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FFCP PHASE1:Mm9::chr4:124334894..124334899,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18991|HGNC=|UniProt=F2Z3U7|association_with_transcript=0bp_to_ENSMUST00000105033_5end|description=CAGE_peak_1_at_Pou3f1_5end|id=chr4:124334894..124334899,+|ontology_enrichment_celltype=CL:0000117!2.28e-13!23;CL:0000337!2.28e-13!23;CL:0000221!7.79e-11!44;CL:0000133!7.79e-11!44;CL:0000540!2.43e-10!33;CL:0000047!2.43e-10!33;CL:0000031!2.43e-10!33;CL:0000404!2.43e-10!33;CL:0002319!2.77e-10!43;CL:0000393!1.84e-07!39;CL:0000211!1.84e-07!39;CL:0000055!2.47e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.99e-17,23;CL:0000337,7.99e-17,23;CL:0000540,3.03e-12,33;CL:0000047,3.03e-12,33;CL:0000031,3.03e-12,33;CL:0000404,3.03e-12,33;CL:0000221,1.99e-10,44;CL:0000133,1.99e-10,44;CL:0002319,8.68e-10,43;CL:0000393,7.50e-09,39;CL:0000211,7.50e-09,39;CL:0002609,6.17e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.29e-23!102;UBERON:0000924!3.29e-23!102;UBERON:0006601!3.29e-23!102;UBERON:0000073!9.91e-21!75;UBERON:0001016!9.91e-21!75;UBERON:0000033!4.24e-20!63;UBERON:0001017!1.81e-19!73;UBERON:0005743!1.81e-19!73;UBERON:0001049!7.31e-19!52;UBERON:0005068!7.31e-19!52;UBERON:0006241!7.31e-19!52;UBERON:0007135!7.31e-19!52;UBERON:0002020!7.15e-18!34;UBERON:0003056!1.43e-17!49;UBERON:0000955!1.72e-17!50;UBERON:0006238!1.72e-17!50;UBERON:0002616!4.29e-17!49;UBERON:0002346!5.66e-17!71;UBERON:0003075!5.66e-17!71;UBERON:0007284!5.66e-17!71;UBERON:0002791!2.81e-15!29;UBERON:0003528!2.81e-15!29;UBERON:0001893!2.81e-15!29;UBERON:0003080!4.26e-15!40;UBERON:0002780!1.30e-14!39;UBERON:0001890!1.30e-14!39;UBERON:0006240!1.30e-14!39;UBERON:0000956!1.84e-11!21;UBERON:0001869!1.84e-11!21;UBERON:0000203!1.84e-11!21;UBERON:0000153!1.67e-10!94;UBERON:0007811!2.62e-10!86;UBERON:0002619!6.31e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.01e-27,95;UBERON:0000924,9.01e-27,95;UBERON:0006601,9.01e-27,95;UBERON:0010371,1.75e-24,73;UBERON:0000073,1.12e-21,54;UBERON:0001016,2.41e-21,75;UBERON:0002020,2.59e-21,34;UBERON:0002346,9.27e-21,64;UBERON:0003075,9.27e-21,64;UBERON:0007284,9.27e-21,64;UBERON:0001049,1.50e-20,52;UBERON:0005068,1.50e-20,52;UBERON:0006241,1.50e-20,52;UBERON:0007135,1.50e-20,52;UBERON:0001017,7.71e-20,73;UBERON:0003056,1.91e-18,49;UBERON:0003528,5.62e-18,29;UBERON:0002791,5.62e-18,29;UBERON:0001893,5.62e-18,29;UBERON:0000955,2.85e-17,47;UBERON:0006238,2.85e-17,47;UBERON:0002616,8.76e-17,46;UBERON:0003080,1.91e-16,40;UBERON:0002780,7.72e-16,39;UBERON:0001890,7.72e-16,39;UBERON:0006240,7.72e-16,39;UBERON:0000956,4.59e-13,21;UBERON:0001869,4.59e-13,21;UBERON:0000203,4.59e-13,21;UBERON:0010314,2.75e-10,92;UBERON:0002619,7.45e-10,17;UBERON:0002021,1.20e-07,10;UBERON:0000411,1.20e-07,10;UBERON:0001950,1.20e-07,10|phase1_expression=1.92178616525753,0.697950815278722,1.36499771816861,1.51232105653415,1.50268718983904,1.00727563147134,0.467225281191051,0,0.985521055061667,1.63845168425395,0.171217968225505,0,0,0.174840804837995,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,1.34437519656986,0.257259436035947,0,0.515672092277442,27.3127222160457,9.52183762689659,21.5502677192101,0.338844532069132,0,0.899899717281399,0,0.7104801149461,0.898800331555214,0.768436610643109,34.3212616741061,26.5961698513431,33.4416688548697,9.14083150092171,11.2642955885323,26.8254850280749,30.9580871388903,28.4957823849107,3.30347642998166,6.89511625660014,7.52672012955593,9.36392642