FFCP PHASE1:Mm9::chr3:86724465..86724487,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=70762|HGNC=|MCL_coexpression_id=22|UniProt=Q6PGN3|association_with_transcript=-208bp_to_ENSMUST00000098983_5end|description=CAGE_peak_5_at_Dclk2_5end|id=chr3:86724465..86724487,-|ontology_enrichment_celltype=CL:0000117!2.00e-15!23;CL:0000337!2.00e-15!23;CL:0000540!2.13e-14!33;CL:0000047!2.13e-14!33;CL:0000031!2.13e-14!33;CL:0000404!2.13e-14!33;CL:0002319!3.99e-13!43;CL:0000221!8.15e-13!44;CL:0000133!8.15e-13!44;CL:0000393!3.36e-11!39;CL:0000211!3.36e-11!39;CL:0000055!4.58e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.50e-29,23;CL:0000337,2.50e-29,23;CL:0000540,1.37e-21,33;CL:0000047,1.37e-21,33;CL:0000031,1.37e-21,33;CL:0000404,1.37e-21,33;CL:0000393,4.67e-17,39;CL:0000211,4.67e-17,39;CL:0002319,3.82e-16,43;CL:0000221,1.35e-15,44;CL:0000133,1.35e-15,44;CL:0002609,3.28e-08,6;CL:0002321,4.59e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.21e-23!75;UBERON:0001016!1.21e-23!75;UBERON:0001017!4.82e-23!73;UBERON:0005743!4.82e-23!73;UBERON:0004121!1.11e-20!102;UBERON:0000924!1.11e-20!102;UBERON:0006601!1.11e-20!102;UBERON:0002346!1.69e-20!71;UBERON:0003075!1.69e-20!71;UBERON:0007284!1.69e-20!71;UBERON:0007811!3.93e-19!86;UBERON:0001049!4.87e-19!52;UBERON:0005068!4.87e-19!52;UBERON:0006241!4.87e-19!52;UBERON:0007135!4.87e-19!52;UBERON:0000033!4.75e-18!63;UBERON:0000955!1.97e-17!50;UBERON:0006238!1.97e-17!50;UBERON:0002616!1.05e-16!49;UBERON:0003056!1.83e-16!49;UBERON:0000153!1.53e-15!94;UBERON:0002020!3.69e-15!34;UBERON:0003080!4.60e-14!40;UBERON:0002780!1.84e-13!39;UBERON:0001890!1.84e-13!39;UBERON:0006240!1.84e-13!39;UBERON:0002791!9.47e-12!29;UBERON:0003528!9.47e-12!29;UBERON:0001893!9.47e-12!29;UBERON:0000956!1.44e-07!21;UBERON:0001869!1.44e-07!21;UBERON:0000203!1.44e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.83e-24,54;UBERON:0001017,2.06e-23,73;UBERON:0001016,1.86e-22,75;UBERON:0002020,2.02e-21,34;UBERON:0001049,5.72e-21,52;UBERON:0005068,5.72e-21,52;UBERON:0006241,5.72e-21,52;UBERON:0007135,5.72e-21,52;UBERON:0002346,2.00e-20,64;UBERON:0003075,2.00e-20,64;UBERON:0007284,2.00e-20,64;UBERON:0004121,1.23e-19,95;UBERON:0000924,1.23e-19,95;UBERON:0006601,1.23e-19,95;UBERON:0000955,4.92e-17,47;UBERON:0006238,4.92e-17,47;UBERON:0010371,1.45e-16,73;UBERON:0002616,6.85e-16,46;UBERON:0003056,1.41e-15,49;UBERON:0003528,3.25e-15,29;UBERON:0002791,3.25e-15,29;UBERON:0001893,3.25e-15,29;UBERON:0003080,1.24e-14,40;UBERON:0002780,1.19e-13,39;UBERON:0001890,1.19e-13,39;UBERON:0006240,1.19e-13,39;UBERON:0010314,5.57e-11,92;UBERON:0002420,9.40e-09,8;UBERON:0007245,9.40e-09,8;UBERON:0010009,9.40e-09,8;UBERON:0010011,9.40e-09,8;UBERON:0000454,9.40e-09,8;UBERON:0000956,1.64e-08,21;UBERON:0001869,1.64e-08,21;UBERON:0000203,1.64e-08,21;UBERON:0001948,2.24e-08,5;UBERON:0002315,2.24e-08,5;UBERON:0003076,3.64e-07,12;UBERON:0003057,3.64e-07,12;UBERON:0002240,7.63e-07,6;UBERON:0005174,7.63e-07,6;UBERON:0001137,7.63e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,1.16210991097419,0.140788722151667,0,0.171217968225505,0.398860794976682,0,0.961624426608971,0.333109761815663,0.202475267389826,0.699561878128147,0.788655413395594,0.822686601634433,1.27316895539409,0.510259740906419,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0,1.52617609466313,0.219686182734472,0.194429899074283,0.279972843250725,0,0.335565212115473,0,0.336093799142464,0,0,0,6.67644320836673,12.1667925232568,5.07065122