FFCP PHASE1:Mm9::chr7:149281148..149281158,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18218|HGNC=|MCL_coexpression_id=13|UniProt=O09112|association_with_transcript=18bp_to_ENSMUST00000039926_5end|description=CAGE_peak_3_at_Dusp8_5end|id=chr7:149281148..149281158,-|ontology_enrichment_celltype=CL:0000117!1.17e-09!23;CL:0000337!1.17e-09!23;CL:0000540!2.65e-09!33;CL:0000047!2.65e-09!33;CL:0000031!2.65e-09!33;CL:0000404!2.65e-09!33;CL:0002319!5.92e-07!43;CL:0000221!6.13e-07!44;CL:0000133!6.13e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-12,23;CL:0000337,1.29e-12,23;CL:0000540,3.62e-11,33;CL:0000047,3.62e-11,33;CL:0000031,3.62e-11,33;CL:0000404,3.62e-11,33;CL:0002319,2.01e-08,43;CL:0000393,4.21e-08,39;CL:0000211,4.21e-08,39;CL:0000221,5.00e-08,44;CL:0000133,5.00e-08,44;CL:0002321,3.34e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.36e-17!73;UBERON:0005743!4.36e-17!73;UBERON:0000073!2.04e-16!75;UBERON:0001016!2.04e-16!75;UBERON:0001049!1.43e-14!52;UBERON:0005068!1.43e-14!52;UBERON:0006241!1.43e-14!52;UBERON:0007135!1.43e-14!52;UBERON:0002020!2.88e-14!34;UBERON:0004121!3.18e-14!102;UBERON:0000924!3.18e-14!102;UBERON:0006601!3.18e-14!102;UBERON:0002346!4.43e-14!71;UBERON:0003075!4.43e-14!71;UBERON:0007284!4.43e-14!71;UBERON:0000033!8.06e-14!63;UBERON:0000955!1.25e-13!50;UBERON:0006238!1.25e-13!50;UBERON:0002616!4.72e-13!49;UBERON:0003056!1.14e-11!49;UBERON:0002791!1.73e-11!29;UBERON:0003528!1.73e-11!29;UBERON:0001893!1.73e-11!29;UBERON:0003080!3.68e-11!40;UBERON:0002780!1.05e-10!39;UBERON:0001890!1.05e-10!39;UBERON:0006240!1.05e-10!39;UBERON:0000956!7.56e-08!21;UBERON:0001869!7.56e-08!21;UBERON:0000203!7.56e-08!21;UBERON:0000025!5.28e-07!114;UBERON:0004111!5.29e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.43e-19,34;UBERON:0001017,4.50e-19,73;UBERON:0010314,6.70e-19,92;UBERON:0001016,4.68e-18,75;UBERON:0000073,1.38e-17,54;UBERON:0002346,3.99e-17,64;UBERON:0003075,3.99e-17,64;UBERON:0007284,3.99e-17,64;UBERON:0001049,5.11e-16,52;UBERON:0005068,5.11e-16,52;UBERON:0006241,5.11e-16,52;UBERON:0007135,5.11e-16,52;UBERON:0003528,3.46e-15,29;UBERON:0002791,3.46e-15,29;UBERON:0001893,3.46e-15,29;UBERON:0004121,1.05e-14,95;UBERON:0000924,1.05e-14,95;UBERON:0006601,1.05e-14,95;UBERON:0010371,5.42e-13,73;UBERON:0000955,8.32e-13,47;UBERON:0006238,8.32e-13,47;UBERON:0002616,4.31e-12,46;UBERON:0003056,4.56e-12,49;UBERON:0003080,3.10e-11,40;UBERON:0002780,1.18e-10,39;UBERON:0001890,1.18e-10,39;UBERON:0006240,1.18e-10,39;UBERON:0000025,2.52e-10,114;UBERON:0000956,4.24e-10,21;UBERON:0001869,4.24e-10,21;UBERON:0000203,4.24e-10,21;UBERON:0004111,1.82e-08,122;UBERON:0002021,2.18e-08,10;UBERON:0000411,2.18e-08,10;UBERON:0001950,2.18e-08,10;UBERON:0002619,2.29e-08,17;UBERON:0000483,7.79e-07,174|phase1_expression=0.480446541314382,3.14077866875425,3.18499467572675,3.32710632437513,7.01254021924886,5.03637815735669,3.50418960893289,0,0.84473233291,0.936258105287974,0,0,0,0.0874204024189974,0.666219523631325,0.607425802169478,1.39912375625629,0,0,0,0.595303031057488,0,0,0.47997726838022,0.45881856213434,5.7423196411502,5.1691439539089,2.58565479223067,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,1.31811709640683,1.1665793944457,0.279972843250725,0,0,0.725362142011344,0,0,0,0,5.46254444320914,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