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FFCP PHASE1:Mm9::chr7:67123756..67123760,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=145|UniProt=|association_with_transcript=0bp_to_ENSMUST00000104003_5end|description=CAGE_peak_1_at_ENSMUST00000104003_5end|id=chr7:67123756..67123760,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,8.37e-09,23;CL:0000337,8.37e-09,23;CL:0000540,7.36e-07,33;CL:0000047,7.36e-07,33;CL:0000031,7.36e-07,33;CL:0000404,7.36e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.09e-17!63;UBERON:0002346!3.85e-17!71;UBERON:0003075!3.85e-17!71;UBERON:0007284!3.85e-17!71;UBERON:0001049!6.11e-16!52;UBERON:0005068!6.11e-16!52;UBERON:0006241!6.11e-16!52;UBERON:0007135!6.11e-16!52;UBERON:0001017!1.62e-15!73;UBERON:0005743!1.62e-15!73;UBERON:0000073!3.55e-15!75;UBERON:0001016!3.55e-15!75;UBERON:0000955!6.43e-15!50;UBERON:0006238!6.43e-15!50;UBERON:0002616!2.13e-14!49;UBERON:0003056!4.54e-14!49;UBERON:0004121!5.56e-14!102;UBERON:0000924!5.56e-14!102;UBERON:0006601!5.56e-14!102;UBERON:0002020!4.82e-13!34;UBERON:0003080!1.59e-11!40;UBERON:0002780!6.44e-11!39;UBERON:0001890!6.44e-11!39;UBERON:0006240!6.44e-11!39;UBERON:0002791!2.44e-10!29;UBERON:0003528!2.44e-10!29;UBERON:0001893!2.44e-10!29;UBERON:0007811!1.73e-08!86;UBERON:0000025!1.76e-08!114;UBERON:0004111!6.03e-08!122;UBERON:0002021!7.44e-08!10;UBERON:0000411!7.44e-08!10;UBERON:0001950!7.44e-08!10;UBERON:0000468!7.82e-08!333;UBERON:0000153!1.69e-07!94;UBERON:0000956!2.44e-07!21;UBERON:0001869!2.44e-07!21;UBERON:0000203!2.44e-07!21;UBERON:0000922!7.51e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.05e-25,64;UBERON:0003075,1.05e-25,64;UBERON:0007284,1.05e-25,64;UBERON:0000073,1.75e-24,54;UBERON:0010314,6.32e-24,92;UBERON:0001049,1.71e-22,52;UBERON:0005068,1.71e-22,52;UBERON:0006241,1.71e-22,52;UBERON:0007135,1.71e-22,52;UBERON:0010371,1.05e-21,73;UBERON:0001017,7.91e-21,73;UBERON:0001016,7.36e-20,75;UBERON:0002020,9.91e-20,34;UBERON:0004121,4.08e-19,95;UBERON:0000924,4.08e-19,95;UBERON:0006601,4.08e-19,95;UBERON:0003056,9.08e-19,49;UBERON:0000955,4.86e-18,47;UBERON:0006238,4.86e-18,47;UBERON:0002616,3.03e-17,46;UBERON:0003528,2.58e-15,29;UBERON:0002791,2.58e-15,29;UBERON:0001893,2.58e-15,29;UBERON:0003080,4.12e-15,40;UBERON:0002780,3.59e-14,39;UBERON:0001890,3.59e-14,39;UBERON:0006240,3.59e-14,39;UBERON:0002021,6.20e-12,10;UBERON:0000411,6.20e-12,10;UBERON:0001950,6.20e-12,10;UBERON:0000956,1.83e-11,21;UBERON:0001869,1.83e-11,21;UBERON:0000203,1.83e-11,21;UBERON:0000025,2.81e-09,114;UBERON:0002619,1.12e-08,17;UBERON:0004111,2.52e-08,122;UBERON:0003076,2.88e-08,12;UBERON:0003057,2.88e-08,12;UBERON:0002240,6.73e-07,6;UBERON:0005174,6.73e-07,6;UBERON:0001137,6.73e-07,6|phase1_expression=1.44133962394315,0,0,0,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,2.69592992002042,1.35005938331691,1.47227472945967,2.28520787523043,2.42955395046775,0.244981598429908,0.287536413054709,0,4.40463523997555,6.00130489000382,11.981309593987,0.131886287730194,0.823388792421687,2.08365348222704,5.02529398202486,6.19038871034848,8.40390362772456,12.0797720044204,5.41012387036591,3.54158947068071,0.227178579999552,0.302286240427142,0,0,0,0.539703191637817,1.29955283489534,0.896053774194671,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0.148442139064825,0.520455980298408,0.913396434936424,0,1.20578112442098,1.17588707135705,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