FFCP PHASE1:Mm9::chr7:31838093..31838109,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56188|HGNC=|MCL_coexpression_id=107|UniProt=|association_with_transcript=31bp_to_uc009ght.2_5end|description=CAGE_peak_6_at_Fxyd1_5end|id=chr7:31838093..31838109,-|ontology_enrichment_celltype=CL:0000107!6.30e-09!9|ontology_enrichment_celltype_v019_2=CL:0000107,6.94e-24,9;CL:0000221,9.80e-12,44;CL:0000133,9.80e-12,44;CL:0002319,2.04e-10,43;CL:0000540,9.95e-08,33;CL:0000047,9.95e-08,33;CL:0000031,9.95e-08,33;CL:0000404,9.95e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.28e-20!102;UBERON:0000924!4.28e-20!102;UBERON:0006601!4.28e-20!102;UBERON:0000073!3.91e-18!75;UBERON:0001016!3.91e-18!75;UBERON:0001017!2.07e-17!73;UBERON:0005743!2.07e-17!73;UBERON:0002346!1.44e-15!71;UBERON:0003075!1.44e-15!71;UBERON:0007284!1.44e-15!71;UBERON:0000033!5.57e-11!63;UBERON:0001049!1.64e-10!52;UBERON:0005068!1.64e-10!52;UBERON:0006241!1.64e-10!52;UBERON:0007135!1.64e-10!52;UBERON:0000010!2.82e-09!11;UBERON:0000955!5.09e-09!50;UBERON:0006238!5.09e-09!50;UBERON:0002410!6.30e-09!9;UBERON:0002616!1.26e-08!49;UBERON:0002021!1.78e-08!10;UBERON:0000411!1.78e-08!10;UBERON:0001950!1.78e-08!10;UBERON:0003076!6.10e-07!12;UBERON:0003057!6.10e-07!12;UBERON:0003056!7.88e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.16e-28,75;UBERON:0004121,1.03e-27,95;UBERON:0000924,1.03e-27,95;UBERON:0006601,1.03e-27,95;UBERON:0001017,3.53e-27,73;UBERON:0002410,6.94e-24,9;UBERON:0000010,2.92e-23,11;UBERON:0002021,1.62e-22,10;UBERON:0000411,1.62e-22,10;UBERON:0001950,1.62e-22,10;UBERON:0002346,4.39e-20,64;UBERON:0003075,4.39e-20,64;UBERON:0007284,4.39e-20,64;UBERON:0010371,1.27e-18,73;UBERON:0002619,6.42e-15,17;UBERON:0001049,3.48e-14,52;UBERON:0005068,3.48e-14,52;UBERON:0006241,3.48e-14,52;UBERON:0007135,3.48e-14,52;UBERON:0000956,5.98e-14,21;UBERON:0001869,5.98e-14,21;UBERON:0000203,5.98e-14,21;UBERON:0010314,1.56e-13,92;UBERON:0002020,1.55e-12,34;UBERON:0000073,6.12e-12,54;UBERON:0002616,1.82e-11,46;UBERON:0003528,3.40e-11,29;UBERON:0002791,3.40e-11,29;UBERON:0001893,3.40e-11,29;UBERON:0000955,3.86e-11,47;UBERON:0006238,3.86e-11,47;UBERON:0003056,4.73e-10,49;UBERON:0000011,2.48e-09,3;UBERON:0000013,4.27e-09,3;UBERON:0002780,6.35e-09,39;UBERON:0001890,6.35e-09,39;UBERON:0006240,6.35e-09,39;UBERON:0010313,1.17e-08,3;UBERON:0002342,1.17e-08,3;UBERON:0002005,1.17e-08,3;UBERON:0005428,1.17e-08,3;UBERON:0005062,1.17e-08,3;UBERON:0003080,1.25e-08,40;UBERON:0011216,1.66e-07,194;UBERON:0003076,3.77e-07,12;UBERON:0003057,3.77e-07,12|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99600110518405,1.15265491596466,0.103689612308478,0,0,1.99955689082663,0.883474163806454,0,0,0,0,0.255374676170375,0.921639199537461,0,0,0,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,1.56608848879013,0,0.151452386666368,1.43585964202892,0,0,0,0,0,0,0,0,0,0,4.50698943285378,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.867426633830679,0.304465478312141,0.922461989024234,0.60289056221049,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,8.19786231632332,4.39838084308256,0,0,0,0,0.599162557619291,1.83000241127451,0.125654352112864,1.56441888173049,0.767146371990992,0.83115217823824,1.1356888414743,0.81471491080253,0,0,0.420883711772948,0,0,0,0.30140963567143,0.476255494059295,1.40925092313335,1.12442069471675,1.55222022443409,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,1.05144974282064,0.205809224758569