FFCP PHASE1:Mm9::chr5:103640270..103640340,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26414|HGNC=|MCL_coexpression_id=1|UniProt=Q78GB8,Q3TQZ7|association_with_transcript=0bp_to_ENSMUST00000060871,ENSMUST00000112846,ENSMUST00000152609_5end|description=CAGE_peak_1_at_Mapk10_5end|id=chr5:103640270..103640340,-|ontology_enrichment_celltype=CL:0000540!6.33e-15!33;CL:0000047!6.33e-15!33;CL:0000031!6.33e-15!33;CL:0000404!6.33e-15!33;CL:0002319!6.69e-14!43;CL:0000221!7.65e-14!44;CL:0000133!7.65e-14!44;CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000393!6.86e-10!39;CL:0000211!6.86e-10!39;CL:0000055!4.18e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.04e-15,33;CL:0000047,1.04e-15,33;CL:0000031,1.04e-15,33;CL:0000404,1.04e-15,33;CL:0002319,8.98e-15,43;CL:0000221,1.04e-14,44;CL:0000133,1.04e-14,44;CL:0000117,3.95e-13,23;CL:0000337,3.95e-13,23;CL:0000393,4.99e-11,39;CL:0000211,4.99e-11,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.18e-33!73;UBERON:0005743!1.18e-33!73;UBERON:0000073!4.04e-33!75;UBERON:0001016!4.04e-33!75;UBERON:0002346!4.36e-30!71;UBERON:0003075!4.36e-30!71;UBERON:0007284!4.36e-30!71;UBERON:0004121!2.43e-28!102;UBERON:0000924!2.43e-28!102;UBERON:0006601!2.43e-28!102;UBERON:0001049!8.42e-26!52;UBERON:0005068!8.42e-26!52;UBERON:0006241!8.42e-26!52;UBERON:0007135!8.42e-26!52;UBERON:0000033!1.63e-25!63;UBERON:0000955!5.21e-25!50;UBERON:0006238!5.21e-25!50;UBERON:0002616!2.24e-24!49;UBERON:0003056!1.14e-22!49;UBERON:0003080!5.06e-21!40;UBERON:0002780!2.57e-20!39;UBERON:0001890!2.57e-20!39;UBERON:0006240!2.57e-20!39;UBERON:0002020!1.74e-19!34;UBERON:0002791!5.32e-17!29;UBERON:0003528!5.32e-17!29;UBERON:0001893!5.32e-17!29;UBERON:0007811!2.75e-13!86;UBERON:0000956!1.34e-12!21;UBERON:0001869!1.34e-12!21;UBERON:0000203!1.34e-12!21;UBERON:0000153!3.34e-11!94;UBERON:0002619!9.16e-11!17;UBERON:0000468!1.99e-08!333;UBERON:0002021!3.91e-08!10;UBERON:0000411!3.91e-08!10;UBERON:0001950!3.91e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.76e-36,73;UBERON:0001016,3.62e-35,75;UBERON:0002346,4.78e-31,64;UBERON:0003075,4.78e-31,64;UBERON:0007284,4.78e-31,64;UBERON:0010314,1.26e-29,92;UBERON:0000073,8.11e-29,54;UBERON:0004121,9.10e-29,95;UBERON:0000924,9.10e-29,95;UBERON:0006601,9.10e-29,95;UBERON:0001049,2.03e-27,52;UBERON:0005068,2.03e-27,52;UBERON:0006241,2.03e-27,52;UBERON:0007135,2.03e-27,52;UBERON:0000955,1.78e-24,47;UBERON:0006238,1.78e-24,47;UBERON:0010371,2.89e-24,73;UBERON:0003056,6.58e-24,49;UBERON:0002616,8.13e-24,46;UBERON:0003080,3.64e-22,40;UBERON:0002780,2.03e-21,39;UBERON:0001890,2.03e-21,39;UBERON:0006240,2.03e-21,39;UBERON:0002020,1.55e-20,34;UBERON:0003528,6.61e-18,29;UBERON:0002791,6.61e-18,29;UBERON:0001893,6.61e-18,29;UBERON:0000956,3.01e-13,21;UBERON:0001869,3.01e-13,21;UBERON:0000203,3.01e-13,21;UBERON:0002619,2.65e-11,17;UBERON:0002021,1.61e-08,10;UBERON:0000411,1.61e-08,10;UBERON:0001950,1.61e-08,10|phase1_expression=6.24580503708696,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,75.7735715246032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9913836009246,18.0142669842267,22.3594383935426,6.99932108126813,14.3752564364972,0,0,0,0,0,1.54701627683233,103.990660881833,114.262051522759,90.0040592978774,0.338844532069132,0.889294796111139,0,0,0,9.88680364710736,13.0634223809329,43.5496371695606,41.7168349444924,45.8508415746013,71.4127461009509,76.1996466283067,95.6653141868791,77.6348315247715,97.4371913806622,263.176955588539,242.989004376112,268.65782666517,106.564120485997,94.1407852668795,119.810075228055,210.783164246043,171.079833449631,189.317028995468,117.851434189467,122.439645487229,88.9125356586684,1.81742863999642,3.55186332501892,0.579728977403356,0,0,1.07940638327563,0,0,19.1004411379183,0,0,0,6.19711047017394,0,0,0,0,0,0