804943,0,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,1.24427534770173,1.35005938331691,2.10324961351382,4.85606673486466,4.19650227808066,3.55223317723367,4.79227355091182,5.51531271966013,1.10115880999389,1.14918604276669,1.53606533256243,6.59431438650969,8.14240028061446,4.68822033501084,3.35019598801657,1.12552522006336,2.13917546887534,3.83017161115768,3.55929201997757,8.38797506213853,0.757261933331841,0.831287161174641,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,2.92780797011547,2.51336048176146,0,0,0,0.127070227073065,2.39665023047716,0.457500602818626,5.78010019719176,1.91206752211504,2.04572365864264,2.70124457927428,2.10913641988085,0.305518091550949,0,0,0.420883711772948,0.130120442962704,0.919608417733892,0.720248519221397,1.35634336052144,2.9255694635071,1.5373646434182,1.78033276663485,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0,0,1.89260953707715,3.39585220851639,0,0,0.213288250535234,0,0.515469845288373,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0.642202359951168,0.820481806145422,0,0,0.94652465824877,0.780877488593277,0.215423397732799,0.238968797952552,1.33679204449436,1.41538265394416,0,0.292255857911312,0.395287777946524,7.71171159412337,0,0.534196811001766,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.720244376125241,0.388076051348264,0.214337035031592,0.709360934569094,0.178368817602071,0.822745103010605,1.2178597964584,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,0.741701208042039,0.341741761595705,0,0,0,0.136694227721025,0.457556346413045,0.509935289981566,0.69975726161829,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0,0,0.165306911450672,0,0,0,1.12738587736838,0.448549638131936,0.496375471371293,1.55560950675238,0.904118764344118,0.337912250981556,0.352071715937262,0.781226309063701,1.04859344425711,0.966336483304024,0.576060012515731,1.26404448251271,0.202725215290164,0.102710957164827,0.77952493786677,0.716106782669926,0.79472541912506,0.961563596159751,1.03382669022204,1.31256384932592,1.67654974641,2.01652370273681,0.682205165178267,1.73181314952593,1.5193997283604,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,0.572895513439397,1.3748254587495,0,0.755393897389701,0.675022500231806,2.2516060161211,0.453142408984205,2.07104124700728,0.31136204275253,0.399024873401031,1.02440163452481,1.45864030240976,1.25767897576789,0.919217542250071,0.222246727801615,1.03017528619447,1.60459604795908,0.505394423527595,0.760437899670719,0.943131706930381,0.655490552289177,1.53660365771686,0.516919220600519,1.42888107384922,0.927074607558844,0.964546102318525,0.824171801606613,1.03039244094078,0.685738504770831,1.4198064492747,0.238436189947321,0.581385666529314,0.658765662907314,0.676916863133412,1.64635175585495,0.263069711437843,1.35804113845862,0.561142271657738,0.949080144993393,1.18205378850676,0.818462086339379,0.929621047115796,0.578719832943424,1.49886346762768,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0|short_description=p5@Dclk2}} | ||
|EntrezGene=70762 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=Q6PGN3 | |||
|association_with_transcript=-208bp_to_ENSMUST00000098983_5end | |||
|description=CAGE_peak_5_at_Dclk2_5end | |||
|id=chr3:86724465..86724487,- | |||
