FFCP PHASE1:Hg19::chr12:6341836..6341857,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6341836..6341857,+ | |||
|description=CAGE_peak_at_chr12:6341836..6341857,+ | |description=CAGE_peak_at_chr12:6341836..6341857,+ | ||
|id=chr12:6341836..6341857,+ | |id=chr12:6341836..6341857,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.40e-14!254;CL:0002321!9.95e-09!248;CL:0000220!2.27e-08!246;CL:0002078!7.14e-08!44;CL:0000115!7.72e-07!35 | |ontology_enrichment_celltype=CL:0000066!1.40e-14!254;CL:0002321!9.95e-09!248;CL:0000220!2.27e-08!246;CL:0002078!7.14e-08!44;CL:0000115!7.72e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002188;3.24e-15;5!CL:0000115;2.42e-12;36!CL:0002681;2.27e-11;12!CL:0002584;2.27e-11;12!CL:1000746;9.16e-11;7!CL:1000612;9.16e-11;7!CL:1000449;6.99e-09;15!CL:1000497;1.03e-07;17!CL:0002518;1.03e-07;17!CL:0002078;1.16e-07;45!CL:0000575;4.28e-07;2!CL:0002139;9.40e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.64e-15,5;CL:0002078,4.65e-13,45;CL:0000115,4.95e-13,36;CL:0002681,2.17e-11,12;CL:0002584,2.17e-11,12;CL:1000746,9.92e-11,7;CL:1000612,9.92e-11,7;CL:1000449,6.73e-09,15;CL:0000213,4.62e-08,58;CL:0000215,4.62e-08,58;CL:1000497,9.98e-08,17;CL:0002518,9.98e-08,17;CL:0000575,2.23e-07,2;CL:0000222,3.30e-07,121 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.70e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;7.47e-11;3!DOID:127;7.47e-11;3!DOID:0060072;3.23e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.25e-11,3;DOID:127,7.25e-11,3;DOID:0060072,3.16e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000467!2.24e-11!625;UBERON:0000480!3.29e-11!626;UBERON:0000468!1.03e-10!659;UBERON:0000922!1.46e-10!612;UBERON:0000477!1.52e-09!286;UBERON:0002050!4.05e-09!605;UBERON:0005423!4.05e-09!605;UBERON:0000923!6.41e-09!604;UBERON:0005291!6.41e-09!604;UBERON:0006598!6.41e-09!604;UBERON:0002532!6.41e-09!604;UBERON:0004111!4.62e-08!241;UBERON:0005156!5.01e-08!59;UBERON:0000990!5.01e-08!59;UBERON:0004876!5.34e-08!20;UBERON:0003064!1.33e-07!37;UBERON:0000464!3.28e-07!104;UBERON:0000080!7.82e-07!18;UBERON:0002120!7.82e-07!18;UBERON:0004875!7.82e-07!18;UBERON:0005721!7.82e-07!18;UBERON:0005754!7.82e-07!18;UBERON:0007297!7.82e-07!18;UBERON:0000058!8.12e-07!26 | |ontology_enrichment_uberon=UBERON:0000467!2.24e-11!625;UBERON:0000480!3.29e-11!626;UBERON:0000468!1.03e-10!659;UBERON:0000922!1.46e-10!612;UBERON:0000477!1.52e-09!286;UBERON:0002050!4.05e-09!605;UBERON:0005423!4.05e-09!605;UBERON:0000923!6.41e-09!604;UBERON:0005291!6.41e-09!604;UBERON:0006598!6.41e-09!604;UBERON:0002532!6.41e-09!604;UBERON:0004111!4.62e-08!241;UBERON:0005156!5.01e-08!59;UBERON:0000990!5.01e-08!59;UBERON:0004876!5.34e-08!20;UBERON:0003064!1.33e-07!37;UBERON:0000464!3.28e-07!104;UBERON:0000080!7.82e-07!18;UBERON:0002120!7.82e-07!18;UBERON:0004875!7.82e-07!18;UBERON:0005721!7.82e-07!18;UBERON:0005754!7.82e-07!18;UBERON:0007297!7.82e-07!18;UBERON:0000058!8.12e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0000353;1.74e-11;15!UBERON:0001225;2.27e-11;12!UBERON:0008987;2.27e-11;12!UBERON:0000074;9.16e-11;7!UBERON:0001229;9.16e-11;7!UBERON:0000473;1.91e-09;8!UBERON:0001851;6.99e-09;15!UBERON:0006555;6.99e-09;15!UBERON:0004819;6.99e-09;15!UBERON:0001285;6.99e-09;15!UBERON:0007684;6.99e-09;15!UBERON:0001044;6.76e-08;6!UBERON:0003293;6.76e-08;6!UBERON:0003294;6.76e-08;6!UBERON:0010047;6.76e-08;6!UBERON:0003408;6.76e-08;6!UBERON:0000167;6.76e-08;6!UBERON:0000487;2.24e-07;22!UBERON:0003135;9.23e-07;11!UBERON:0001829;9.74e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004876,7.14e-13,11;UBERON:0000080,7.55e-12,9;UBERON:0002120,7.55e-12,9;UBERON:0004875,7.55e-12,9;UBERON:0005721,7.55e-12,9;UBERON:0005754,7.55e-12,9;UBERON:0007297,7.55e-12,9;UBERON:0000353,1.58e-11,15;UBERON:0001225,2.17e-11,12;UBERON:0008987,2.17e-11,12;UBERON:0000058,2.56e-11,19;UBERON:0010532,9.92e-11,7;UBERON:0000074,9.92e-11,7;UBERON:0001229,9.92e-11,7;UBERON:0001230,9.92e-11,7;UBERON:0003220,9.92e-11,7;UBERON:0005749,9.92e-11,7;UBERON:0004199,9.92e-11,7;UBERON:0004209,9.92e-11,7;UBERON:0004198,9.92e-11,7;UBERON:0000473,1.85e-09,8;UBERON:0005103,2.43e-09,8;UBERON:0000083,2.43e-09,8;UBERON:0009201,2.43e-09,8;UBERON:0006553,2.43e-09,8;UBERON:0003074,2.43e-09,8;UBERON:0003060,2.43e-09,8;UBERON:0001851,6.73e-09,15;UBERON:0004211,6.73e-09,15;UBERON:0009773,6.73e-09,15;UBERON:0001231,6.73e-09,15;UBERON:0001285,6.73e-09,15;UBERON:0007684,6.73e-09,15;UBERON:0004208,6.73e-09,15;UBERON:0003887,1.07e-08,12;UBERON:0006555,2.82e-08,16;UBERON:0004819,2.82e-08,16;UBERON:0001044,6.22e-08,6;UBERON:0003293,6.22e-08,6;UBERON:0003294,6.22e-08,6;UBERON:0010047,6.22e-08,6;UBERON:0000167,6.22e-08,6;UBERON:0003914,1.50e-07,117;UBERON:0002553,1.79e-07,61;UBERON:0000487,2.07e-07,22;UBERON:0000055,2.75e-07,68;UBERON:0001829,8.00e-07,2;UBERON:0004111,8.31e-07,240;UBERON:0003135,9.03e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.491467873003018,1.39560233594486,0.218441372130172,0.527533956456907,0.495065411840187,1.32558950291166,0.672325146451775,0,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0.286235987131057,0.547497700291537,0.251085279189606,0.152826811495903,0,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0.564727018627814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0.973269740605272,0,0.443458794925128,0.175669571386252,0.196468613246569,1.82147644146271,2.59549109949101,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0.56530794192401,0.419499436209906,1.92582629358047,1.25396979922086,0,0.71153252537342,0.33472061276467,0,0,2.4406205754817,0,4.0507097394088,0.803697554556718,0.22452937262617,0.337834441449967,0,0,1.46561395144326,0,0,0.872188104285069,0,0.25326102332916,0.132409180813219,0.286836620748814,0,1.68203280042692,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,0,0.597794722207204,0,0.161872944368132,0,0.204154171254893,0.737005903870608,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,1.00094815897571,0,0.438977620880838,0,0.150238058906597,0.340296549480063,0,0,0.211931901159562,0,0.309157587715317,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0.57978255948989,0.272746120590835,0.286804595389004,0.487894824518382,0.397589304964456,0.232387885739037,0.621966330092223,0.252320850875628,0,0,0,0,0.464367928031979,0,0.354920400119532,0.505754070234305,0.241011029883482,0.772057809126758,0.435758888184812,0,0.404493924480493,0.392442930250692,0.38474715694639,0.738155454624648,1.40241773803446,0,0,0,0.982827216677626,0.590789906681404,0,0.491953754172454,0.171567810298526,0.658501712451753,0,1.3068766413512,0.462942225792648,0.325808305310325,0,0,0.231860809950154,0.117408694235822,1.15493158208859,0.462985512576611,2.28304982681518