FFCP PHASE1:Mm9::chr5:104522382..104522396,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:104522382..104522396,-|id=chr5:104522382..104522396,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,8.72e-07,3;CL:0002610,9.09e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.02e-10!52;UBERON:0005068!1.02e-10!52;UBERON:0006241!1.02e-10!52;UBERON:0007135!1.02e-10!52;UBERON:0000955!5.18e-10!50;UBERON:0006238!5.18e-10!50;UBERON:0002616!1.25e-09!49;UBERON:0000025!1.29e-09!114;UBERON:0002020!3.72e-09!34;UBERON:0004111!7.73e-09!122;UBERON:0001017!1.08e-08!73;UBERON:0005743!1.08e-08!73;UBERON:0000073!2.92e-08!75;UBERON:0001016!2.92e-08!75;UBERON:0002021!2.97e-08!10;UBERON:0000411!2.97e-08!10;UBERON:0001950!2.97e-08!10;UBERON:0000033!5.15e-08!63;UBERON:0002346!5.90e-08!71;UBERON:0003075!5.90e-08!71;UBERON:0007284!5.90e-08!71;UBERON:0003080!4.91e-07!40;UBERON:0002791!8.10e-07!29;UBERON:0003528!8.10e-07!29;UBERON:0001893!8.10e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.44e-22,54;UBERON:0001049,2.67e-19,52;UBERON:0005068,2.67e-19,52;UBERON:0006241,2.67e-19,52;UBERON:0007135,2.67e-19,52;UBERON:0000025,5.14e-17,114;UBERON:0002021,8.05e-17,10;UBERON:0000411,8.05e-17,10;UBERON:0001950,8.05e-17,10;UBERON:0002020,3.12e-16,34;UBERON:0002616,1.71e-15,46;UBERON:0001017,1.80e-15,73;UBERON:0002346,2.43e-15,64;UBERON:0003075,2.43e-15,64;UBERON:0007284,2.43e-15,64;UBERON:0004111,3.52e-15,122;UBERON:0000955,5.05e-15,47;UBERON:0006238,5.05e-15,47;UBERON:0001016,7.86e-15,75;UBERON:0003528,1.05e-13,29;UBERON:0002791,1.05e-13,29;UBERON:0001893,1.05e-13,29;UBERON:0010314,1.02e-12,92;UBERON:0010371,1.78e-12,73;UBERON:0003080,1.79e-12,40;UBERON:0002619,1.97e-12,17;UBERON:0002780,1.51e-11,39;UBERON:0001890,1.51e-11,39;UBERON:0006240,1.51e-11,39;UBERON:0000956,3.46e-11,21;UBERON:0001869,3.46e-11,21;UBERON:0000203,3.46e-11,21;UBERON:0004121,9.55e-11,95;UBERON:0000924,9.55e-11,95;UBERON:0006601,9.55e-11,95;UBERON:0003056,3.42e-10,49;UBERON:0000483,1.17e-08,174;UBERON:0000119,1.95e-08,176;UBERON:0003076,5.46e-08,12;UBERON:0003057,5.46e-08,12;UBERON:0002950,5.98e-08,4;UBERON:0001891,5.98e-08,4;UBERON:0009616,5.98e-08,4;UBERON:0010286,5.98e-08,4;UBERON:0011216,9.58e-08,194;UBERON:0002038,8.72e-07,3;UBERON:0009663,8.72e-07,3;UBERON:0009661,8.72e-07,3;UBERON:0000125,8.72e-07,3;UBERON:0002308,8.72e-07,3;UBERON:0004684,9.09e-07,3;UBERON:0002275,9.09e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.768436610643109,0.103689612308478,0,0.210324961351382,1.71390590642282,0.662605622854841,0.122490799214954,0,0,4.40463523997555,9.83192503255945,13.2101618600369,0.263772575460388,0.0914876436024097,0,6.42120897703176,6.19038871034848,9.93188610549266,12.0797720044204,5.55249555116501,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,1.28326477414318,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0.376999773989026,0,0.144599356919912,0,0.161766849947409,0.883366073841574,0,0,1.17112318804619,2.09446706813455,0,0,0,0,1.64769703345305,1.83000241127451,0.879580464790051,1.73824320192276,2.30143911597297,1.0389402227978,3.24482526135515,1.32391173005411,0.248813941220186,0,0,0.390361328888111,0,0,0.452114453507145,0,0.12811372028485,0.0937017245597288,1.03481348295606,0,0,0,0,0.556094498451196,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0.393528463494808,1.07986979021165,2.09280550275367,0.804820204198858,1.05088808130453,0.658239399653922,2.29834449710733,0.810688095458557,0.292399974850665,1.3173006917463,0.402619256281115,1.68231958851302,1.02904612379284,0,0,0.639864751605702,0.696710015581316,0.128867461322093,0,0,0.570676878337677,0.949058123089023,0.988193728344065,0.754005626400808,0.795825888164603,0.19496408711912,0,1.94524244887225,1.1948476395262,0.189667900953082,0.114248512609729,0,0,0,0.49095073923223,0.189709611372772,0,0.470996183524124,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0,0.325929952884052,0.848725428875941,1.40814148973101,0.502518772325447,1.19021820443007,2.73187107000918,0.945810864637146,1.32878813789265,1.43509291791738,2.45794972073607,2.41758974612254,1.88043776155965,0,0,0,0,1.60550589987792,2.69586879162067,0,0.757412781613119,0.315508219416257,0,0,0,0,0,0,0.584511715822624,0,0.963963949265421,0.567760340833074,0.534196811001766,0.81443479676788,0.989820737835213,0,0.485561272309963,0,1.50884063804718,0,0.307435147943927,1.03371317267288,0.363533729477506,0,0.948110273807448,0,2.06271086496374,0,0,0,0.214337035031592,0.177340233642274,0.713475270408282,0.329098041204242,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:104522382..104522396,- | |||
|id=chr5:104522382..104522396,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,8.72e-07,3;CL:0002610,9.09e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-10!52;UBERON:0005068!1.02e-10!52;UBERON:0006241!1.02e-10!52;UBERON:0007135!1.02e-10!52;UBERON:0000955!5.18e-10!50;UBERON:0006238!5.18e-10!50;UBERON:0002616!1.25e-09!49;UBERON:0000025!1.29e-09!114;UBERON:0002020!3.72e-09!34;UBERON:0004111!7.73e-09!122;UBERON:0001017!1.08e-08!73;UBERON:0005743!1.08e-08!73;UBERON:0000073!2.92e-08!75;UBERON:0001016!2.92e-08!75;UBERON:0002021!2.97e-08!10;UBERON:0000411!2.97e-08!10;UBERON:0001950!2.97e-08!10;UBERON:0000033!5.15e-08!63;UBERON:0002346!5.90e-08!71;UBERON:0003075!5.90e-08!71;UBERON:0007284!5.90e-08!71;UBERON:0003080!4.91e-07!40;UBERON:0002791!8.10e-07!29;UBERON:0003528!8.10e-07!29;UBERON:0001893!8.10e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.44e-22,54;UBERON:0001049,2.67e-19,52;UBERON:0005068,2.67e-19,52;UBERON:0006241,2.67e-19,52;UBERON:0007135,2.67e-19,52;UBERON:0000025,5.14e-17,114;UBERON:0002021,8.05e-17,10;UBERON:0000411,8.05e-17,10;UBERON:0001950,8.05e-17,10;UBERON:0002020,3.12e-16,34;UBERON:0002616,1.71e-15,46;UBERON:0001017,1.80e-15,73;UBERON:0002346,2.43e-15,64;UBERON:0003075,2.43e-15,64;UBERON:0007284,2.43e-15,64;UBERON:0004111,3.52e-15,122;UBERON:0000955,5.05e-15,47;UBERON:0006238,5.05e-15,47;UBERON:0001016,7.86e-15,75;UBERON:0003528,1.05e-13,29;UBERON:0002791,1.05e-13,29;UBERON:0001893,1.05e-13,29;UBERON:0010314,1.02e-12,92;UBERON:0010371,1.78e-12,73;UBERON:0003080,1.79e-12,40;UBERON:0002619,1.97e-12,17;UBERON:0002780,1.51e-11,39;UBERON:0001890,1.51e-11,39;UBERON:0006240,1.51e-11,39;UBERON:0000956,3.46e-11,21;UBERON:0001869,3.46e-11,21;UBERON:0000203,3.46e-11,21;UBERON:0004121,9.55e-11,95;UBERON:0000924,9.55e-11,95;UBERON:0006601,9.55e-11,95;UBERON:0003056,3.42e-10,49;UBERON:0000483,1.17e-08,174;UBERON:0000119,1.95e-08,176;UBERON:0003076,5.46e-08,12;UBERON:0003057,5.46e-08,12;UBERON:0002950,5.98e-08,4;UBERON:0001891,5.98e-08,4;UBERON:0009616,5.98e-08,4;UBERON:0010286,5.98e-08,4;UBERON:0011216,9.58e-08,194;UBERON:0002038,8.72e-07,3;UBERON:0009663,8.72e-07,3;UBERON:0009661,8.72e-07,3;UBERON:0000125,8.72e-07,3;UBERON:0002308,8.72e-07,3;UBERON:0004684,9.09e-07,3;UBERON:0002275,9.09e-07,3 | |||
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|short_description=p@chr5:104522382..104522396,- | |||
}} |
Revision as of 05:47, 14 September 2013
Short description: | p@chr5:104522382..104522396, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:104522382..104522396, - |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 8.72e-07 | 3 |
raphe nuclei neuron | 9.09e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.