FFCP PHASE1:Hg19::chr13:112711028..112711039,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-157bp_to_AK091058,AX746756_5end | |association_with_transcript=-157bp_to_AK091058,AX746756_5end | ||
|cluster_id=chr13:112711028..112711039,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_AK091058_5end,CAGE_peak_4_at_AX746756_5end | |description=CAGE_peak_4_at_AK091058_5end,CAGE_peak_4_at_AX746756_5end | ||
|id=chr13:112711028..112711039,+ | |id=chr13:112711028..112711039,+ | ||
|ontology_enrichment_celltype=CL:0000047!6.54e-10!8;CL:0000540!5.04e-08!6;CL:0000031!5.04e-08!6;CL:0000404!5.04e-08!6 | |ontology_enrichment_celltype=CL:0000047!6.54e-10!8;CL:0000540!5.04e-08!6;CL:0000031!5.04e-08!6;CL:0000404!5.04e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.86e-20;6!CL:0000404;1.86e-20;6!CL:0002319;4.20e-08;25!CL:0000123;6.80e-08;2!CL:0000242;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.27e-20,6;CL:0000031,2.27e-20,6;CL:0000404,2.27e-20,6;CL:0000047,1.90e-15,8;CL:0002319,4.16e-08,25;CL:0000242,5.37e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.86e-20;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.95e-70!41;UBERON:0001890!2.95e-70!41;UBERON:0006240!2.95e-70!41;UBERON:0003080!1.75e-68!42;UBERON:0001893!8.02e-67!34;UBERON:0001869!3.92e-65!32;UBERON:0002791!9.59e-63!33;UBERON:0001017!3.24e-58!82;UBERON:0002619!1.33e-56!22;UBERON:0002020!2.26e-55!34;UBERON:0003528!2.26e-55!34;UBERON:0005743!3.05e-55!86;UBERON:0001049!3.65e-53!57;UBERON:0005068!3.65e-53!57;UBERON:0006241!3.65e-53!57;UBERON:0007135!3.65e-53!57;UBERON:0002616!3.47e-51!59;UBERON:0000956!1.30e-49!25;UBERON:0000203!1.30e-49!25;UBERON:0000955!1.54e-49!69;UBERON:0006238!1.54e-49!69;UBERON:0000073!1.91e-49!94;UBERON:0001016!1.91e-49!94;UBERON:0001950!2.61e-48!20;UBERON:0003056!1.17e-45!61;UBERON:0002346!4.24e-37!90;UBERON:0003075!3.08e-36!86;UBERON:0007284!3.08e-36!86;UBERON:0000033!1.52e-29!123;UBERON:0000924!1.91e-29!173;UBERON:0006601!1.91e-29!173;UBERON:0004121!2.04e-28!169;UBERON:0000153!7.09e-28!129;UBERON:0007811!7.09e-28!129;UBERON:0007023!1.44e-25!115;UBERON:0001872!3.39e-24!5;UBERON:0000369!5.88e-19!4;UBERON:0002435!5.88e-19!4;UBERON:0000204!5.88e-19!4;UBERON:0010082!5.88e-19!4;UBERON:0002021!1.05e-15!5;UBERON:0005383!1.11e-14!3;UBERON:0005382!1.11e-14!3;UBERON:0000200!7.07e-13!6;UBERON:0000025!1.66e-11!194;UBERON:0009663!6.82e-11!7;UBERON:0001954!1.42e-10!2;UBERON:0003022!1.42e-10!2;UBERON:0002421!1.42e-10!2;UBERON:0002600!1.42e-10!2;UBERON:0001873!1.98e-10!2;UBERON:0010122!1.98e-10!2;UBERON:0001871!7.52e-10!7;UBERON:0000349!4.15e-09!5;UBERON:0004111!5.55e-09!241;UBERON:0002308!1.72e-08!9;UBERON:0002420!1.72e-08!9;UBERON:0000125!1.72e-08!9;UBERON:0007245!1.72e-08!9;UBERON:0010009!1.72e-08!9;UBERON:0010011!1.72e-08!9;UBERON:0000454!1.72e-08!9;UBERON:0000477!2.22e-07!286;UBERON:0002771!4.62e-07!3;UBERON:0000064!5.70e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.63e-28;22!UBERON:0000956;1.55e-24;25!UBERON:0000203;1.55e-24;25!UBERON:0001950;1.37e-22;20!UBERON:0001869;5.48e-22;32!UBERON:0001893;1.32e-19;34!UBERON:0002791;1.55e-17;32!UBERON:0003528;3.71e-16;34!UBERON:0002020;3.71e-16;34!UBERON:0002780;2.10e-15;41!UBERON:0001890;2.10e-15;41!UBERON:0002022;1.72e-14;1!UBERON:0007190;1.72e-14;1!UBERON:0002021;1.24e-11;5!UBERON:0000073;5.03e-10;53!UBERON:0002616;5.03e-10;53!UBERON:0000955;5.61e-09;68!UBERON:0001871;1.34e-08;6!UBERON:0001017;1.67e-08;75!UBERON:0001016;2.53e-08;83!UBERON:0002360;6.80e-08;2!UBERON:0001954;6.80e-08;2!UBERON:0000094;6.80e-08;2!UBERON:0003