,8.61e-32,18;CL:0002078,3.16e-30,45;CL:0000213,3.51e-21,58;CL:0000215,3.51e-21,58;CL:1000413,1.29e-16,9;CL:0002544,7.74e-12,6;CL:0002543,1.05e-11,6;CL:0005020,1.97e-11,6;CL:0002138,1.97e-11,6;CL:0005022,1.97e-11,6;CL:0002618,8.54e-07,3|ontology_enrichment_development_v019=CL:0002546;9.40e-32;18!CL:0005022;1.86e-11;6!UBERON:0004872;1.76e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.20e-62!115;UBERON:0004111!4.68e-31!241;UBERON:0001049!2.03e-29!57;UBERON:0005068!2.03e-29!57;UBERON:0006241!2.03e-29!57;UBERON:0007135!2.03e-29!57;UBERON:0000477!3.52e-29!286;UBERON:0000025!3.14e-28!194;UBERON:0002616!1.63e-25!59;UBERON:0003075!1.61e-24!86;UBERON:0007284!1.61e-24!86;UBERON:0001017!1.15e-23!82;UBERON:0003080!2.48e-23!42;UBERON:0005743!7.34e-23!86;UBERON:0002346!1.51e-22!90;UBERON:0002780!2.47e-22!41;UBERON:0001890!2.47e-22!41;UBERON:0006240!2.47e-22!41;UBERON:0000073!9.82e-22!94;UBERON:0001016!9.82e-22!94;UBERON:0000955!2.88e-21!69;UBERON:0006238!2.88e-21!69;UBERON:0001986!6.08e-21!18;UBERON:0004638!6.08e-21!18;UBERON:0004852!6.08e-21!18;UBERON:0002020!1.83e-18!34;UBERON:0003528!1.83e-18!34;UBERON:0001893!3.17e-18!34;UBERON:0000483!4.75e-18!309;UBERON:0002791!1.08e-17!33;UBERON:0000119!1.57e-17!312;UBERON:0001869!5.94e-17!32;UBERON:0000487!9.01e-16!22;UBERON:0003056!9.15e-16!61;UBERON:0006914!1.25e-14!25;UBERON:0002619!1.40e-14!22;UBERON:0000153!1.22e-13!129;UBERON:0007811!1.22e-13!129;UBERON:0001950!3.22e-13!20;UBERON:0000033!2.14e-12!123;UBERON:0004121!2.19e-12!169;UBERON:0000468!2.73e-12!659;UBERON:0000467!3.47e-12!625;UBERON:0000956!4.31e-12!25;UBERON:0000203!4.31e-12!25;UBERON:0000480!4.41e-12!626;UBERON:0000924!1.26e-11!173;UBERON:0006601!1.26e-11!173;UBERON:0003915!3.15e-11!9;UBERON:0004700!3.15e-11!9;UBERON:0001917!3.15e-11!9;UBERON:0001009!9.49e-10!113;UBERON:0000064!1.05e-09!219;UBERON:0000055!1.18e-09!69;UBERON:0000922!1.33e-09!612;UBERON:0002049!2.78e-09!79;UBERON:0007798!2.78e-09!79;UBERON:0004872!3.79e-09!84;UBERON:0000481!1.39e-08!347;UBERON:0002050!1.39e-08!605;UBERON:0005423!1.39e-08!605;UBERON:0004535!1.91e-08!110;UBERON:0002420!2.83e-08!9;UBERON:0007245!2.83e-08!9;UBERON:0010009!2.83e-08!9;UBERON:0010011!2.83e-08!9;UBERON:0000454!2.83e-08!9;UBERON:0000923!3.31e-08!604;UBERON:0005291!3.31e-08!604;UBERON:0006598!3.31e-08!604;UBERON:0002532!3.31e-08!604;UBERON:0002308!3.60e-08!9;UBERON:0000125!3.60e-08!9;UBERON:0003914!9.69e-08!118;UBERON:0003103!1.37e-07!69;UBERON:0002298!1.98e-07!8;UBERON:0003076!2.69e-07!15;UBERON:0003057!2.69e-07!15;UBERON:0009663!5.37e-07!7;UBERON:0001981!5.44e-07!60;UBERON:0007500!5.44e-07!60;UBERON:0004537!5.44e-07!60;UBERON:0006965!5.44e-07!60|ontology_enrichment_uberon_v019=UBERON:0004638;9.40e-32;18!UBERON:0001986;9.40e-32;18!UBERON:0004852;9.40e-32;18!UBERON:0000487;7.42e-25;22!UBERON:0006914;2.19e-23;25!UBERON:0003915;1.23e-16;9!UBERON:0004700;1.23e-16;9!UBERON:0001917;1.23e-16;9!UBERON:0000490;1.54e-13;33!UBERON:0001638;1.56e-09;9!UBERON:0003920;1.56e-09;9!UBERON:0004582;1.56e-09;9!UBERON:0000055;2.71e-09;65!UBERON:0007023;3.90e-09;114!UBERON:0001473;2.55e-08;8!UBERON:0004536;2.55e-08;8!UBERON:0006558;2.55e-08;8!UBERON:0009663;6.69e-08;7!UBERON:0002420;7.21e-08;9!UBERON:0000125;7.21e