884376,8.69132614222892,8.85552729946492,4.74611098302348,2.25105044012672,5.04234217663473,7.36571463684169,7.68807076315156,6.33758115806022,16.053952986635,15.7944560623182,1.15945795480671,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,17.182897212755,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0,1.97755974187499,0.144599356919912,0,1.13236794963186,0.220841518460394,0,0,1.17112318804619,1.25668024088073,0,0,0,0,7.48953197024113,21.0450277296568,19.476424577494,7.47444576826789,8.18289463457058,6.02585329222724,8.11206315338788,0.509196819251581,1.8661045591514,5.81262344397452,0.631325567659422,0.390361328888111,9.42598628177239,10.0834792690996,9.49440352365005,5.23881043465224,3.71529788826064,2.90475346135159,1.03481348295606,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,0.556094498451196,4.87553033131033,3.90986059175093,0.398068533636986,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.583826711835847,0,0,0,0.146199987425332,0,0,23.9730541363105,18.0083071663748,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0.49095073923223,0.0632365371242573,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0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|EntrezGene=18991
|HGNC=
|UniProt=F2Z3U7
|association_with_transcript=0bp_to_ENSMUST00000105033_5end
|description=CAGE_peak_1_at_Pou3f1_5end
|id=chr4:124334894..124334899,+
|ontology_enrichment_celltype=CL:0000117!2.28e-13!23;CL:0000337!2.28e-13!23;CL:0000221!7.79e-11!44;CL:0000133!7.79e-11!44;CL:0000540!2.43e-10!33;CL:0000047!2.43e-10!33;CL:0000031!2.43e-10!33;CL:0000404!2.43e-10!33;CL:0002319!2.77e-10!43;CL:0000393!1.84e-07!39;CL:0000211!1.84e-07!39;CL:0000055!2.47e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.99e-17,23;CL:0000337,7.99e-17,23;CL:0000540,3.03e-12,33;CL:0000047,3.03e-12,33;CL:0000031,3.03e-12,33;CL:0000404,3.03e-12,33;CL:0000221,1.99e-10,44;CL:0000133,1.99e-10,44;CL:0002319,8.68e-10,43;CL:0000393,7.50e-09,39;CL:0000211,7.50e-09,39;CL:0002609,6.17e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.29e-23!102;UBERON:0000924!3.29e-23!102;UBERON:0006601!3.29e-23!102;UBERON:0000073!9.91e-21!75;UBERON:0001016!9.91e-21!75;UBERON:0000033!4.24e-20!63;UBERON:0001017!1.81e-19!73;UBERON:0005743!1.81e-19!73;UBERON:0001049!7.31e-19!52;UBERON:0005068!7.31e-19!52;UBERON:0006241!7.31e-19!52;UBERON:0007135!7.31e-19!52;UBERON:0002020!7.15e-18!34;UBERON:0003056!1.43e-17!49;UBERON:0000955!1.72e-17!50;UBERON:0006238!1.72e-17!50;UBERON:0002616!4.29e-17!49;UBERON:0002346!5.66e-17!71;UBERON:0003075!5.66e-17!71;UBERON:0007284!5.66e-17!71;UBERON:0002791!2.81e-15!29;UBERON:0003528!2.81e-15!29;UBERON:0001893!2.81e-15!29;UBERON:0003080!4.26e-15!40;UBERON:0002780!1.30e-14!39;UBERON:0001890!1.30e-14!39;UBERON:0006240!1.30e-14!39;UBERON:0000956!1.84e-11!21;UBERON:0001869!1.84e-11!21;UBERON:0000203!1.84e-11!21;UBERON:0000153!1.67e-10!94;UBERON:0007811!2.62e-10!86;UBERON:0002619!6.31e-09!17
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.01e-27,95;UBERON:0000924,9.01e-27,95;UBERON:0006601,9.01e-27,95;UBERON:0010371,1.75e-24,73;UBERON:0000073,1.12e-21,54;UBERON:0001016,2.41e-21,75;UBERON:0002020,2.59e-21,34;UBERON:0002346,9.27e-21,64;UBERON:0003075,9.27e-21,64;UBERON:0007284,9.27e-21,64;UBERON:0001049,1.50e-20,52;UBERON:0005068,1.50e-20,52;UBERON:0006241,1.50e-20,52;UBERON:0007135,1.50e-20,52;UBERON:0001017,7.71e-20,73;UBERON:0003056,1.91e-18,49;UBERON:0003528,5.62e-18,29;UBERON:0002791,5.62e-18,29;UBERON:0001893,5.62e-18,29;UBERON:0000955,2.85e-17,47;UBERON:0006238,2.85e-17,47;UBERON:0002616,8.76e-17,46;UBERON:0003080,1.91e-16,40;UBERON:0002780,7.72e-16,39;UBERON:0001890,7.72e-16,39;UBERON:0006240,7.72e-16,39;UBERON:0000956,4.59e-13,21;UBERON:0001869,4.59e-13,21;UBERON:0000203,4.59e-13,21;UBERON:0010314,2.75e-10,92;UBERON:0002619,7.45e-10,17;UBERON:0002021,1.20e-07,10;UBERON:0000411,1.20e-07,10;UBERON:0001950,1.20e-07,10