022;6.80e-08;2!UBERON:0002421;6.80e-08;2!UBERON:0002600;6.80e-08;2!UBERON:0010743;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.30e-28,22;UBERON:0001017,1.83e-25,81;UBERON:0001869,5.52e-25,32;UBERON:0000956,1.49e-24,25;UBERON:0000203,1.49e-24,25;UBERON:0001893,1.61e-23,34;UBERON:0001016,7.69e-23,89;UBERON:0001950,1.46e-22,20;UBERON:0002780,1.72e-19,41;UBERON:0001890,1.72e-19,41;UBERON:0003080,1.72e-19,41;UBERON:0006240,1.72e-19,41;UBERON:0002791,2.98e-19,32;UBERON:0003528,3.99e-18,34;UBERON:0002020,3.99e-18,34;UBERON:0000073,5.28e-15,53;UBERON:0002616,5.28e-15,53;UBERON:0000955,1.91e-14,68;UBERON:0006238,1.91e-14,68;UBERON:0007190,2.11e-14,1;UBERON:0002022,2.75e-14,1;UBERON:0001049,3.56e-14,56;UBERON:0005068,3.56e-14,56;UBERON:0006241,3.56e-14,56;UBERON:0007135,3.56e-14,56;UBERON:0004121,2.10e-13,171;UBERON:0000924,2.10e-13,171;UBERON:0006601,2.10e-13,171;UBERON:0003056,5.68e-13,61;UBERON:0002021,1.21e-11,5;UBERON:0011216,6.49e-10,223;UBERON:0003075,1.71e-09,82;UBERON:0007284,1.71e-09,82;UBERON:0010371,2.66e-09,104;UBERON:0002346,5.08e-09,86;UBERON:0001871,1.27e-08,6;UBERON:0001954,5.74e-08,2;UBERON:0003022,5.74e-08,2;UBERON:0002421,5.74e-08,2;UBERON:0002600,5.74e-08,2;UBERON:0002360,9.19e-08,2;UBERON:0000094,9.19e-08,2;UBERON:0010743,9.19e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,2.31986643833309,1.34013012267479,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,7.34574627913176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,1.15424157650247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0,0,0,0,0,0,0,0,0,0,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0,0.41023272848151,3.52900374710405,0.553258019713743,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2832141077495,0.781078098613847,0.620060389503552,0.951237152908602,11.4864709893826,0,0,0.351742488719241,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.986591603442736,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,1.42782129400921,5.67255897442491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,2.31986643833309,1.34013012267479,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649376687132959,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,7.34574627913176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696418755514666,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,1.15424157650247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0,0,0,0,0,0,0,0,0,0,1.7390523433299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,1.41696576325585,0,0.41023272848151,3.52900374710405,0.553258019713743,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2832141077495,0.781078098613847,0.620060389503552,0.951237152908602,11.4864709893826,0,0,0.351742488719241,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.986591603442736,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,1.42782129400921,5.67255897442491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@AK091058,p4@AX746756 | |short_description=p4@AK091058,p4@AX746756 | ||
}} | }} |
Latest revision as of 14:39, 24 July 2015
Short description: | p4@AK091058, p4@AX746756 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AK091058_5end, CAGE_peak_4_at_AX746756_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -157bp_to_AK091058, AX746756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.27e-20 | 6 |
neuroblast | 2.27e-20 | 6 |
electrically signaling cell | 2.27e-20 | 6 |
neuronal stem cell | 1.90e-15 | 8 |
neural cell | 4.16e-08 | 25 |
Merkel cell | 5.37e-08 | 2 |