-08;9!UBERON:0007245;7.21e-08;9!UBERON:0002308;7.21e-08;9!UBERON:0010009;7.21e-08;9!UBERON:0010011;7.21e-08;9!UBERON:0000454;7.21e-08;9!UBERON:0000922;6.66e-07;49!UBERON:0010523;9.56e-07;3!UBERON:0001915;9.56e-07;3!UBERON:0001982;9.56e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.55e-39,114;UBERON:0004638,8.61e-32,18;UBERON:0001986,8.61e-32,18;UBERON:0004852,8.61e-32,18;UBERON:0000487,6.92e-25,22;UBERON:0006914,1.57e-23,25;UBERON:0004111,9.44e-23,240;UBERON:0000025,2.04e-20,192;UBERON:0000055,1.61e-17,68;UBERON:0003915,1.29e-16,9;UBERON:0004700,1.29e-16,9;UBERON:0001917,1.29e-16,9;UBERON:0004872,3.61e-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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221981 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22207 | |||
|TSSclassifier=W | |||
|UniProt=C9JL67,Q9UPZ6 | |||
|association_with_transcript=190bp_to_ENST00000262042,ENST00000423059,NM_015204,uc003ssf.3_5end | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_3_at_THSD7A_5end | |||
|id=chr7:11871574..11871633,- | |||
|ontology_enrichment_celltype=CL:0002139!2.69e-27!24;CL:0000115!5.23e-26!35;CL:0000071!6.08e-21!18;CL:0002546!6.08e-21!18;CL:0002078!1.32e-19!44;CL:0000213!1.94e-12!57;CL:0000215!1.94e-12!57;CL:1000413!3.15e-11!9;CL:0002544!3.71e-08!6;CL:0002543!4.52e-08!6;CL:0005020!6.76e-08!6;CL:0002138!6.76e-08!6;CL:0005022!6.76e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.01e-41;24!CL:0000071;9.40e-32;18!CL:0000115;1.95e-31;36!CL:0002078;2.82e-20;45!CL:1000413;1.23e-16;9!CL:0000213;7.91e-14;58!CL:0000215;7.91e-14;58!CL:0002544;7.10e-12;6!CL:0002543;1.27e-11;6!CL:0002138;1.86e-11;6!CL:0002144;9.56e-07;3!CL:0002618;9.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,9.77e-42,24;CL:0000115,9.21e-38,36;CL:0000071,8.61e-32,18;CL:0002546,8.61e-32,18;CL:0002078,3.16e-30,45;CL:0000213,3.51e-21,58;CL:0000215,3.51e-21,58;CL:1000413,1.29e-16,9;CL:0002544,7.74e-12,6;CL:0002543,1.05e-11,6;CL:0005020,1.97e-11,6;CL:0002138,1.97e-11,6;CL:0005022,1.97e-11,6;CL:0002618,8.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;9.40e-32;18!CL:0005022;1.86e-11;6!UBERON:0004872;1.76e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@THSD7A | |||
}} |
Revision as of 22:54, 13 September 2013
Short description: | p3@THSD7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_THSD7A_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 190bp_to_ENST00000262042, ENST00000423059, NM_015204, uc003ssf.3_5end |
EntrezGene: | THSD7A |
HGNC: | 22207 |
UniProt: | C9JL67Q9UPZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 9.77e-42 | 24 |
endothelial cell | 9.21e-38 | 36 |
blood vessel endothelial cell | 8.61e-32 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.61e-32 | 18 |
meso-epithelial cell | 3.16e-30 | 45 |
lining cell | 3.51e-21 | 58 |
barrier cell | 3.51e-21 | 58 |
endothelial cell of artery | 1.29e-16 | 9 |
aortic endothelial cell | 7.74e-12 | 6 |
vein endothelial cell | 1.05e-11 | 6 |
lymphangioblast | 1.97e-11 | 6 |
endothelial cell of lymphatic vessel | 1.97e-11 | 6 |
vascular lymphangioblast | 1.97e-11 | 6 |
endothelial cell of umbilical vein | 8.54e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.