,1.15265491596466,1.45165457231869,1.62007125998029,1.47227472945967,2.28520787523043,4.63823935998388,1.71487118900936,0.958454710182364,0,3.30347642998166,3.31987079021488,2.30409799884365,4.61602007055678,5.30628332893976,4.16730696445408,1.11673199600552,2.8138130501584,1.68078072554491,2.94628585473668,2.98980529678116,4.47358669980721,0.37863096666592,0.302286240427142,4.05810284182349,0,4.75979933595425,0,0,0,0.702222100658759,0,0,0,0.704217098883403,0,0,0,0,0,0.505524445014783,0.22836775943812,0,1.33597925158342,0.693941307064543,0.304465478312141,0.691846491768175,0.452167921657868,0.470354828542819,0,0.247194967734374,0.86759614151947,0,1.13236794963186,1.32504911076236,0.969750506270444,0,2.34224637609238,3.35114730901528,0,1.7972268675888,1.19980546198682,0.381210681219194,2.54644086988199,3.20250421973039,1.88481528169297,3.12883776346098,3.58001640262463,0.62336413367868,2.43361894601636,0.305518091550949,0.497627882440372,0.758168275301024,0,0.130120442962704,0.919608417733892,1.62055916824814,1.65775299619287,1.15662048557257,1.92170580427275,1.68663104207512,1.55222022443409,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.823128545631774,0.199034266818493,0,1.02939162845886,0.568326998791185,1.03562886267751,2.11073453982987,1.62055855314913,2.13070262026689,1.57411385397923,1.69693824176116,1.16266972375204,3.75582761959467,1.16765342367169,1.97471819896177,1.31333971263276,2.35099547682982,1.75439984910399,2.85415149878366,1.47627060636409,1.68231958851302,2.366806084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| ||
|EntrezGene=18218 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=O09112 | |||
|association_with_transcript=18bp_to_ENSMUST00000039926_5end | |||
|description=CAGE_peak_3_at_Dusp8_5end | |||
|id=chr7:149281148..149281158,- | |||
|ontology_enrichment_celltype=CL:0000117!1.17e-09!23;CL:0000337!1.17e-09!23;CL:0000540!2.65e-09!33;CL:0000047!2.65e-09!33;CL:0000031!2.65e-09!33;CL:0000404!2.65e-09!33;CL:0002319!5.92e-07!43;CL:0000221!6.13e-07!44;CL:0000133!6.13e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.29e-12,23;CL:0000337,1.29e-12,23;CL:0000540,3.62e-11,33;CL:0000047,3.62e-11,33;CL:0000031,3.62e-11,33;CL:0000404,3.62e-11,33;CL:0002319,2.01e-08,43;CL:0000393,4.21e-08,39;CL:0000211,4.21e-08,39;CL:0000221,5.00e-08,44;CL:0000133,5.00e-08,44;CL:0002321,3.34e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.36e-17!73;UBERON:0005743!4.36e-17!73;UBERON:0000073!2.04e-16!75;UBERON:0001016!2.04e-16!75;UBERON:0001049!1.43e-14!52;UBERON:0005068!1.43e-14!52;UBERON:0006241!1.43e-14!52;UBERON:0007135!1.43e-14!52;UBERON:0002020!2.88e-14!34;UBERON:0004121!3.18e-14!102;UBERON:0000924!3.18e-14!102;UBERON:0006601!3.18e-14!102;UBERON:0002346!4.43e-14!71;UBERON:0003075!4.43e-14!71;UBERON:0007284!4.43e-14!71;UBERON:0000033!8.06e-14!63;UBERON:0000955!1.25e-13!50;UBERON:0006238!1.25e-13!50;UBERON:0002616!4.72e-13!49;UBERON:0003056!1.14e-11!49;UBERON:0002791!1.73e-11!29;UBERON:0003528!1.73e-11!29;UBERON:0001893!1.73e-11!29;UBERON:0003080!3.68e-11!40;UBERON:0002780!1.05e-10!39;UBERON:0001890!1.05e-10!39;UBERON:0006240!1.05e-10!39;UBERON:0000956!7.56e-08!21;UBERON:0001869!7.56e-08!21;UBERON:0000203!7.56e-08!21;UBERON:0000025!5.28e-07!114;UBERON:0004111!5.29e