,0,0,0.213288250535234,0,0.902072229254653,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0.252470927204373,5.04813151066011,4.29482618726302,3.87762115919038,16.2498782607735,12.2539270745317,10.4738316391868,5.66734982344852,11.3979784585412,7.51046778098395,0.642642632843614,0,0.890328018336276,0.977321756121456,0.329940245945071,0,0,0,0.377210159511796,0.590603785761546,0,0,0,0,0,0,0,0,0.720244376125241,0.388076051348264,0,0,0.356737635204141,0.822745103010605,0,0,0,0.441056796109924,0,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,2.22510362412612,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0.954670618015114,0.790839983952838,0.406638934253697,0.108005340821801,0.418176592028937,0.655087691238533,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,0,0.330916980914195,0.583353565032143,0.258319646955462,0.168956125490778,0.704143431874524,0.39061315453185,0.104859344425711,0,0.288030006257865,0,0.608175645870493,0.821687657318618,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0,0,3.3885110557024,3.22227665555024,4.01026859407578,1.89038500578056,1.37016503954128,1.5107877947794,2.70009000092722,1.35096360967266,1.81256963593682,2.07104124700728,0.518936737920883,0.399024873401031,0.512200817262403,0,0.419226325255965,0,0.44449345560323,0,0.64183841918363,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p6@Fxyd1}} | ||
|EntrezGene=56188 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt= | |||
|association_with_transcript=31bp_to_uc009ght.2_5end | |||
|description=CAGE_peak_6_at_Fxyd1_5end | |||
|id=chr7:31838093..31838109,- | |||
|ontology_enrichment_celltype=CL:0000107!6.30e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.94e-24,9;CL:0000221,9.80e-12,44;CL:0000133,9.80e-12,44;CL:0002319,2.04e-10,43;CL:0000540,9.95e-08,33;CL:0000047,9.95e-08,33;CL:0000031,9.95e-08,33;CL:0000404,9.95e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.28e-20!102;UBERON:0000924!4.28e-20!102;UBERON:0006601!4.28e-20!102;UBERON:0000073!3.91e-18!75;UBERON:0001016!3.91e-18!75;UBERON:0001017!2.07e-17!73;UBERON:0005743!2.07e-17!73;UBERON:0002346!1.44e-15!71;UBERON:0003075!1.44e-15!71;UBERON:0007284!1.44e-15!71;UBERON:0000033!5.57e-11!63;UBERON:0001049!1.64e-10!52;UBERON:0005068!1.64e-10!52;UBERON:0006241!1.64e-10!52;UBERON:0007135!1.64e-10!52;UBERON:0000010!2.82e-09!11;UBERON:0000955!5.09e-09!50;UBERON:0006238!5.09e-09!50;UBERON:0002410!6.30e-09!9;UBERON:0002616!1.26e-08!49;UBERON:0002021!1.78e-08!10;UBERON:0000411!1.78e-08!10;UBERON:0001950!1.78e-08!10;UBERON:0003076!6.10e-07!12;UBERON:0003057!6.10e-07!12;UBERON:0003056!7.88e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.16e-28,75;UBERON:0004121,1.03e-27,95;UBERON:0000924,1.03e-27,95;UBERON:0006601,1.03e-27,95;UBERON:0001017,3.53e-27,73;UBERON:0002410,6.94e-24,9;UBERON:0000010,2.92e-23,11;UBERON:0002021,1.62e-22,10;UBERON:0000411,1.62e-22,10;UBERON:0001950,1.62e-22,10;UBERON:0002346,4.39e-20,64;UBERON:0003075,4.39e-20,64;UBERON:0007284,4.39e-20,64;UBERON:0010371,1.27e-18,73;UBERON:0002619,6.42e-15,17;UBERON:0001049,3.48e-14,52;UBERON:0005068,3.48e-14,52;UBERON:0006241,3.48e-14,52;UBERON:0007135,3.48e-14,52;UBERON:0000956,5.98e-14,21;UBERON:0001869,5.98e-14,21;UBERON:0000203,5.98e-14,21;UBERON:0010314,1.56e-13,92;UBERON:0002020,1.55e-12,34;UBERON:0000073,6.12e-12,54;UBERON:0002616,1.82e-11,46;UBERON:0003528,3.40e-11,29;UBERON:0002791,3.40e-11,29;UBERON:0001893,3.40e-11,29;UBERON:0000955,3.86e-11,47;UBERON:0006238,3.86e-11,47;UBERON:0003056,4.73e-10,49;UBERON:0000011,2.48e-09,3;UBERON:0000013,4.27e-09,3;UBERON:0002780,6.35e-09,39;UBERON:0001890,6.35e-09,39;UBERON:0006240,6.35e-09,39;UBERON:0010313,1.17e-08,3;UBERON:0002342,1.17e-08,3;UBERON:0002005,1.17e-08,3;UBERON:0005428,1.17e-08,3;UBERON:0005062,1.17e-08,3;UBERON:0003080,1.25e-08,40;UBERON:0011216,1.66e-07,194;UBERON:0003076,3.77e-07,12;UBERON:0003057,3.77e-07,12 