FFCP PHASE1:Hg19::chr8:4852171..4852180,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64478|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14026|TSSclassifier=S|UniProt=F8W9C3|association_with_transcript=42bp_to_ENST00000400186_5end|coexpression_cluster_id=C376|description=CAGE_peak_14_at_CSMD1_5end|id=chr8:4852171..4852180,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.42e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.06e-70!57;UBERON:0005068!2.06e-70!57;UBERON:0006241!2.06e-70!57;UBERON:0007135!2.06e-70!57;UBERON:0001893!1.30e-67!34;UBERON:0002020!1.92e-67!34;UBERON:0003528!1.92e-67!34;UBERON:0002791!1.10e-63!33;UBERON:0002616!1.45e-63!59;UBERON:0001869!1.14e-60!32;UBERON:0000955!1.88e-60!69;UBERON:0006238!1.88e-60!69;UBERON:0002780!3.00e-60!41;UBERON:0001890!3.00e-60!41;UBERON:0006240!3.00e-60!41;UBERON:0001017!4.36e-60!82;UBERON:0003080!1.05e-58!42;UBERON:0001950!2.75e-58!20;UBERON:0005743!5.42e-57!86;UBERON:0000073!5.38e-54!94;UBERON:0001016!5.38e-54!94;UBERON:0002619!7.45e-53!22;UBERON:0002346!4.44e-48!90;UBERON:0003075!1.80e-47!86;UBERON:0007284!1.80e-47!86;UBERON:0000956!2.85e-46!25;UBERON:0000203!2.85e-46!25;UBERON:0007023!1.11e-43!115;UBERON:0003056!7.85e-39!61;UBERON:0000033!3.23e-33!123;UBERON:0000153!2.43e-31!129;UBERON:0007811!2.43e-31!129;UBERON:0000924!7.91e-28!173;UBERON:0006601!7.91e-28!173;UBERON:0004121!6.79e-27!169;UBERON:0002021!6.82e-23!5;UBERON:0002308!1.98e-22!9;UBERON:0000125!1.98e-22!9;UBERON:0001871!2.43e-19!7;UBERON:0000200!1.02e-18!6;UBERON:0000025!5.66e-17!194;UBERON:0002420!1.20e-16!9;UBERON:0007245!1.20e-16!9;UBERON:0010009!1.20e-16!9;UBERON:0010011!1.20e-16!9;UBERON:0000454!1.20e-16!9;UBERON:0009663!3.73e-15!7;UBERON:0001872!7.19e-15!5;UBERON:0002771!5.13e-14!3;UBERON:0004111!3.23e-13!241;UBERON:0000988!3.30e-13!3;UBERON:0006331!3.74e-13!3;UBERON:0003076!6.28e-13!15;UBERON:0003057!6.28e-13!15;UBERON:0002298!8.18e-13!8;UBERON:0004733!2.84e-12!12;UBERON:0002028!2.84e-12!12;UBERON:0007277!2.84e-12!12;UBERON:0002680!9.66e-12!9;UBERON:0001895!9.66e-12!9;UBERON:0010092!9.66e-12!9;UBERON:0004732!2.78e-11!13;UBERON:0000064!4.08e-11!219;UBERON:0000477!7.89e-11!286;UBERON:0000369!1.38e-10!4;UBERON:0002435!1.38e-10!4;UBERON:0000204!1.38e-10!4;UBERON:0010082!1.38e-10!4;UBERON:0002148!1.55e-09!2;UBERON:0009662!1.55e-09!2;UBERON:0000483!1.94e-09!309;UBERON:0000119!2.83e-09!312;UBERON:0000475!3.06e-08!365;UBERON:0005383!9.55e-07!3;UBERON:0005382!9.55e-07!3|ontology_enrichment_uberon_v019=UBERON:0001950;5.85e-80;20!UBERON:0002619;6.12e-73;22!UBERON:0000956;1.97e-64;25!UBERON:0000203;1.97e-64;25!UBERON:0001869;2.25e-64;32!UBERON:0001893;2.80e-58;34!UBERON:0002791;5.47e-56;32!UBERON:0003528;3.49e-49;34!UBERON:0002020;3.49e-49;34!UBERON:0002021;3.14e-45;5!UBERON:0002780;1.65e-38;41!UBERON:0001890;1.65e-38;41!UBERON:0001872;3.17e-26;5!UBERON:0000073;3.81e-22;53!UBERON:0002616;3.81e-22;53!UBERON:0000200;8.89e-22;6!UBERON:0000955;4.90e-18;68!UBERON:0002022;6.92e-16;1!UBERON:0002581;1.78e-15;1!UBERON:0002902;1.78e-15;1!UBERON:0001882;1.78e-15;1!UBERON:0009899;1.78e-15;1!UBERON:0007190;1.78e-15;1!UBERON:0005403;1.78e-15;1!UBERON:0001017;1.35e-14;75!UBERON:0001016;4.16e-13;83!UBERON:0001871;4.95e-09;6!UBERON:0002771;2.15e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001950,6.36e-80,20;UBERON:0002619,6.60e-73,22;UBERON:0001869,8.57e-71,32;UBERON:0001893,1.07e-66,34;UBERON:0000956,2.11e-64,25;UBERON:0000203,2.11e-64,25;UBERON:0002791,3.47e-60,32;UBERON:0003528,1.08e-56,34;UBERON:0002020,1.08e-56,34;UBERON:0002780,2.02e-55,41;UBERON:0001890,2.02e-55,41;UBERON:0003080,2.02e-55,41;UBERON:0006240,2.02e-55,41;UBERON:0002021,2.24e-45,5;UBERON:0000073,7.00e-43,53;UBERON:0002616,7.00e-43,53;UBERON:0001049,1.43e-