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.43e-19,34;UBERON:0001017,4.50e-19,73;UBERON:0010314,6.70e-19,92;UBERON:0001016,4.68e-18,75;UBERON:0000073,1.38e-17,54;UBERON:0002346,3.99e-17,64;UBERON:0003075,3.99e-17,64;UBERON:0007284,3.99e-17,64;UBERON:0001049,5.11e-16,52;UBERON:0005068,5.11e-16,52;UBERON:0006241,5.11e-16,52;UBERON:0007135,5.11e-16,52;UBERON:0003528,3.46e-15,29;UBERON:0002791,3.46e-15,29;UBERON:0001893,3.46e-15,29;UBERON:0004121,1.05e-14,95;UBERON:0000924,1.05e-14,95;UBERON:0006601,1.05e-14,95;UBERON:0010371,5.42e-13,73;UBERON:0000955,8.32e-13,47;UBERON:0006238,8.32e-13,47;UBERON:0002616,4.31e-12,46;UBERON:0003056,4.56e-12,49;UBERON:0003080,3.10e-11,40;UBERON:0002780,1.18e-10,39;UBERON:0001890,1.18e-10,39;UBERON:0006240,1.18e-10,39;UBERON:0000025,2.52e-10,114;UBERON:0000956,4.24e-10,21;UBERON:0001869,4.24e-10,21;UBERON:0000203,4.24e-10,21;UBERON:0004111,1.82e-08,122;UBERON:0002021,2.18e-08,10;UBERON:0000411,2.18e-08,10;UBERON:0001950,2.18e-08,10;UBERON:0002619,2.29e-08,17;UBERON:0000483,7.79e-07,174 | |||
|phase1_expression=0.480446541314382,3.14077866875425,3.18499467572675,3.32710632437513,7.01254021924886,5.03637815735669,3.50418960893289,0,0.84473233291,0.936258105287974,0,0,0,0.0874204024189974,0.666219523631325,0.607425802169478,1.39912375625629,0,0,0,0.595303031057488,0,0,0.47997726838022,0.45881856213434,5.7423196411502,5.1691439539089,2.58565479223067,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,1.31811709640683,1.1665793944457,0.279972843250725,0,0,0.725362142011344,0,0,0,0,5.46254444320914,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,1.15265491596466,1.45165457231869,1.62007125998029,1.47227472945967,2.28520787523043,4.63823935998388,1.71487118900936,0.958454710182364,0,3.30347642998166,3.31987079021488,2.30409799884365,4.61602007055678,5.30628332893976,4.16730696445408,1.11673199600552,2.8138130501584,1.68078072554491,2.94628585473668,2.98980529678116,4.47358669980721,0.37863096666592,0.302286240427142,4.05810284182349,0,4.75979933595425,0,0,0,0.702222100658759,0,0,0,0.704217098883403,0,0,0,0,0,0.505524445014783,0.22836775943812,0,1.33597925158342,0.693941307064543,0.304465478312141,0.691846491768175,0.452167921657868,0.470354828542819,0,0.247194967734374,0.86759614151947,0,1.13236794963186,1.32504911076236,0.969750506270444,0,2.34224637609238,3.35114730901528,0,1.7972268675888,1.19980546198682,0.381210681219194,2.54644086988199,3.20250421973039,1.88481528169297,3.12883776346098,3.58001640262463,0.62336413367868,2.43361894601636,0.305518091550949,0.497627882440372,0.758168275301024,0,0.130120442962704,0.919608417733892,1.62055916824814,1.65775299619287,1.15662048557257,1.92170580427275,1.68663104207512,1.55222022443409,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.823128545631774,0.199034266818493,0,1.02939162845886,0.568326998791185,1.03562886267751,2.11073453982987,1.62055855314913,2.13070262026689,1.57411385397923,1.69693824176116,1.16266972375204,3.75582761959467,1.16765342367169,1.97471819896177,1.31333971263276,2.35099547682982,1.75439984910399,2.85415149878366,1.47627060636409,1.68231958851302,2.36680608472354,0.330418782983798,0.793351699990633,0.213288250535234,0,0.902072229254653,0.201683524623343,0.889512175379481,0.570676878337677,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