FFCP PHASE1:Hg19::chr4:36245985..36246005,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116984 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16924 | |||
|TSSclassifier=strong | |||
|UniProt=A7E2A5,Q8WZ64 | |||
|association_with_transcript=-6bp_to_NM_015230,uc003gsq.1_5end | |||
|coexpression_cluster_id=C1522 | |||
|description=CAGE_peak_3_at_ARAP2_5end | |||
|id=chr4:36245985..36246005,- | |||
|ontology_enrichment_celltype=CL:0000738!8.77e-42!140;CL:0000037!1.03e-34!172;CL:0000566!1.03e-34!172;CL:0002087!7.69e-33!119;CL:0000988!3.86e-32!182;CL:0002031!1.58e-31!124;CL:0002032!1.05e-30!165;CL:0000837!1.05e-30!165;CL:0000542!8.60e-25!53;CL:0000051!8.60e-25!53;CL:0000838!1.30e-24!52;CL:0000084!4.89e-14!25;CL:0000827!4.89e-14!25;CL:0000791!1.06e-13!18;CL:0000789!1.06e-13!18;CL:0002420!1.06e-13!18;CL:0002419!1.06e-13!18;CL:0000790!1.06e-13!18;CL:0002057!2.19e-12!42;CL:0000766!3.88e-12!76;CL:0000860!4.49e-12!45;CL:0000557!1.45e-10!71;CL:0000763!3.96e-10!112;CL:0000049!3.96e-10!112;CL:0000945!9.09e-10!24;CL:0000826!9.09e-10!24;CL:0002009!1.12e-09!65;CL:0000625!4.75e-09!11;CL:0000839!5.28e-09!70;CL:0002194!7.08e-09!63;CL:0000576!7.08e-09!63;CL:0000040!7.08e-09!63;CL:0000559!7.08e-09!63;CL:0000236!5.12e-08!14;CL:0000451!7.02e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.61e-18;18!CL:0000789;1.61e-18;18!CL:0002419;1.61e-18;18!CL:0000084;2.59e-17;25!CL:0000542;2.18e-16;53!CL:0000625;5.22e-12;11!CL:0002087;1.00e-11;104!CL:0000945;2.05e-09;24!CL:0000738;4.31e-09;136!CL:0000236;9.47e-09;13!CL:0000451;1.10e-08;10!CL:0000624;2.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.02e-45,136;CL:0002087,2.89e-36,115;CL:0000037,2.10e-35,168;CL:0000988,1.83e-34,177;CL:0002031,3.84e-32,120;CL:0002032,4.33e-31,161;CL:0000837,4.33e-31,161;CL:0000542,1.25e-28,53;CL:0000051,1.25e-28,53;CL:0000838,2.37e-28,52;CL:0000791,1.79e-18,18;CL:0000789,1.79e-18,18;CL:0002420,1.79e-18,18;CL:0002419,1.79e-18,18;CL:0000790,1.79e-18,18;CL:0000084,1.74e-17,25;CL:0000827,1.74e-17,25;CL:0000625,5.40e-12,11;CL:0000860,1.22e-11,42;CL:0002057,1.22e-11,42;CL:0000766,2.76e-11,72;CL:0000945,1.19e-09,24;CL:0000826,1.19e-09,24;CL:0002009,1.28e-09,61;CL:0000236,1.45e-09,14;CL:0000557,3.38e-09,67;CL:0000473,5.38e-09,48;CL:0000234,5.38e-09,48;CL:0000451,5.59e-09,10;CL:0000763,1.02e-08,108;CL:0000049,1.02e-08,108;CL:0002194,1.28e-08,59;CL:0000576,1.28e-08,59;CL:0000040,1.28e-08,59;CL:0000559,1.28e-08,59;CL:0000624,2.31e-07,6;CL:0000839,2.38e-07,66;CL:0000990,5.35e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.61e-18;18!CL:0000051;2.18e-16;53!CL:0002057;3.09e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-20!115;UBERON:0002390!7.22e-17!102;UBERON:0003061!7.22e-17!102;UBERON:0002193!5.10e-14!112;UBERON:0001049!2.24e-10!57;UBERON:0005068!2.24e-10!57;UBERON:0006241!2.24e-10!57;UBERON:0007135!2.24e-10!57;UBERON:0001893!7.23e-10!34;UBERON:0002020!7.43e-10!34;UBERON:0003528!7.43e-10!34;UBERON:0002791!1.47e-09!33;UBERON:0003080!1.91e-09!42;UBERON:0002780!3.26e-09!41;UBERON:0001890!3.26e-09!41;UBERON:0006240!3.26e-09!41;UBERON:0001869!4.30e-09!32;UBERON:0000178!1.05e-08!15;UBERON:0000179!1.05e-08!15;UBERON:0000463!1.05e-08!15;UBERON:0002371!3.10e-08!80;UBERON:0002619!6.75e-08!22;UBERON:0001950!1.12e-07!20;UBERON:0002616!2.99e-07!59;UBERON:0001474!6.29e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.57e-11;15!UBERON:0000179;1.57e-11;15!UBERON:0000463;1.57e-11;15!UBERON:0001893;8.74e-09;34!UBERON:0003528;3.34e-08;34!UBERON:0002020;3.34e-08;34!UBERON:0002791;4.91e-08;32!UBERON:0001869;6.14e-08;32!UBERON:0002390;7.17e-08;32!UBERON:0002780;1.38e-07;41!UBERON:0001890;1