,3.77004072264219,0,0,0,0,8.98743836428936,7.32000964509802,7.16229807043327,7.47444576826789,7.16003280524926,7.06479351502504,7.13861557498134,0.305518091550949,0.124406970610093,0.252722758433675,0,1.56144531555244,0.919608417733892,1.26043490863744,5.12396380641431,2.24520447199382,3.45907044769094,1.59292931751539,3.62184719034622,0.431135985865684,0.378212160335639,0.351902248327898,0,0.834141747676794,0.348252166522167,0,0.796137067273973,0,0,0,0,1.17263029990548,0.900310307305074,0.710234206755631,0.590292695242212,1.85120535464854,1.86027155800326,0.536546802799238,1.40118410840603,0.658239399653922,2.46251196118643,2.51313309592153,1.75439984910399,3.73235195994786,0.805238512562231,9.04246778825747,5.86556290561921,0,0,0.639864751605702,1.39342003116263,0.128867461322093,0.605050573870028,0,0,0,0.494096864172033,0,0.397912944082302,0.19496408711912,0.898819408654221,1.72910439899755,0.398282546508734,0.189667900953082,0.799739588268102,0,1.62921062276251,0.969762435838129,0.841629838683823,0.252946148497029,0.442830443938806,1.09899109488962,0.123397163921801,0.296452627087149,0,0,0.449724224769707,0,0.482354319504834,0,0.287696137450811,0.486405680325106,0,4.31304619582064,0,0,0,0.1793974135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|EntrezGene=
|HGNC=
|MCL_coexpression_id=145
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000104003_5end
|description=CAGE_peak_1_at_ENSMUST00000104003_5end
|id=chr7:67123756..67123760,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,8.37e-09,23;CL:0000337,8.37e-09,23;CL:0000540,7.36e-07,33;CL:0000047,7.36e-07,33;CL:0000031,7.36e-07,33;CL:0000404,7.36e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.09e-17!63;UBERON:0002346!3.85e-17!71;UBERON:0003075!3.85e-17!71;UBERON:0007284!3.85e-17!71;UBERON:0001049!6.11e-16!52;UBERON:0005068!6.11e-16!52;UBERON:0006241!6.11e-16!52;UBERON:0007135!6.11e-16!52;UBERON:0001017!1.62e-15!73;UBERON:0005743!1.62e-15!73;UBERON:0000073!3.55e-15!75;UBERON:0001016!3.55e-15!75;UBERON:0000955!6.43e-15!50;UBERON:0006238!6.43e-15!50;UBERON:0002616!2.13e-14!49;UBERON:0003056!4.54e-14!49;UBERON:0004121!5.56e-14!102;UBERON:0000924!5.56e-14!102;UBERON:0006601!5.56e-14!102;UBERON:0002020!4.82e-13!34;UBERON:0003080!1.59e-11!40;UBERON:0002780!6.44e-11!39;UBERON:0001890!6.44e-11!39;UBERON:0006240!6.44e-11!39;UBERON:0002791!2.44e-10!29;UBERON:0003528!2.44e-10!29;UBERON:0001893!2.44e-10!29;UBERON:0007811!1.73e-08!86;UBERON:0000025!1.76e-08!114;UBERON:0004111!6.03e-08!122;UBERON:0002021!7.44e-08!10;UBERON:0000411!7.44e-08!10;UBERON:0001950!7.44e-08!10;UBERON:0000468!7.82e-08!333;UBERON:0000153!1.69e-07!94;UBERON:0000956!2.44e-07!21;UBERON:0001869!2.44e-07!21;UBERON:0000203!2.44e-07!21;UBERON:0000922!7.51e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.05e-25,64;UBERON:0003075,1.05e-25,64;UBERON:0007284,1.05e-25,64;UBERON:0000073,1.75e-24,54;UBERON:0010314,6.32e-24,92;UBERON:0001049,1.71e-22,52;UBERON:0005068,1.71e-22,52;UBERON:0006241,1.71e-22,52;UBERON:0007135,1.71e-22,52;UBERON:0010371,1.05e-21,73;UBERON:0001017,7.91e-21,73;UBERON:0001016,7.36e-20,75;UBERON:0002020,9.91e-20,34;UBERON:0004121,4.08e-19,95;UBERON:0000924,4.08e-19,95;UBERON:0006601,4.08e-19,95;UBERON:0003056,9.08e-19,49;UBERON:0000955,4.86e-18,47;UBERON:0006238,4.86e-18,47;UBERON:0002616,3.03e-17,46;UBERON:0003528,2.58e-15,29;UBERON:0002791,2.58e-15,29;UBERON:0001893,2.58e-15,29;UBERON:0003080,4.12e-15,40;UBERON:0002780,3.59e-14,39;UBERON:0001890,3.59e-14,39;UBERON:0006240,3.59e-14,39;UBERON:0002021,6.20e-12,10;UBERON:0000411,6.20e-12,10;UBERON:0001950,6.20e-12,10;UBERON:0000956,1.83e-11,21;UBERON:0001869,1.83e-11,21;UBERON:0000203,1.83e-11,21;UBERON:0000025,2.81e-09,114;UBERON:0002619,1.12e-08,17;UBERON:0004111,2.52e-08,122;UBERON:0003076,2.88e-08,12;UBERON:0003057,2.88e-08,12;UBERON:0002240,6.73e-07,6;UBERON:0005174,6.73e-07,6;UBERON:0001137,6.73e-07,6