0.342745537829186,0,0.407302655690628,0.775809948670503,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0.393117990226406,0.674586337154561,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.10851914099963,0,0.162964976442026,0,0.234690248288502,0,0.714130922658041,1.17080188714679,1.10344600874334,1.99318220683897,1.43509291791738,0.327726629431476,0.690739927463582,0.578596234326046,0,0,0,0,1.28440471990234,1.52375192569864,0,4.29200576247434,1.57754109708128,0.390438744296638,1.29254038639679,0.477937595905104,0.222798674082394,1.69845918473299,0.404810701674894,2.04579100537918,1.97643888973262,3.85585579706168,0.425820255624806,0.35613120733451,0.162886959353576,0.494910368917606,0,0.728341908464944,0,0,0.590603785761546,0.614870295887855,1.80899805217755,0,0.356497378384721,0.316036757935816,1.05418608574999,2.06271086496374,0.340439605753788,0.540183282093931,0.517434735131018,0.428674070063185,0.886701168211368,0.891844088010353,0.987294123612726,1.2178597964584,0.469343416127421,0.847328283455281,0.882113592219848,0.8244312647074,0,0.603129249281559,0.716234064018819,0.984845398470368,0,1.8542530201051,0.854354403989263,0,0.185194527369712,0.941842285023455,0.546776910884101,0.915112692826091,3.22959016988325,2.6590775941495,1.79659965945751,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0.655087691238533,0.404593039154462,1.07449492442937,0,0.259229946583586,0.621339313086926,0,0,0.330916980914195,0.583353565032143,0.387479470433193,0.168956125490778,0.117357238645754,0.2604087696879,0.419437377702843,0,0.576060012515731,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.680191150845634,0.443971906748129,0.179427713218951,0.167884616364078,0.579568782096571,0.750729901804728,0.36630324853453,0.428736758158132,0.501572104035363,2.82375921308533,5.52390283808612,5.72895513439397,3.26521046453006,4.11049511862385,1.5107877947794,1.35004500046361,3.15224842256954,3.62513927187364,2.5888015587591,0.62272408550506,0.798049746802062,1.02440163452481,1.45864030240976,1.67690530102386,1.2869045591501,1.55572709461131,1.03017528619447,2.24643446714271,2.02157769411038,0.25347929989024,0.377252682772152,0.749132059759059,1.47257850531199,1.03383844120104,0.476293691283074,1.39061191133827,0.964546102318525,0.824171801606613,0.441596760403192,1.02860775715625,0.887379030796687,0.715308569841963,0.581385666529314,1.12931256498397,1.4384483341585,0.182927972872773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| |||
|short_description=p3@Dusp8 | |||
}} |
Revision as of 12:23, 14 September 2013
Short description: | p3@Dusp8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dusp8_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 18bp_to_ENSMUST00000039926_5end |
EntrezGene: | Dusp8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.29e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.29e-12 | 23 |
neuron | 3.62e-11 | 33 |
neuronal stem cell | 3.62e-11 | 33 |
neuroblast | 3.62e-11 | 33 |
electrically signaling cell | 3.62e-11 | 33 |
neural cell | 2.01e-08 | 43 |
electrically responsive cell | 4.21e-08 | 39 |
electrically active cell | 4.21e-08 | 39 |
ectodermal cell | 5.00e-08 | 44 |
neurectodermal cell | 5.00e-08 | 44 |
embryonic cell | 3.34e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.