.38e-07;41!UBERON:0001950;4.11e-07;20!UBERON:0002619;6.90e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.19e-18,98;UBERON:0003061,4.19e-18,98;UBERON:0007023,3.88e-16,114;UBERON:0002193,3.98e-16,108;UBERON:0000178,1.64e-11,15;UBERON:0000179,1.64e-11,15;UBERON:0000463,1.64e-11,15;UBERON:0001049,2.97e-11,56;UBERON:0005068,2.97e-11,56;UBERON:0006241,2.97e-11,56;UBERON:0007135,2.97e-11,56;UBERON:0002780,4.20e-10,41;UBERON:0001890,4.20e-10,41;UBERON:0003080,4.20e-10,41;UBERON:0006240,4.20e-10,41;UBERON:0001893,5.23e-10,34;UBERON:0003528,5.40e-10,34;UBERON:0002020,5.40e-10,34;UBERON:0000073,6.23e-10,53;UBERON:0002616,6.23e-10,53;UBERON:0002405,3.07e-09,93;UBERON:0002791,3.95e-09,32;UBERON:0001869,5.22e-09,32;UBERON:0002371,2.34e-07,76;UBERON:0001950,2.81e-07,20;UBERON:0000955,3.81e-07,68;UBERON:0006238,3.81e-07,68;UBERON:0004177,5.20e-07,7;UBERON:0005057,5.20e-07,7;UBERON:0001017,5.61e-07,81;UBERON:0002619,5.74e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.687720651731561,1.14940825229924,0.944529375764151,4.72037132218685,18.8076405067634,4.18003532953405,0,0.30120591877825,0,1.85921281392724,1.42169232487422,0.880801318004542,4.9859586767869,6.81851121398482,6.07630438004385,0.447830948479849,1.29557466407592,0.77272670290256,0.581592955118259,0.377875943688809,0.242584061187816,0.232429036905685,0.822335776043652,0,6.61692502340946,4.61089271752381,5.91205574721463,2.75796544589295,2.5819387343353,2.70852973188684,0.376484679085209,1.09162460023138,0.674170453335254,3.06083892370903,1.60464513538047,1.27867425159808,3.62836430205388,3.19141852194611,3.83602275479425,1.16083695451434,0.56738522469114,1.24564449799115,3.76872997885115,4.17186334736161,4.12658804939722,2.42159801053347,1.84138817993782,2.84816148696796,1.05627643155971,2.12604299965044,2.30624510059213,0.786300418025466,1.20141514273205,2.4108838004562,3.42015292489498,2.98375015798635,2.19196984517561,1.75996244461323,8.7382177801941,3.55803701545422,6.40095333849761,7.20712776664822,3.4485146397269,1.32208974556972,5.72432252721218,10.2458334439701,14.0936925449025,11.8504700718821,3.96513985737078,11.2101712596307,1.05353633910031,11.2124568964885,28.2967749179399,21.793758893948,3.34372990781356,5.21475626613745,6.15482147455153,7.79306913631645,6.68462741311041,8.54357131677028,7.3106185212595,10.8321545506006,6.40456598628376,7.02320476823343,7.07082989795807,7.18510046243206,8.69409257205158,4.30031033169975,4.0131124213457,1.04535523804977,7.59172596073693,16.0952607312807,14.4323527102705,23.5308313578138,10.1940932583711,5.20866763085135,5.70271226669025,6.92645547757755,9.08704939196371,14.9916871862815,11.8388626022008,13.1380479507367,26.6120901056647,39.8485891717426,19.1168213125295,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.263504357079378,0.851363990735132,0,0,2.59637914923747,2.78607579678828,1.59549552622638,15.9788718284579,16.5878524126237,26.0020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,7.75560528296651,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.09098448236334,1.43402297694502,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,10.5951143859516,0.122988438543114,0,0.439001141634502,0,0.502644862058154,0.370353780634118,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.936017060556951,0.594524649154913,1.87467667973554,1.84780341018745,1.55952606966625,0.358234090811393,0,0.383382679165211,3.4486426652716,0.704387472105808,0.829312462163088,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0.285826432630578,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,2.39935178836937,0,0,0,0,0,0,0,0,0.179060963