FFCP PHASE1:Hg19::chr1:110738238..110738245,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=388662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31399 | |||
|TSSclassifier=weak | |||
|UniProt=B4DME5 | |||
|association_with_transcript=-26bp_to_AK297429_5end | |||
|coexpression_cluster_id=C2410 | |||
|description=CAGE_peak_5_at_SLC6A17_5end | |||
|id=chr1:110738238..110738245,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.20e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.75e-56!57;UBERON:0005068!4.75e-56!57;UBERON:0006241!4.75e-56!57;UBERON:0007135!4.75e-56!57;UBERON:0002616!9.98e-54!59;UBERON:0000955!3.21e-52!69;UBERON:0006238!3.21e-52!69;UBERON:0002780!2.21e-48!41;UBERON:0001890!2.21e-48!41;UBERON:0006240!2.21e-48!41;UBERON:0001017!3.60e-47!82;UBERON:0003080!4.70e-47!42;UBERON:0005743!8.57e-47!86;UBERON:0002020!8.25e-44!34;UBERON:0003528!8.25e-44!34;UBERON:0001893!9.42e-44!34;UBERON:0002791!2.44e-41!33;UBERON:0000073!2.50e-41!94;UBERON:0001016!2.50e-41!94;UBERON:0001869!8.76e-40!32;UBERON:0003075!8.11e-38!86;UBERON:0007284!8.11e-38!86;UBERON:0007023!1.96e-36!115;UBERON:0002619!4.59e-36!22;UBERON:0001950!1.13e-35!20;UBERON:0002346!1.14e-35!90;UBERON:0003056!3.18e-32!61;UBERON:0000956!2.70e-31!25;UBERON:0000203!2.70e-31!25;UBERON:0000033!9.04e-28!123;UBERON:0000153!5.71e-26!129;UBERON:0007811!5.71e-26!129;UBERON:0004121!1.63e-20!169;UBERON:0000924!8.89e-20!173;UBERON:0006601!8.89e-20!173;UBERON:0000200!2.02e-17!6;UBERON:0000025!1.18e-15!194;UBERON:0002420!4.25e-14!9;UBERON:0007245!4.25e-14!9;UBERON:0010009!4.25e-14!9;UBERON:0010011!4.25e-14!9;UBERON:0000454!4.25e-14!9;UBERON:0002308!7.77e-14!9;UBERON:0000125!7.77e-14!9;UBERON:0001871!1.28e-12!7;UBERON:0004111!6.40e-12!241;UBERON:0000369!2.29e-11!4;UBERON:0002435!2.29e-11!4;UBERON:0000204!2.29e-11!4;UBERON:0010082!2.29e-11!4;UBERON:0002298!2.84e-11!8;UBERON:0000475!1.51e-10!365;UBERON:0003076!2.18e-10!15;UBERON:0003057!2.18e-10!15;UBERON:0004733!3.29e-10!12;UBERON:0002028!3.29e-10!12;UBERON:0007277!3.29e-10!12;UBERON:0001872!6.98e-10!5;UBERON:0000483!7.28e-10!309;UBERON:0000119!1.18e-09!312;UBERON:0000477!1.39e-09!286;UBERON:0009663!1.81e-09!7;UBERON:0002771!2.14e-09!3;UBERON:0004732!2.45e-09!13;UBERON:0005383!3.33e-09!3;UBERON:0005382!3.33e-09!3;UBERON:0002021!5.51e-09!5;UBERON:0000349!5.86e-09!5;UBERON:0000988!7.50e-09!3;UBERON:0006331!1.89e-08!3;UBERON:0000064!5.40e-08!219;UBERON:0002680!1.45e-07!9;UBERON:0001895!1.45e-07!9;UBERON:0010092!1.45e-07!9;UBERON:0001870!5.96e-07!2;UBERON:0001876!9.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.40e-47;20!UBERON:0002619;1.03e-42;22!UBERON:0001893;2.71e-41;34!UBERON:0001869;3.33e-41;32!UBERON:0000956;1.08e-37;25!UBERON:0000203;1.08e-37;25!UBERON:0003528;1.30e-33;34!UBERON:0002020;1.30e-33;34!UBERON:0002791;1.39e-33;32!UBERON:0000200;1.52e-33;6!UBERON:0000955;2.29e-23;68!UBERON:0001872;4.19e-23;5!UBERON:0002780;1.94e-19;41!UBERON:0001890;1.94e-19;41!UBERON:0001017;2.76e-17;75!UBERON:0000073;3.22e-17;53!UBERON:0002616;3.22e-17;53!UBERON:0001871;7.32e-17;6!UBERON:0002581;5.49e-14;1!UBERON:0002902;1.18e-13;1!UBERON:0001874;1.18e-13;1!UBERON:0009899;1.18e-13;1!UBERON:0007190;1.18e-13;1!UBERON:0001016;8.00e-11;83!UBERON:0002021;8.29e-11;5!UBERON:0002771;9.25e-08;2!UBERON:0001876;1.05e-07;2!UBERON:0002702;1.