,11.6467557313441,0.517875767294343,11.2816025689267,11.7970022200972,20.3991870469135,11.5307748628029,21.7040602395776,23.6353301342767,4.14699751387929,0,1.3013942122792,0,0.647067399789637,0,0,1.86391761218122,303.906467297986,211.750620588403,0.766371165625774,0,0,0,352.457374519548,298.747893640563,148.774752901631,521.125311936445,380.504600507532,320.616952755401,262.6686049067,1.12023300235348,0.497627882440372,0.758168275301024,26.7261156975822,6.50602214813519,11.2652031172402,18.0062129805349,19.591626318643,20.547022743701,24.725948014976,23.2380276908127,63.3823258310588,0.862271971731369,0.189106080167819,0.351902248327898,0.657587197282725,1.66828349535359,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,1.03562886267751,1.17263029990548,1.44049649168812,3.31442629819294,1.57411385397923,3.5481435964097,4.41814495025775,7.51165523918934,15.7633212195679,18.1015834904828,29.8784784623953,27.2391200074075,29.3861974724918,30.7370161407471,22.6808847705028,443.080921624616,106.917892262077,0.330418782983798,1.32225283331772,3.62590025909898,9.75394021813842,12.6290112095651,11.4959609035305,9.56225588532942,9.3210556795154,1.42358718463353,6.75265714368445,5.52937459360593,7.56034593756373,5.458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| ||
|EntrezGene=26414 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q78GB8,Q3TQZ7 | |||
|association_with_transcript=0bp_to_ENSMUST00000060871,ENSMUST00000112846,ENSMUST00000152609_5end | |||
|description=CAGE_peak_1_at_Mapk10_5end | |||
|id=chr5:103640270..103640340,- | |||
|ontology_enrichment_celltype=CL:0000540!6.33e-15!33;CL:0000047!6.33e-15!33;CL:0000031!6.33e-15!33;CL:0000404!6.33e-15!33;CL:0002319!6.69e-14!43;CL:0000221!7.65e-14!44;CL:0000133!7.65e-14!44;CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000393!6.86e-10!39;CL:0000211!6.86e-10!39;CL:0000055!4.18e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.04e-15,33;CL:0000047,1.04e-15,33;CL:0000031,1.04e-15,33;CL:0000404,1.04e-15,33;CL:0002319,8.98e-15,43;CL:0000221,1.04e-14,44;CL:0000133,1.04e-14,44;CL:0000117,3.95e-13,23;CL:0000337,3.95e-13,23;CL:0000393,4.99e-11,39;CL:0000211,4.99e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.18e-33!73;UBERON:0005743!1.18e-33!73;UBERON:0000073!4.04e-33!75;UBERON:0001016!4.04e-33!75;UBERON:0002346!4.36e-30!71;UBERON:0003075!4.36e-30!71;UBERON:0007284!4.36e-30!71;UBERON:0004121!2.43e-28!102;UBERON:0000924!2.43e-28!102;UBERON:0006601!2.43e-28!102;UBERON:0001049!8.42e-26!52;UBERON:0005068!8.42e-26!52;UBERON:0006241!8.42e-26!52;UBERON:0007135!8.42e-26!52;UBERON:0000033!1.63e-25!63;UBERON:0000955!5.21e-25!50;UBERON:0006238!5.21e-25!50;UBERON:0002616!2.24e-24!49;UBERON:0003056!1.14e-22!49;UBERON:0003080!5.06e-21!40;UBERON:0002780!2.57e-20!39;UBERON:0001890!2.57e-20!39;UBERON:0006240!2.57e-20!39;UBERON:0002020!1.74e-19!34;UBERON:0002791!5.32e-17!29;UBERON:0003528!5.32e-17!29;UBERON:0001893!5.32e-17!29;UBERON:0007811!2.75e-13!86;UBERON:0000956!1.34e-12!21;UBERON:0001869!1.34e-12!21;UBERON:0000203!1.34e-12!21;UBERON:0000153!3.34e-11!94;UBERON:0002619!9.16e-11!17;UBERON:0000468!1.99e-08!333;UBERON:0002021!3.91e-08!10;UBERON:0000411!3.91e-08!10;UBERON:0001950!3.91e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.76e-36,73;UBERON:0001016,3.62e-35,75;UBERON:0002346,4.78e-31,64;UBERON:0003075,4.78e-31,64;UBERON:0007284,4.78e-31,64;UBERON:0010314,1.26e-29,92;UBERON:0000073,8.11e-29,54;UBERON:0004121,9.10e-29,95;UBERON:0000924,9.10e-29,95;UBERON:0006601,9.10e-29,95;UBERON:0001049,2.03e-27,52;UBERON:0005068,2.03e-27,52;UBERON:0006241,2.03e-27,52;UBERON:0007135,2.03e-27,52;UBERON:0000955,1.78e-24,47;UBERON:0006238,1.78e-24,47;UBERON:0010371,2.89e-24,73;UBERON:0003056,6.58e-24,49;UBERON:0002616,8.13e-24,46;UBERON:0003080,3.64e-22,40;UBERON:0002780,2.03e-21,39;UBERON:0001890,2.03e-21,39;UBERON:0006240,2.03e-21,39;UBERON:0002020,1.55e-20,34;UBERON:0003528,6.61e-18,29;UBERON:0002791,6.61e-18,29;UBERON:0001893,6.61e-18,29;UBERON:0000956,3.01e-13,21;UBERON:0001869,3.01e-13,21;UBERON:0000203,3.01e-13,21;UBERON:0002619,2.65e-11,17;UBERON:0002021,1.61e-08,10;UBERON:0000411,1.61e-08,10;UBERON:0001950,1.61e-08,10 | |||