239896,4.25923547175404,22.0674451426158,28.0315847317373,23.3584326029142,0.508189248444927,1.30139853857622,0,0,0,7.49007023947182,0,9.94597232246485,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,10.1316332800215,10.7857100409308,14.8351305346788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.40101294060657,0.644566922551274,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0.261435451024901,0,0,0.325378394664303,0.309123034943167,0.27470839445503,0.165018999841176,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,1.32227932288782,1.92190067365106,2.80747967488085,2.2254711788221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,1.08890984861323,0.564862804660675,0,0,0,0.689170200620878,3.55213326462519,3.0585488285695,5.69647187174163,2.1440859791201,5.34770955012053,2.59389324477087,3.24018862342869,1.58625035258854,0,0,1.71528151186722,1.30062222588003,0.721346064882224,8.18131198506762,1.91311527274587,0.997896857164083,1.7235483311913,3.81012448902989,0.973865820823666,0.280797178113459,2.05411211129873,0.626719583092093,2.50634477090067,1.35433422241283,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0.33307196799782,0,0.935702702041099,0.439524537815682,0,0,0.284136146806413,2.3874448473769,0.593929361665277,0.307160702099232,0.994147647766298,2.53204949538923,0,0.988823245360557,0,0.19924798825107,5.8019622261541,0.755798243562828,0.511343412510774,1.47701766553283,0,1.3480252672099,0.537063524026827,0,0.789147245095469,11.974154617347,0,2.90799823828566,2.87581104301739,1.99613798001194,0.520855522170466,0.349839999984783,1.44999915086959,0,0.254253650292766,0.709163045303809,0,0,0.173624994933292,5.31444831488303,1.92954301800653,0,0.663475559587348,0.886642856860642,4.8264787373874,0.10893846351899,0.975966209950223,1.46205491157214,0,0,0.0897576444097721,0,1.5950057986596,0.641183153813036,0.533034776018635,8.17546385565892,0.470940769185074,0.332423363800313,0,0,0,0,0.158936578980379,0,0.979396848954886,0.424059214301822,0.216388639742091,2.98578579323551,1.76915129006678,1.22206028986725,4.15129580152871,2.10058696209055,1.98401704060365,2.6286441862464,0,1.40558667435203,1.45963831372533,2.34797542718508,0,0.394584402849391,1.20990716048664,0.61214552326098,0.63186579628488,0.901940516486955,0.414752765588989,0,0,0,0,0,0,0.173559738335131,0.979923974143776,1.13176968554523,1.57254001417827,0,0.290268993867255,0.438535902517113,0.246346371159628,1.64881328030313,0,0.451961481561065,0,0,3.16553979779394,0.586654148204409,0.561111741760736,0.640358984218058,0,0.144090417154106,0,0.343189995723929,0.576219191952599,0.124252535565433,0.471388069233591,0.135904206073614,0,0,0,4.20294202096853,4.10716136675979,2.55493176133945,0.429765441419957,0.262887354279314,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0.157566364614447,0,0.13480708770837,0.393709926058995,0.76205998859206,0.795229689809303,1.0896272488926,0,0,0.415440338029185,5.39937339723601,3.86900977278975,1.88323625639876,0,0.86686278029118,0.314727528809989,0,0,1.15149118391667,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.113312091520126,0.439656701034247,0,2.19781025814636,2.24795422962573,0,0.704815022316672,2.0289608387862,0.78602152549833,3.31391244277756,1.9846640872478,1.18566979138767,2.67943716437971,0,0,0.2506898940227,0,0,0.157054096250234,0.886068179966986,3.78281421196086,3.004582336956,2.29363678276028,1.22021956690538,1.30402446176905,0.138348634936231,0.249960815924213,0.151649117541648,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.761610424337591,0,0,1.07410557042488,0,0,0,0,0,0,0,1.50109113962448,0