|ontology_enrichment_celltype=CL:0000117!2.00e-15!23;CL:0000337!2.00e-15!23;CL:0000540!2.13e-14!33;CL:0000047!2.13e-14!33;CL:0000031!2.13e-14!33;CL:0000404!2.13e-14!33;CL:0002319!3.99e-13!43;CL:0000221!8.15e-13!44;CL:0000133!8.15e-13!44;CL:0000393!3.36e-11!39;CL:0000211!3.36e-11!39;CL:0000055!4.58e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.50e-29,23;CL:0000337,2.50e-29,23;CL:0000540,1.37e-21,33;CL:0000047,1.37e-21,33;CL:0000031,1.37e-21,33;CL:0000404,1.37e-21,33;CL:0000393,4.67e-17,39;CL:0000211,4.67e-17,39;CL:0002319,3.82e-16,43;CL:0000221,1.35e-15,44;CL:0000133,1.35e-15,44;CL:0002609,3.28e-08,6;CL:0002321,4.59e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.21e-23!75;UBERON:0001016!1.21e-23!75;UBERON:0001017!4.82e-23!73;UBERON:0005743!4.82e-23!73;UBERON:0004121!1.11e-20!102;UBERON:0000924!1.11e-20!102;UBERON:0006601!1.11e-20!102;UBERON:0002346!1.69e-20!71;UBERON:0003075!1.69e-20!71;UBERON:0007284!1.69e-20!71;UBERON:0007811!3.93e-19!86;UBERON:0001049!4.87e-19!52;UBERON:0005068!4.87e-19!52;UBERON:0006241!4.87e-19!52;UBERON:0007135!4.87e-19!52;UBERON:0000033!4.75e-18!63;UBERON:0000955!1.97e-17!50;UBERON:0006238!1.97e-17!50;UBERON:0002616!1.05e-16!49;UBERON:0003056!1.83e-16!49;UBERON:0000153!1.53e-15!94;UBERON:0002020!3.69e-15!34;UBERON:0003080!4.60e-14!40;UBERON:0002780!1.84e-13!39;UBERON:0001890!1.84e-13!39;UBERON:0006240!1.84e-13!39;UBERON:0002791!9.47e-12!29;UBERON:0003528!9.47e-12!29;UBERON:0001893!9.47e-12!29;UBERON:0000956!1.44e-07!21;UBERON:0001869!1.44e-07!21;UBERON:0000203!1.44e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.83e-24,54;UBERON:0001017,2.06e-23,73;UBERON:0001016,1.86e-22,75;UBERON:0002020,2.02e-21,34;UBERON:0001049,5.72e-21,52;UBERON:0005068,5.72e-21,52;UBERON:0006241,5.72e-21,52;UBERON:0007135,5.72e-21,52;UBERON:0002346,2.00e-20,64;UBERON:0003075,2.00e-20,64;UBERON:0007284,2.00e-20,64;UBERON:0004121,1.23e-19,95;UBERON:0000924,1.23e-19,95;UBERON:0006601,1.23e-19,95;UBERON:0000955,4.92e-17,47;UBERON:0006238,4.92e-17,47;UBERON:0010371,1.45e-16,73;UBERON:0002616,6.85e-16,46;UBERON:0003056,1.41e-15,49;UBERON:0003528,3.25e-15,29;UBERON:0002791,3.25e-15,29;UBERON:0001893,3.25e-15,29;UBERON:0003080,1.24e-14,40;UBERON:0002780,1.19e-13,39;UBERON:0001890,1.19e-13,39;UBERON:0006240,1.19e-13,39;UBERON:0010314,5.57e-11,92;UBERON:0002420,9.40e-09,8;UBERON:0007245,9.40e-09,8;UBERON:0010009,9.40e-09,8;UBERON:0010011,9.40e-09,8;UBERON:0000454,9.40e-09,8;UBERON:0000956,1.64e-08,21;UBERON:0001869,1.64e-08,21;UBERON:0000203,1.64e-08,21;UBERON:0001948,2.24e-08,5;UBERON:0002315,2.24e-08,5;UBERON:0003076,3.64e-07,12;UBERON:0003057,3.64e-07,12;UBERON:0002240,7.63e-07,6;UBERON:0005174,7.63e-07,6;UBERON:0001137,7.63e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,1.16210991097419,0.140788722151667,0,0.171217968225505,0.398860794976682,0,0.961624426608971,0.333109761815663,0.202475267389826,0.699561878128147,0.788655413395594,0.822686601634433,1.27316895539409,0.510259740906419,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0,1.52617609466313,0.219686182734472,0.194429899074283,0.279972843250725,0,0.335565212115473,0,0.336093799142464,0,0,0,6.67644320836673,12.1667925232568,5.07065122804943,0,0.889294796111139,0,0,0,0.299600110518405,0.768436610643109,1.24427534770173,1.35005938331691,2.10324961351382,4.85606673486466,4.19650227808066,3.55223317723367,4.79227355091182,5.51531271966013,1.10115880999389,1.14918604276669,1.53606533256243,6.59431438650969,8.14240028061446,4.68822033501084,3.35019598801657,1.12552522006336,2.13917546887534,3.83017161115768,3.55929201997757,8.38797506213853,0.757261933331841,0.831287161174641,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