FFCP PHASE1:Hg19::chr17:76483088..76483092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:76483088..76483092,+ | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_at_chr17:76483088..76483092,+ | |description=CAGE_peak_at_chr17:76483088..76483092,+ | ||
|id=chr17:76483088..76483092,+ | |id=chr17:76483088..76483092,+ | ||
|ontology_enrichment_celltype=CL:0002150!3.19e-07!3;CL:0000861!3.19e-07!3 | |ontology_enrichment_celltype=CL:0002150!3.19e-07!3;CL:0000861!3.19e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000946;4.72e-15;1!CL:0000786;4.72e-15;1!CL:0002363;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.73e-15,1;CL:0000786,4.73e-15,1;CL:0000980,4.73e-15,1;CL:0000785,3.56e-08,2;CL:0000955,3.56e-08,2;CL:0000818,3.56e-08,2;CL:0000954,3.56e-08,2;CL:0000816,3.56e-08,2;CL:0002363,8.04e-08,2;CL:0000008,8.04e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.21e-15;1!UBERON:0008947;2.25e-11;29!CL:0000954;3.56e-08;2!CL:0000008;7.03e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2355;8.74e-15;1!DOID:630;1.84e-14;1!DOID:0050177;1.84e-14;1!DOID:0050427;1.84e-14;1!DOID:3908;1.15e-11;5!DOID:74;4.85e-08;2!DOID:3910;7.03e-08;2!DOID:3905;7.20e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,8.17e-15,1;DOID:630,1.84e-14,1;DOID:0050177,1.84e-14,1;DOID:0050427,1.84e-14,1;DOID:3908,1.42e-11,5;DOID:74,4.69e-08,2;DOID:3910,9.19e-08,2;DOID:3905,8.10e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.04e-18!9;UBERON:0001049!5.96e-16!57;UBERON:0005068!5.96e-16!57;UBERON:0006241!5.96e-16!57;UBERON:0007135!5.96e-16!57;UBERON:0001017!7.47e-14!82;UBERON:0000073!6.33e-13!94;UBERON:0001016!6.33e-13!94;UBERON:0005743!8.03e-13!86;UBERON:0002616!1.69e-12!59;UBERON:0000955!1.39e-11!69;UBERON:0006238!1.39e-11!69;UBERON:0002780!6.44e-11!41;UBERON:0001890!6.44e-11!41;UBERON:0006240!6.44e-11!41;UBERON:0003080!1.51e-10!42;UBERON:0002346!3.12e-10!90;UBERON:0002020!1.59e-09!34;UBERON:0003528!1.59e-09!34;UBERON:0001893!2.67e-09!34;UBERON:0003075!3.74e-09!86;UBERON:0007284!3.74e-09!86;UBERON:0002791!1.66e-08!33;UBERON:0002298!1.87e-08!8;UBERON:0002308!1.29e-07!9;UBERON:0000125!1.29e-07!9;UBERON:0001557!2.18e-07!19;UBERON:0000924!2.63e-07!173;UBERON:0006601!2.63e-07!173;UBERON:0001869!2.89e-07!32;UBERON:0008947!3.14e-07!38;UBERON:0003258!3.14e-07!38;UBERON:0007023!3.93e-07!115;UBERON:0006331!5.67e-07!3;UBERON:0003076!5.94e-07!15;UBERON:0003057!5.94e-07!15;UBERON:0003056!8.50e-07!61;UBERON:0000064!9.28e-07!219 | |ontology_enrichment_uberon=UBERON:0001737!5.04e-18!9;UBERON:0001049!5.96e-16!57;UBERON:0005068!5.96e-16!57;UBERON:0006241!5.96e-16!57;UBERON:0007135!5.96e-16!57;UBERON:0001017!7.47e-14!82;UBERON:0000073!6.33e-13!94;UBERON:0001016!6.33e-13!94;UBERON:0005743!8.03e-13!86;UBERON:0002616!1.69e-12!59;UBERON:0000955!1.39e-11!69;UBERON:0006238!1.39e-11!69;UBERON:0002780!6.44e-11!41;UBERON:0001890!6.44e-11!41;UBERON:0006240!6.44e-11!41;UBERON:0003