FFCP PHASE1:Hg19::chr14:87636652..87636657,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:87636652..87636657,- to FFCP PHASE1:Hg19::chr14:87636652..87636657,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:87636652..87636657,- | |||
|coexpression_cluster_id=C789 | |||
|description=CAGE_peak_at_chr14:87636652..87636657,- | |||
|id=chr14:87636652..87636657,- | |||
|ontology_enrichment_celltype=CL:0002586!1.49e-11!3;CL:0000064!5.03e-11!3;CL:0005012!5.03e-11!3;CL:0000067!5.03e-11!3;CL:0002304!5.03e-11!3;CL:0000149!9.52e-09!4;CL:0000147!3.24e-08!14;CL:0002549!3.98e-08!2;CL:0000325!9.68e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.04e-54;3!CL:0000149;2.90e-41;4!CL:0002549;1.42e-36;2!CL:0000147;4.15e-21;14!CL:0000342;1.30e-19;1!CL:0002565;1.30e-19;1!CL:0000306;7.41e-19;4!CL:0002222;7.41e-19;4!CL:0002224;7.41e-19;4!CL:0000064;2.79e-07;3!CL:0000067;2.79e-07;3!CL:0005012;2.79e-07;3!CL:0002304;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.24e-55,3;CL:0000149,2.20e-41,4;CL:0002549,1.70e-36,2;CL:0000147,3.74e-21,14;CL:0000342,1.30e-19,1;CL:0002565,1.30e-19,1;CL:0000306,8.88e-19,4;CL:0002222,8.88e-19,4;CL:0002224,8.88e-19,4;CL:0000064,2.32e-07,3;CL:0000067,2.32e-07,3;CL:0005012,2.32e-07,3;CL:0002304,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.82e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.51e-79,11;UBERON:0000019,3.68e-57,20;UBERON:0000047,3.68e-57,20;UBERON:0010312,3.68e-57,20;UBERON:0004088,3.68e-57,20;UBERON:0010230,3.68e-57,20;UBERON:0003072,3.68e-57,20;UBERON:0004128,3.68e-57,20;UBERON:0003071,3.68e-57,20;UBERON:0001782,7.24e-55,3;UBERON:0005424,7.24e-55,3;UBERON:0000970,1.97e-54,21;UBERON:0002104,1.97e-54,21;UBERON:0001456,5.95e-52,22;UBERON:0000966,9.58e-49,6;UBERON:0005388,9.58e-49,6;UBERON:0001802,9.58e-49,6;UBERON:0000020,1.31e-47,24;UBERON:0001032,1.31e-47,24;UBERON:0004456,1.31e-47,24;UBERON:0001781,2.20e-41,4;UBERON:0005085,8.16e-37,31;UBERON:0005629,1.70e-36,2;UBERON:0005358,1.70e-36,2;UBERON:0001886,1.70e-36,2;UBERON:0004086,1.70e-36,2;UBERON:0005282,1.70e-36,2;UBERON:0005281,1.70e-36,2;UBERON:0006876,1.68e-26,11;UBERON:0001444,3.46e-23,49;UBERON:0001801,6.62e-21,14;UBERON:0000033,3.02e-20,56;UBERON:0002506,1.30e-19,1;UBERON:0001769,1.30e-19,1;UBERON:0000488,3.57e-19,4;UBERON:0010077,8.88e-19,4;UBERON:0005389,8.88e-19,4;UBERON:0000484,8.88e-19,4;UBERON:0002546,8.88e-19,4;UBERON:0000965,8.88e-19,4;UBERON:0001803,8.88e-19,4;UBERON:0003073,8.88e-19,4;UBERON:0005426,8.88e-19,4;UBERON:0000153,2.99e-18,62;UBERON:0007811,2.99e-18,62;UBERON:0003056,2.99e-18,61;UBERON:0005284,2.90e-15,5;UBERON:0003075,1.58e-13,82;UBERON:0007284,1.58e-13,82;UBERON:0002203,4.01e-13,6;UBERON:0001768,4.01e-13,6;UBERON:0002200,4.01e-13,6;UBERON:0002346,6.96e-13,86;UBERON:0010371,1.36e-10,104;UBERON:0000076,6.94e-10,8;UBERON:0004121,9.69e-10,171;UBERON:0000924,9.69e-10,171;UBERON:0006601,9.69e-10,171;UBERON:0010314,3.01e-08,132;UBERON:0001778,2.32e-07,3;UBERON:0001775,2.32e-07,3;UBERON:0001048,9.36e-07,160 | |||
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| ||
|short_description=p@chr14:87636652..87636657,- | |||
}} | }} |
Latest revision as of 23:20, 24 July 2015
Short description: | p@chr14:87636652..87636657, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:87636652..87636657, - |
Coexpression cluster: | C789_retina_Retinal_medulla_stomach_lung_eye_corpus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.24e-55 | 3 |
visual pigment cell | 2.20e-41 | 4 |
fibroblast of choroid plexus | 1.70e-36 | 2 |
pigment cell | 3.74e-21 | 14 |
pigment cell (sensu Vertebrata) | 1.30e-19 | 1 |
iris pigment epithelial cell | 1.30e-19 | 1 |
crystallin accumulating cell | 8.88e-19 | 4 |
vertebrate lens cell | 8.88e-19 | 4 |
lens epithelial cell | 8.88e-19 | 4 |
ciliated cell | 2.32e-07 | 3 |
ciliated epithelial cell | 2.32e-07 | 3 |
multi-ciliated epithelial cell | 2.32e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.32e-07 | 3 |