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,5.23e-47,20;UBERON:0001869,3.52e-44,32;UBERON:0002619,7.49e-43,22;UBERON:0001893,1.37e-41,34;UBERON:0000956,8.16e-38,25;UBERON:0000203,8.16e-38,25;UBERON:0002791,1.50e-36,32;UBERON:0002780,1.82e-34,41;UBERON:0001890,1.82e-34,41;UBERON:0003080,1.82e-34,41;UBERON:0006240,1.82e-34,41;UBERON:0003528,2.10e-34,34;UBERON:0002020,2.10e-34,34;UBERON:0000200,1.34e-33,6;UBERON:0000955,4.27e-33,68;UBERON:0006238,4.27e-33,68;UBERON:0000073,1.19e-31,53;UBERON:0002616,1.19e-31,53;UBERON:0001049,6.50e-30,56;UBERON:0005068,6.50e-30,56;UBERON:0006241,6.50e-30,56;UBERON:0007135,6.50e-30,56;UBERON:0001017,1.13e-27,81;UBERON:0001016,8.17e-25,89;UBERON:0001872,2.99e-23,5;UBERON:0003056,5.92e-23,61;UBERON:0003075,4.14e-20,82;UBERON:0007284,4.14e-20,82;UBERON:0007023,1.02e-19,114;UBERON:0002346,4.05e-19,86;UBERON:0001871,6.41e-17,6;UBERON:0010371,1.37e-15,104;UBERON:0002581,5.85e-14,1;UBERON:0001874,8.58e-14,1;UBERON:0007190,1.42e-13,1;UBERON:0002902,1.83e-13,1;UBERON:0009899,1.83e-13,1;UBERON:0004121,2.47e-12,171;UBERON:0000924,2.47e-12,171;UBERON:0006601,2.47e-12,171;UBERON:0010314,5.44e-12,132;UBERON:0002021,1.01e-10,5;UBERON:0011216,4.93e-09,223;UBERON:0000025,9.05e-08,192;UBERON:0002771,9.25e-08,2;UBERON:0001876,9.87e-08,2;UBERON:0002702,1.45e-07,2 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507983154337352,1.14596527667483,0,0,0.102827492703324,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,1.02044907978036,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.552896299656123,1.47773809476774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.789744236554321,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,6.10131324509816,0.876336514945499,0,0.110929051536852,0.434674820589684,0.138348634936231,0,0,0.570930667089935,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0.159633859057151,0.205116364240755,0,1.03735878696327,0.161475645631851,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,1.2156765231311,2.34323429584154,1.86018116851066,0.760989722326882,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,0.543757863814654,2.03895598044832,0,0,0,1.72827148907602,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0.150962843566674,0,0,4.23285566725371,0,0.235676547101626,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.49581278420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SLC6A17 | |||
}} |
Revision as of 20:03, 10 January 2014
Short description: | p5@SLC6A17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC6A17_5end |
Coexpression cluster: | C2410_medial_amygdala_brain_smallcell_putamen_cerebellum_parietal |
Association with transcript: | -26bp_to_AK297429_5end |
EntrezGene: | SLC6A17 |
HGNC: | 31399 |
UniProt: | B4DME5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data