40,56;UBERON:0005068,1.43e-40,56;UBERON:0006241,1.43e-40,56;UBERON:0007135,1.43e-40,56;UBERON:0000955,2.51e-38,68;UBERON:0006238,2.51e-38,68;UBERON:0003056,3.26e-37,61;UBERON:0001017,3.76e-32,81;UBERON:0001016,6.79e-29,89;UBERON:0003075,1.62e-27,82;UBERON:0007284,1.62e-27,82;UBERON:0002346,3.36e-26,86;UBERON:0001872,7.18e-26,5;UBERON:0000200,7.19e-22,6;UBERON:0010371,1.66e-21,104;UBERON:0010314,1.02e-16,132;UBERON:0007023,1.22e-16,114;UBERON:0002022,6.44e-16,1;UBERON:0007190,1.16e-15,1;UBERON:0002902,1.78e-15,1;UBERON:0009899,1.78e-15,1;UBERON:0001882,2.38e-15,1;UBERON:0005403,2.38e-15,1;UBERON:0002581,3.17e-15,1;UBERON:0004121,1.09e-14,171;UBERON:0000924,1.09e-14,171;UBERON:0006601,1.09e-14,171;UBERON:0000025,4.17e-11,192;UBERON:0011216,6.13e-11,223;UBERON:0001871,4.39e-09,6;UBERON:0004111,1.31e-08,240;UBERON:0002771,1.61e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64478 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |||
|TSSclassifier=S | |||
|UniProt=F8W9C3 | |||
|association_with_transcript=42bp_to_ENST00000400186_5end | |||
|coexpression_cluster_id=C376 | |||
|description=CAGE_peak_14_at_CSMD1_5end | |||
|id=chr8:4852171..4852180,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.06e-70!57;UBERON:0005068!2.06e-70!57;UBERON:0006241!2.06e-70!57;UBERON:0007135!2.06e-70!57;UBERON:0001893!1.30e-67!34;UBERON:0002020!1.92e-67!34;UBERON:0003528!1.92e-67!34;UBERON:0002791!1.10e-63!33;UBERON:0002616!1.45e-63!59;UBERON:0001869!1.14e-60!32;UBERON:0000955!1.88e-60!69;UBERON:0006238!1.88e-60!69;UBERON:0002780!3.00e-60!41;UBERON:0001890!3.00e-60!41;UBERON:0006240!3.00e-60!41;UBERON:0001017!4.36e-60!82;UBERON:0003080!1.05e-58!42;UBERON:0001950!2.75e-58!20;UBERON:0005743!5.42e-57!86;UBERON:0000073!5.38e-54!94;UBERON:0001016!5.38e-54!94;UBERON:0002619!7.45e-53!22;UBERON:0002346!4.44e-48!90;UBERON:0003075!1.80e-47!86;UBERON:0007284!1.80e-47!86;UBERON:0000956!2.85e-46!25;UBERON:0000203!2.85e-46!25;UBERON:0007023!1.11e-43!115;UBERON:0003056!7.85e-39!61;UBERON:0000033!3.23e-33!123;UBERON:0000153!2.43e-31!129;UBERON:0007811!2.43e-31!129;UBERON:0000924!7.91e-28!173;UBERON:0006601!7.91e-28!173;UBERON:0004121!6.79e-27!169;UBERON:0002021!6.82e-23!5;UBERON:0002308!1.98e-22!9;UBERON:0000125!1.98e-22!9;UBERON:0001871!2.43e-19!7;UBERON:0000200!1.02e-18!6;UBERON:0000025!5.66e-17!194;UBERON:0002420!1.20e-16!9;UBERON:0007245!1.20e-16!9;UBERON:0010009!1.20e-16!9;UBERON:0010011!1.20e-16!9;UBERON:0000454!1.20e-16!9;UBERON:0009663!3.73e-15!7;UBERON:0001872!7.19e-15!5;UBERON:0002771!5.13e-14!3;UBERON:0004111!3.23e-13!241;UBERON:0000988!3.30e-13!3;UBERON:0006331!3.74e-13!3;UBERON:0003076!6.28e-13!15;UBERON:0003057!6.28e-13!15;UBERON:0002298!8.18e-13!8;UBERON:0004733!2.84e-12!12;UBERON:0002028!2.84e-12!12;UBERON:0007277!2.84e-12!12;UBERON:0002680!9.66e-12!9;UBERON:0001895!9.66e-12!9;UBERON:0010092!9.66e-12!9;UBERON:0004732!2.78e-11!13;UBERON:0000064!4.08e-11!219;UBERON:0000477!7.89e-11!286;UBERON:0000369!1.38e-10!4;UBERON:0002435!1.38e-10!4;UBERON:0000204!1.38e-10!4;UBERON:0010082!1.38e-10!4;UBERON:0002148!1.55e-09!2;UBERON:0009662!1.55e-09!2;UBERON:0000483!1.94e-09!309;UBERON:0000119!2.83e-09!312;UBERON:0000475!3.06e-08!365;UBERON:0005383!9.55e-07!3;UBERON:0005382!9.55e-07!3 | |||
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|short_description=p14@CSMD1 | |||
}} |
Revision as of 05:25, 14 September 2013
Short description: | p14@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_CSMD1_5end |
Coexpression cluster: | C376_brain_temporal_insula_frontal_occipital_postcentral_paracentral |
Association with transcript: | 42bp_to_ENST00000400186_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | F8W9C3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.