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99600110518405,1.15265491596466,0.103689612308478,0,0,1.99955689082663,0.883474163806454,0,0,0,0,0.255374676170375,0.921639199537461,0,0,0,0.558365998002762,0.56276261003168,0.763991238884051,0.883885756421003,1.56608848879013,0,0.151452386666368,1.43585964202892,0,0,0,0,0,0,0,0,0,0,4.50698943285378,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.867426633830679,0.304465478312141,0.922461989024234,0.60289056221049,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,8.19786231632332,4.39838084308256,0,0,0,0,0.599162557619291,1.83000241127451,0.125654352112864,1.56441888173049,0.767146371990992,0.83115217823824,1.1356888414743,0.81471491080253,0,0,0.420883711772948,0,0,0,0.30140963567143,0.476255494059295,1.40925092313335,1.12442069471675,1.55222022443409,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0,1.05144974282064,0.205809224758569,0,0,0.213288250535234,0,0.902072229254653,0,0.22237804384487,0.380451252225118,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.568474235311454,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0.252470927204373,5.04813151066011,4.29482618726302,3.87762115919038,16.2498782607735,12.2539270745317,10.4738316391868,5.66734982344852,11.3979784585412,7.51046778098395,0.642642632843614,0,0.890328018336276,0.977321756121456,0.329940245945071,0,0,0,0.377210159511796,0.590603785761546,0,0,0,0,0,0,0,0,0.720244376125241,0.388076051348264,0,0,0.356737635204141,0.822745103010605,0,0,0,0.441056796109924,0,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,2.22510362412612,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0.954670618015114,0.790839983952838,0.406638934253697,0.108005340821801,0.418176592028937,0.655087691238533,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,0,0.330916980914195,0.583353565032143,0.258319646955462,0.168956125490778,0.704143431874524,0.39061315453185,0.104859344425711,0,0.288030006257865,0,0.608175645870493,0.821687657318618,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0,0,3.3885110557024,3.22227665555024,4.01026859407578,1.89038500578056,1.37016503954128,1.5107877947794,2.70009000092722,1.35096360967266,1.81256963593682,2.07104124700728,0.518936737920883,0.399024873401031,0.512200817262403,0,0.419226325255965,0,0.44449345560323,0,0.64183841918363,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p6@Fxyd1 | |||
}} |
Revision as of 13:18, 14 September 2013
Short description: | p6@Fxyd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fxyd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 31bp_to_uc009ght.2_5end |
EntrezGene: | Fxyd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 6.94e-24 | 9 |
ectodermal cell | 9.80e-12 | 44 |
neurectodermal cell | 9.80e-12 | 44 |
neural cell | 2.04e-10 | 43 |
neuron | 9.95e-08 | 33 |
neuronal stem cell | 9.95e-08 | 33 |
neuroblast | 9.95e-08 | 33 |
electrically signaling cell | 9.95e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.