|phase1_expression=1.92178616525753,0.697950815278722,1.36499771816861,1.51232105653415,1.50268718983904,1.00727563147134,0.467225281191051,0,0.985521055061667,1.63845168425395,0.171217968225505,0,0,0.174840804837995,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,1.34437519656986,0.257259436035947,0,0.515672092277442,27.3127222160457,9.52183762689659,21.5502677192101,0.338844532069132,0,0.899899717281399,0,0.7104801149461,0.898800331555214,0.768436610643109,34.3212616741061,26.5961698513431,33.4416688548697,9.14083150092171,11.2642955885323,26.8254850280749,30.9580871388903,28.4957823849107,3.30347642998166,6.89511625660014,7.52672012955593,9.36392642884376,8.69132614222892,8.85552729946492,4.74611098302348,2.25105044012672,5.04234217663473,7.36571463684169,7.68807076315156,6.33758115806022,16.053952986635,15.7944560623182,1.15945795480671,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,17.182897212755,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0,1.97755974187499,0.144599356919912,0,1.13236794963186,0.220841518460394,0,0,1.17112318804619,1.25668024088073,0,0,0,0,7.48953197024113,21.0450277296568,19.476424577494,7.47444576826789,8.18289463457058,6.02585329222724,8.11206315338788,0.509196819251581,1.8661045591514,5.81262344397452,0.631325567659422,0.390361328888111,9.42598628177239,10.0834792690996,9.49440352365005,5.23881043465224,3.71529788826064,2.90475346135159,1.03481348295606,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,0.556094498451196,4.87553033131033,3.90986059175093,0.398068533636986,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.583826711835847,0,0,0,0.146199987425332,0,0,23.9730541363105,18.0083071663748,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0.49095073923223,0.0632365371242573,0,0,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.947457058852424,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0.44292937929755,0.478364305972461,0.163863314715738,0.172684981865896,0,7.53956419696361,2.17562273527484,0,0,1.9266070798535,4.45404409050372,0,1.51482556322624,0,0,0.646270193198397,1.67278158566786,2.89638276307112,2.83076530788832,0,0.292255857911312,0.395287777946524,4.17717711348349,0,0,0.162886959353576,0,0,0.728341908464944,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,3.42116078659489,3.36332577835162,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,2.74018454203139,0.469343416127421,5.08396970073168,0,18.6321465823872,13.5630118424561,17.3098094543807,15.9958940964203,11.3257220824092,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0,0,0,0,0.247960367176008,0.523511883968059,0.129614973291793,0,0,0.448549638131936,0,0.194451188344048,0,0,0.234714477291508,1.43224823328345,1.15345278868282,0.966336483304024,0.576060012515731,0,0.202725215290164,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.680191150845634,55.052516436768,61.095136351053,38.2776925310099,0.19318959403219,0,0,0.428736758158132,0.501572104035363,8.471277639256,14.7304075682297,17.7597609166213,16.6697586873377,8.22099023