|phase1_expression=6.24580503708696,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,75.7735715246032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9913836009246,18.0142669842267,22.3594383935426,6.99932108126813,14.3752564364972,0,0,0,0,0,1.54701627683233,103.990660881833,114.262051522759,90.0040592978774,0.338844532069132,0.889294796111139,0,0,0,9.88680364710736,13.0634223809329,43.5496371695606,41.7168349444924,45.8508415746013,71.4127461009509,76.1996466283067,95.6653141868791,77.6348315247715,97.4371913806622,263.176955588539,242.989004376112,268.65782666517,106.564120485997,94.1407852668795,119.810075228055,210.783164246043,171.079833449631,189.317028995468,117.851434189467,122.439645487229,88.9125356586684,1.81742863999642,3.55186332501892,0.579728977403356,0,0,1.07940638327563,0,0,19.1004411379183,0,0,0,6.19711047017394,0,0,0,0,0,0,11.6467557313441,0.517875767294343,11.2816025689267,11.7970022200972,20.3991870469135,11.5307748628029,21.7040602395776,23.6353301342767,4.14699751387929,0,1.3013942122792,0,0.647067399789637,0,0,1.86391761218122,303.906467297986,211.750620588403,0.766371165625774,0,0,0,352.457374519548,298.747893640563,148.774752901631,521.125311936445,380.504600507532,320.616952755401,262.6686049067,1.12023300235348,0.497627882440372,0.758168275301024,26.7261156975822,6.50602214813519,11.2652031172402,18.0062129805349,19.591626318643,20.547022743701,24.725948014976,23.2380276908127,63.3823258310588,0.862271971731369,0.189106080167819,0.351902248327898,0.657587197282725,1.66828349535359,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,1.03562886267751,1.17263029990548,1.44049649168812,3.31442629819294,1.57411385397923,3.5481435964097,4.41814495025775,7.51165523918934,15.7633212195679,18.1015834904828,29.8784784623953,27.2391200074075,29.3861974724918,30.7370161407471,22.6808847705028,443.080921624616,106.917892262077,0.330418782983798,1.32225283331772,3.62590025909898,9.75394021813842,12.6290112095651,11.4959609035305,9.56225588532942,9.3210556795154,1.42358718463353,6.75265714368445,5.52937459360593,7.56034593756373,5.45899443933536,1.79763881730844,1.94524244887225,3.18626037206988,0.948339504765408,4.22719496655997,0,0.203651327845314,0.581857461502877,1.61312385747733,1.58091342810643,2.65698266363284,3.1399745568275,4.44229790118482,0,0.500535317148282,1.17935397067922,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,2.65287976478679,1.79261474086228,0.848725428875941,0.469380496577004,1.67506257441816,0.714130922658041,0.585400943573396,0.472905432318573,1.10732344824387,0.318909537314974,0.655453258862952,1.20879487306127,0.867894351489069,0,0,0,0,339.725048414168,257.51407544307,0,0,41.3315767435296,51.5379142471563,78.4141167747388,8.84184552424442,18.4922899488387,10.7569081699756,56.2686875328103,89.1380366629501,94.8690667071656,193.435432485928,11.639086987078,0.534196811001766,2.44330439030364,5.93892442701128,7.96470830039777,2.6705869977048,2.41858845571801,0.565815239267694,1.47650946440386,2.76691633149535,4.65170927702798,2.54473610634254,3.92147116223193,6.95280867458795,1.05418608574999,5.15677716240934,150.133866137421,17.4659261210371,8.5376731296618,12.4315480318324,45.0444193451375,34.6035506148017,39.8208629857133,30.4464949114599,0.23467170806371,0,4.85162475720916,0,0,0,0,0.328281799490123,3.20628920292836,312.81248449173,0.170870880797853,