|phase1_expression=1.44133962394315,0,0,0,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.61853168687678,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,2.69592992002042,1.35005938331691,1.47227472945967,2.28520787523043,2.42955395046775,0.244981598429908,0.287536413054709,0,4.40463523997555,6.00130489000382,11.981309593987,0.131886287730194,0.823388792421687,2.08365348222704,5.02529398202486,6.19038871034848,8.40390362772456,12.0797720044204,5.41012387036591,3.54158947068071,0.227178579999552,0.302286240427142,0,0,0,0.539703191637817,1.29955283489534,0.896053774194671,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0.148442139064825,0.520455980298408,0.913396434936424,0,1.20578112442098,1.17588707135705,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,3.77004072264219,0,0,0,0,8.98743836428936,7.32000964509802,7.16229807043327,7.47444576826789,7.16003280524926,7.06479351502504,7.13861557498134,0.305518091550949,0.124406970610093,0.252722758433675,0,1.56144531555244,0.919608417733892,1.26043490863744,5.12396380641431,2.24520447199382,3.45907044769094,1.59292931751539,3.62184719034622,0.431135985865684,0.378212160335639,0.351902248327898,0,0.834141747676794,0.348252166522167,0,0.796137067273973,0,0,0,0,1.17263029990548,0.900310307305074,0.710234206755631,0.590292695242212,1.85120535464854,1.86027155800326,0.536546802799238,1.40118410840603,0.658239399653922,2.46251196118643,2.51313309592153,1.75439984910399,3.73235195994786,0.805238512562231,9.04246778825747,5.86556290561921,0,0,0.639864751605702,1.39342003116263,0.128867461322093,0.605050573870028,0,0,0,0.494096864172033,0,0.397912944082302,0.19496408711912,0.898819408654221,1.72910439899755,0.398282546508734,0.189667900953082,0.799739588268102,0,1.62921062276251,0.969762435838129,0.841629838683823,0.252946148497029,0.442830443938806,1.09899109488962,0.123397163921801,0.296452627087149,0,0,0.449724224769707,0,0.482354319504834,0,0.287696137450811,0.486405680325106,0,4.31304619582064,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.37898282354097,0.488894929326078,0,0.469380496577004,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.327726629431476,0,0.433947175744535,0,0,0.491764273019036,0,5.29816946959713,7.3843362553088,0,0.504941854408746,0,0.390438744296638,1.29254038639679,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,1.16902343164525,0.790575555893047,3.21321316421807,0.141940085208269,0,0.651547837414304,0,0,1.69946445308487,0.604647113929502,1.69744571780308,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0.340439605753788,1.62054984628179,0,0.643011105094777,0.354680467284547,0.713475270408282,1.31639216481697,0.304464949114599,0.469343416127421,0.42366414172764,0.441056796109924,0,0.645857706783622,0,0,0,1.1659233465194,6.48988557036784,0,0,0.370389054739423,0.188368457004691,0.27338845544205,0,0,0,0,0.954670618015114,0.790839983952838,0.406638934253697,0.972