724771,3.7769694869485,6.75022500231806,9.45674526770863,7.70342095273148,4.14208249401456,3.84013186061454,4.38927360741134,2.21953687480374,1.45864030240976,3.14419743941973,3.67687016900028,3.11145418922261,2.47242068686673,2.56735367673452,3.03236654116557,2.5347929989024,3.2066478035633,2.99652823903624,3.71345883948242,3.9056118889817,5.23923060411381,4.05595140806994,5.01563973205633,3.70877310722976,2.50238164228475,1.37147700954166,3.01708870470874,3.33810665926249,2.18019624948493,2.91739079287525,2.62305284464197,2.92684756596436,2.36762740294059,4.07412341537585,1.12228454331548,3.2031454893527,4.13718825977367,2.45538625901814,3.25367366490529,3.85813221962283,10.4920442733937,3.74290573512653,6.23126056740065,4.01705497344571,7.0589254118245,2.08681052058379
|short_description=p1@Pou3f1
}}

Revision as of 03:43, 14 September 2013

Short description:p1@Pou3f1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pou3f1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000105033_5end
EntrezGene:Pou3f1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pou3f1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C327.31
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.60
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D933.44
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.83
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D628.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.69
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D916.05
Mouse Schwann, donor2.CNhs12573.11746-123F915.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F119.48
cortex, adult.CNhs10473.12-14D57.47
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E29.43
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D49.49
eyeball, neonate N00.CNhs11207.633-15C65.24
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E823.97
hippocampus, neonate N00.CNhs11228.627-43G118.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C318.63
skin, neonate N00.CNhs11124.650-25G413.56
skin, neonate N03.CNhs11215.662-22H317.31
skin, neonate N06.CNhs11097.693-20I516.00
skin, neonate N10.CNhs11108.762-6C411.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H355.05
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F761.10
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G538.28
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B42.09





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure9.01e-2795
ectoderm9.01e-2795
presumptive ectoderm9.01e-2795
ecto-epithelium1.75e-2473
regional part of nervous system1.12e-2154
nervous system2.41e-2175
gray matter2.59e-2134
neurectoderm9.27e-2164
neural plate9.27e-2164
presumptive neural plate9.27e-2164
neural tube1.50e-2052
neural rod1.50e-2052
future spinal cord1.50e-2052
neural keel1.50e-2052
central nervous system7.71e-2073
pre-chordal neural plate1.91e-1849
brain grey matter5.62e-1829
regional part of telencephalon5.62e-1829
telencephalon5.62e-1829
brain2.85e-1747
future brain2.85e-1747
regional part of brain8.76e-1746
anterior neural tube1.91e-1640
regional part of forebrain7.72e-1639
forebrain7.72e-1639
future forebrain7.72e-1639
cerebral cortex4.59e-1321
cerebral hemisphere4.59e-1321
pallium4.59e-1321
structure with developmental contribution from neural crest2.75e-1092
regional part of cerebral cortex7.45e-1017
occipital lobe1.20e-0710
visual cortex1.20e-0710
neocortex1.20e-0710







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