,2.92780797011547,2.51336048176146,0,0,0,0.127070227073065,2.39665023047716,0.457500602818626,5.78010019719176,1.91206752211504,2.04572365864264,2.70124457927428,2.10913641988085,0.305518091550949,0,0,0.420883711772948,0.130120442962704,0.919608417733892,0.720248519221397,1.35634336052144,2.9255694635071,1.5373646434182,1.78033276663485,0.517406741478031,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.292399974850665,0,0,1.89260953707715,3.39585220851639,0,0,0.213288250535234,0,0.515469845288373,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.476087281772027,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0.642202359951168,0.820481806145422,0,0,0.94652465824877,0.780877488593277,0.215423397732799,0.238968797952552,1.33679204449436,1.41538265394416,0,0.292255857911312,0.395287777946524,7.71171159412337,0,0.534196811001766,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.720244376125241,0.388076051348264,0.214337035031592,0.709360934569094,0.178368817602071,0.822745103010605,1.2178597964584,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,0,0.741701208042039,0.341741761595705,0,0,0,0.136694227721025,0.457556346413045,0.509935289981566,0.69975726161829,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.418176592028937,0,0,0.165306911450672,0,0,0,1.12738587736838,0.448549638131936,0.496375471371293,1.55560950675238,0.904118764344118,0.337912250981556,0.352071715937262,0.781226309063701,1.04859344425711,0.966336483304024,0.576060012515731,1.26404448251271,0.202725215290164,0.102710957164827,0.77952493786677,0.716106782669926,0.79472541912506,0.961563596159751,1.03382669022204,1.31256384932592,1.67654974641,2.01652370273681,0.682205165178267,1.73181314952593,1.5193997283604,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,0.572895513439397,1.3748254587495,0,0.755393897389701,0.675022500231806,2.2516060161211,0.453142408984205,2.07104124700728,0.31136204275253,0.399024873401031,1.02440163452481,1.45864030240976,1.25767897576789,0.919217542250071,0.222246727801615,1.03017528619447,1.60459604795908,0.505394423527595,0.760437899670719,0.943131706930381,0.655490552289177,1.53660365771686,0.516919220600519,1.42888107384922,0.927074607558844,0.964546102318525,0.824171801606613,1.03039244094078,0.685738504770831,1.4198064492747,0.238436189947321,0.581385666529314,0.658765662907314,0.676916863133412,1.64635175585495,0.263069711437843,1.35804113845862,0.561142271657738,0.949080144993393,1.18205378850676,0.818462086339379,0.929621047115796,0.578719832943424,1.49886346762768,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0 | |||
|short_description=p5@Dclk2 | |||
}} |
Revision as of 02:42, 14 September 2013
Short description: | p5@Dclk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dclk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -208bp_to_ENSMUST00000098983_5end |
EntrezGene: | Dclk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.50e-29 | 23 |
neuroblast (sensu Vertebrata) | 2.50e-29 | 23 |
neuron | 1.37e-21 | 33 |
neuronal stem cell | 1.37e-21 | 33 |
neuroblast | 1.37e-21 | 33 |
electrically signaling cell | 1.37e-21 | 33 |
electrically responsive cell | 4.67e-17 | 39 |
electrically active cell | 4.67e-17 | 39 |
neural cell | 3.82e-16 | 43 |
ectodermal cell | 1.35e-15 | 44 |
neurectodermal cell | 1.35e-15 | 44 |
neuron of cerebral cortex | 3.28e-08 | 6 |
embryonic cell | 4.59e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.