.782982875895635,0.226705925512272,0.231522474323834,0.244736704506468,0,0,0.657852148736121,0,1.3503982678964,0.844712203265363,0.512483037175893,0,0.607719912354764,4.83904526531058,2.92290463259083,2.79016164658062,2.61704630809351,0,0,1.47918486351039,2.99981093782395,0.533458648470704,1.72214979660816,0,0,0.279759015438889,1.24415452006595,0.127894371303652,0,0.314531883711793,0,0,0,0,0,0,2.91788456504637,0,0,0,2.89031512934068,5.6678630530234,3.83121261737163,4.1023272848151,0.252071696221718,1.38314504928436,4.84426936895553,2.85538840518309,0.785181748008205,0.11796972334774,0.550285795565037,0.115525666150338,0,0,0,0.150420656698515,0,0.781514011233092,0,0.163771917510097,5.91424344868181,2.02612753855184,1.56215619722769,3.30698874401895,1.77564268542939,2.18789923607288,0,0,0,1.02209942111676,0,0,0,1.36597314810779,0.709618961301111,4.26365753956383,0,3.87427477967941,1.57854656550838,0.472775363535873,0.222462803784138,0.627944742804112,2.35673384874003,0.280272163313789,0,1.07963795609311,0,0.357382720883282,0,0,0,0,0.207216164163037,0.17071847709395,2.07377898544228,0.430227358820278,0,0,0.423387050190929,1.14553434272025,0,0,1.23040974977572,0.392600934460972,0.731507549893617,0,0.102662806856247,0,0.971421986118279,0.467878926924211,0.795803100645473,0.118920090777569,0.22589216407792,0,0.603851374266694,2.31522474323834,1.09279780251979,1.41095188908457,0.245148321753905,0.707029641304878,2.74831853960923,3.26751040359795,2.113278637917,0,4.32326022707326,2.96506284678455,1.79894080664872,0.535661815816973,1.05868461514708,0.802413666891683,0.730336388246517,0.917458566809082,3.15347082933193,0.631086248772738,1.90376172534561,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0.803892390468535,1.65833887891756,4.13731983447581,3.19850972851471,3.33290204049236,24.1562522786663,24.8298857183432,0,1.52753179867596,0.808468755832877,2.17716747896961,0.684466602170562,4.10847523388984,1.57788851863888,0.332660356546013,2.19788825249631,0,0,0.269475606319761,0,0.488965776731466,0.813792356631477,2.66302709674205,5.03184483977566,1.60284246151616 | |||
|short_description=p3@ARAP2 | |||
}} |
Revision as of 00:38, 22 January 2014
Short description: | p3@ARAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARAP2_5end |
Coexpression cluster: | C1522_CD8_Natural_CD4_Basophils_thymus_Peripheral_CD19 |
Association with transcript: | -6bp_to_NM_015230, uc003gsq.1_5end |
EntrezGene: | ARAP2 |
HGNC: | 16924 |
UniProt: | A7E2A5Q8WZ64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.19e-18 | 98 |
blood island | 4.19e-18 | 98 |
adult organism | 3.88e-16 | 114 |
hemolymphoid system | 3.98e-16 | 108 |
blood | 1.64e-11 | 15 |
haemolymphatic fluid | 1.64e-11 | 15 |
organism substance | 1.64e-11 | 15 |
neural tube | 2.97e-11 | 56 |
neural rod | 2.97e-11 | 56 |
future spinal cord | 2.97e-11 | 56 |
neural keel | 2.97e-11 | 56 |
regional part of forebrain | 4.20e-10 | 41 |
forebrain | 4.20e-10 | 41 |
anterior neural tube | 4.20e-10 | 41 |
future forebrain | 4.20e-10 | 41 |
telencephalon | 5.23e-10 | 34 |
brain grey matter | 5.40e-10 | 34 |
gray matter | 5.40e-10 | 34 |
regional part of nervous system | 6.23e-10 | 53 |
regional part of brain | 6.23e-10 | 53 |
immune system | 3.07e-09 | 93 |
regional part of telencephalon | 3.95e-09 | 32 |
cerebral hemisphere | 5.22e-09 | 32 |
bone marrow | 2.34e-07 | 76 |
neocortex | 2.81e-07 | 20 |
brain | 3.81e-07 | 68 |
future brain | 3.81e-07 | 68 |
hemopoietic organ | 5.20e-07 | 7 |
immune organ | 5.20e-07 | 7 |
central nervous system | 5.61e-07 | 81 |
regional part of cerebral cortex | 5.74e-07 | 22 |