,0,0,0,0,0.743155811443641,0,0.503946384596579,0.425325291727159,0.0895585227028483,0,0.766765358330422,1.47798971368783,0.176096868026452,0,0.288239906833923,0.37872730027914,0.380987365753014,0,0,0,0.925447434329912,0.901029173531752,0.285826432630578,0.112131084345361,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.199945982364114,3.64871341923571,0.502257091432126,4.21667878966063,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,1.00034104211935,0,0.415941723061614,1.60586089917446,0.630809660135739,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0,0.355123450626254,0.0821271560138091,0.519254429183621,0.116210378459959,0.604297247958111,0.601519410909855,0.368323955743585,0,0.728364672026868,0.655622074797121,0.451199612907412,0.539107359730903,0.784349769176855,0,0.422206515571503,4.54933536283586,3.06168669497728,1.0795795805107,1.54227252690289,0,0.501689773854853,1.27438136522519,0.831076008928724,1.56712328305525,0,0,0,0.328014645699706,0,0.206082023295445,0,0,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0,0.495854746082934,0.576570202095319,0.127612712494584,0.4046311234222,0,1.25924938732256,0,21.8703841925023,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0.487426979262569,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0,0,2.19225442626881,0,1.9676842561399,0.202910376962704,0.6196469961995,0.845086807596724,0,0.0982490410131212,0,0.354761064070598,0.844430541190656,0,0,0.349934720244983,0.192444225451024,0,0,0.282431402330337,0.86101074534246,0,0.886860307073351,0.459446800413919,1.01489521846434,1.52927441428475,0.569647187174163,0.238231775457789,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.28853842595289,0,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.121360521749513,0,0.568272293612826,0.71623345421307,0.296964680832639,0.921482106297696,0,0,0.111308705022906,0,0,1.59398390600856,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.682760689712998,1.27126825146383,0.709163045303809,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0.41827123283581,0.307801034015188,0,0,0,0.760531603454056,0.957003479195758,0.274792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,0.979396848954886,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.337005664903385,0,0.234264445725339,0.547364367646998,0.978323094660449,0.2427803795340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| ||
|short_description=p@chr12:6341836..6341857,+ | |short_description=p@chr12:6341836..6341857,+ | ||
}} | }} |
Latest revision as of 11:11, 24 July 2015
Short description: | p@chr12:6341836..6341857, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6341836..6341857, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.64e-15 | 5 |
meso-epithelial cell | 4.65e-13 | 45 |
endothelial cell | 4.95e-13 | 36 |
kidney cortical cell | 2.17e-11 | 12 |
renal cortical epithelial cell | 2.17e-11 | 12 |
glomerular cell | 9.92e-11 | 7 |
kidney corpuscule cell | 9.92e-11 | 7 |
epithelial cell of nephron | 6.73e-09 | 15 |
lining cell | 4.62e-08 | 58 |
barrier cell | 4.62e-08 | 58 |
kidney cell | 9.98e-08 | 17 |
kidney epithelial cell | 9.98e-08 | 17 |
corneal epithelial cell | 2.23e-07 | 2 |
mesodermal cell | 3.30e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.25e-11 | 3 |
leiomyoma | 7.25e-11 | 3 |
benign neoplasm | 3.16e-08 | 4 |