048067396211,0.627264888043406,1.52853794622324,0.674321731924103,0.247960367176008,0.523511883968059,0.518459893167171,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0,0.337912250981556,0.821500670520278,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0.202725215290164,1.1298205288131,0.909445760844565,0.358053391334963,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0.335769232728157,0.19318959403219,0,0.183151624267265,0,0,30.4965995013216,9.20650473014354,12.6037012956667,10.3111909406213,5.48066015816514,3.0215755895588,5.40018000185445,9.45674526770863,3.17199686288943,12.9440077937955,1.66059756134683,1.19707462020309,0.512200817262403,1.94485373654635,0.838452650511929,0,2.00022055021454,1.23621034343337,0.64183841918363,1.76888048234658,0.760437899670719,0.754505365544305,0.561849044819294,0.768301828858431,1.03383844120104,1.42888107384922,0.231768651889711,0.77163688185482,1.23625770240992,1.32479028120958,1.02860775715625,1.95223386775271,1.1921809497366,1.30811774969096,0.564656282491984,1.18460451048347,1.09756783723664,2.63069711437843,0.814824683075171,0,1.54225523561426,0.985044823755635,1.22769312950907,1.08455788830176,0,0.499621155875892,0.935726433781634,0.214871054048298,0.191288332068843,0,0.463735671240843
|short_description=p1@ENSMUST00000104003
}}

Revision as of 14:00, 14 September 2013

Short description:p1@ENSMUST00000104003
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_ENSMUST00000104003_5end
Coexpression cluster:MCL_coexpression_mm9:145
Association with transcript: 0bp_to_ENSMUST00000104003_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@ENSMUST00000104003

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.99
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D57.47
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G15.87
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A37.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A130.50
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.37e-0923
neuroblast (sensu Vertebrata)8.37e-0923
neuron7.36e-0733
neuronal stem cell7.36e-0733
neuroblast7.36e-0733
electrically signaling cell7.36e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm1.05e-2564
neural plate1.05e-2564
presumptive neural plate1.05e-2564
regional part of nervous system1.75e-2454
structure with developmental contribution from neural crest6.32e-2492
neural tube1.71e-2252
neural rod1.71e-2252
future spinal cord1.71e-2252
neural keel1.71e-2252
ecto-epithelium1.05e-2173
central nervous system7.91e-2173
nervous system7.36e-2075
gray matter9.91e-2034
ectoderm-derived structure4.08e-1995
ectoderm4.08e-1995
presumptive ectoderm4.08e-1995
pre-chordal neural plate9.08e-1949
brain4.86e-1847
future brain4.86e-1847
regional part of brain3.03e-1746
brain grey matter2.58e-1529
regional part of telencephalon2.58e-1529
telencephalon2.58e-1529
anterior neural tube4.12e-1540
regional part of forebrain3.59e-1439
forebrain3.59e-1439
future forebrain3.59e-1439
occipital lobe6.20e-1210
visual cortex6.20e-1210
neocortex6.20e-1210
cerebral cortex1.83e-1121
cerebral hemisphere1.83e-1121
pallium1.83e-1121
tube2.81e-09114
regional part of cerebral cortex1.12e-0817
anatomical conduit2.52e-08122
posterior neural tube2.88e-0812
chordal neural plate2.88e-0812
spinal cord6.73e-076
dorsal region element6.73e-076
dorsum6.73e-076







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