0.82554747185289,0.740778109478847,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,2.86401185404534,7.75023184273782,8.53941761932765,7.88438987999149,6.06356058441959,5.45906409365444,4.85511646985355,5.53778153359751,3.14107130380836,2.98114438571124,0.621339313086926,27.0572610568411,0.448549638131936,0,1.36115831840833,1.16243841129958,2.53434188236167,3.28600268208111,2.3436789271911,1.8874681996628,3.62376181239009,17.2818003754719,1.26404448251271,1.21635129174099,0.924398614483445,1.03936658382236,0.716106782669926,0.596044064343795,0.961563596159751,1.03382669022204,1.61546319917036,0.685861259894999,0.201652370273681,0.487289403698762,0.962118416403295,0.818138315270983,0.906921534460845,0.665957860122194,0.0897138566094757,0,2.89784391048286,0.375364950902364,0.915758121336325,0.428736758158132,0.501572104035363,299.883228429662,342.48197596134,338.581248442683,394.574906661107,432.287069975275,426.042158127791,384.762825132129,475.989511808001,496.190937837704,457.182355276857,16.8135503086366,41.8976117071083,28.1710449494321,27.4710590287172,21.7997689133102,13.9721066422011,21.1134391411534,24.3121367541895,29.524567282447,21.9846574234504,26.3618471885849,29.802961939,23.3167353600007,22.4088033417042,22.4572683616448,30.4827962421167,16.5714586101143,18.1334667235883,23.0768104449852,20.75504773895,22.9722399098228,20.4097177083238,21.6976932852062,23.4007730778049,24.3743295275706,20.3075058940024,24.5123483649515,21.3086466264653,20.2348129630334,21.3234063229941,18.9816028998679,19.3068785456104,21.2800142448238,20.9164735601054,15.4325288784913,43.716851139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| |||
|short_description=p1@Mapk10 | |||
}} |
Revision as of 05:45, 14 September 2013
Short description: | p1@Mapk10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mapk10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000060871, ENSMUST00000112846, ENSMUST00000152609_5end |
EntrezGene: | Mapk10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.04e-15 | 33 |
neuronal stem cell | 1.04e-15 | 33 |
neuroblast | 1.04e-15 | 33 |
electrically signaling cell | 1.04e-15 | 33 |
neural cell | 8.98e-15 | 43 |
ectodermal cell | 1.04e-14 | 44 |
neurectodermal cell | 1.04e-14 | 44 |
CNS neuron (sensu Vertebrata) | 3.95e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.95e-13 | 23 |
electrically responsive cell | 4.99e-11 | 39 |
electrically active cell | 4.99e-11 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.76e-36 | 73 |
nervous system | 3.62e-35 | 75 |
neurectoderm | 4.78e-31 | 64 |
neural plate | 4.78e-31 | 64 |
presumptive neural plate | 4.78e-31 | 64 |
structure with developmental contribution from neural crest | 1.26e-29 | 92 |
regional part of nervous system | 8.11e-29 | 54 |
ectoderm-derived structure | 9.10e-29 | 95 |
ectoderm | 9.10e-29 | 95 |
presumptive ectoderm | 9.10e-29 | 95 |
neural tube | 2.03e-27 | 52 |
neural rod | 2.03e-27 | 52 |
future spinal cord | 2.03e-27 | 52 |
neural keel | 2.03e-27 | 52 |
brain | 1.78e-24 | 47 |
future brain | 1.78e-24 | 47 |
ecto-epithelium | 2.89e-24 | 73 |
pre-chordal neural plate | 6.58e-24 | 49 |
regional part of brain | 8.13e-24 | 46 |
anterior neural tube | 3.64e-22 | 40 |
regional part of forebrain | 2.03e-21 | 39 |
forebrain | 2.03e-21 | 39 |
future forebrain | 2.03e-21 | 39 |
gray matter | 1.55e-20 | 34 |
brain grey matter | 6.61e-18 | 29 |
regional part of telencephalon | 6.61e-18 | 29 |
telencephalon | 6.61e-18 | 29 |
cerebral cortex | 3.01e-13 | 21 |
cerebral hemisphere | 3.01e-13 | 21 |
pallium | 3.01e-13 | 21 |
regional part of cerebral cortex | 2.65e-11 | 17 |
occipital lobe | 1.61e-08 | 10 |
visual cortex | 1.61e-08 | 10 |
neocortex | 1.61e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.