080!1.51e-10!42;UBERON:0002346!3.12e-10!90;UBERON:0002020!1.59e-09!34;UBERON:0003528!1.59e-09!34;UBERON:0001893!2.67e-09!34;UBERON:0003075!3.74e-09!86;UBERON:0007284!3.74e-09!86;UBERON:0002791!1.66e-08!33;UBERON:0002298!1.87e-08!8;UBERON:0002308!1.29e-07!9;UBERON:0000125!1.29e-07!9;UBERON:0001557!2.18e-07!19;UBERON:0000924!2.63e-07!173;UBERON:0006601!2.63e-07!173;UBERON:0001869!2.89e-07!32;UBERON:0008947!3.14e-07!38;UBERON:0003258!3.14e-07!38;UBERON:0007023!3.93e-07!115;UBERON:0006331!5.67e-07!3;UBERON:0003076!5.94e-07!15;UBERON:0003057!5.94e-07!15;UBERON:0003056!8.50e-07!61;UBERON:0000064!9.28e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;6.21e-15;1!UBERON:0001785;6.21e-15;1!UBERON:0002464;6.21e-15;1!UBERON:0004904;6.21e-15;1!UBERON:0001021;6.21e-15;1!UBERON:0001737;1.00e-13;9!UBERON:0001557;1.00e-13;9!UBERON:0003714;4.09e-08;2!UBERON:0005162;4.09e-08;2!UBERON:0000122;4.09e-08;2!UBERON:0001897;4.37e-08;2!UBERON:0010225;4.37e-08;2!UBERON:0002148;7.03e-08;2!UBERON:0004903;7.03e-08;2!UBERON:0001875;7.03e-08;2!UBERON:0003566;7.03e-08;2!UBERON:0006331;7.03e-08;2!UBERON:0009662;7.03e-08;2!UBERON:0001777;7.03e-08;2!UBERON:0006514;7.03e-08;2!UBERON:0002173;7.03e-08;2!UBERON:0002186;7.03e-08;2!UBERON:0000125;9.37e-07;9!UBERON:0002308;9.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,6.22e-15,1;UBERON:0001785,6.22e-15,1;UBERON:0002464,6.22e-15,1;UBERON:0004904,6.22e-15,1;UBERON:0001021,6.22e-15,1;UBERON:0003902,6.22e-15,1;UBERON:0005425,6.22e-15,1;UBERON:0001737,7.36e-14,9;UBERON:0008947,1.09e-08,38;UBERON:0003258,1.09e-08,38;UBERON:0003714,4.09e-08,2;UBERON:0005162,4.09e-08,2;UBERON:0000122,4.09e-08,2;UBERON:0001897,4.38e-08,2;UBERON:0010225,4.38e-08,2;UBERON:0001875,7.52e-08,2;UBERON:0006514,7.52e-08,2;UBERON:0003566,8.04e-08,2;UBERON:0001777,8.04e-08,2;UBERON:0002148,8.60e-08,2;UBERON:0006331,8.60e-08,2;UBERON:0009662,8.60e-08,2;UBERON:0004903,9.19e-08,2;UBERON:0002173,9.19e-08,2;UBERON:0002186,9.19e-08,2;UBERON:0000072,5.21e-07,47;UBERON:0001557,7.49e-07,19 | |||
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|short_description=p@chr17:76483088..76483092,+ | |short_description=p@chr17:76483088..76483092,+ | ||
}} | }} |
Latest revision as of 22:03, 25 July 2015
Short description: | p@chr17:76483088..76483092, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:76483088..76483092, + |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.73e-15 | 1 |
plasma cell | 4.73e-15 | 1 |
plasmablast | 4.73e-15 | 1 |
mature B cell | 3.56e-08 | 2 |
pre-B-II cell | 3.56e-08 | 2 |
transitional stage B cell | 3.56e-08 | 2 |
small pre-B-II cell | 3.56e-08 | 2 |
immature B cell | 3.56e-08 | 2 |
keratocyte | 8.04e-08 | 2 |
migratory cranial neural crest cell | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 6.22e-15 | 1 |
cranial nerve | 6.22e-15 | 1 |
nerve trunk | 6.22e-15 | 1 |
nerve connecting eye with brain | 6.22e-15 | 1 |
nerve | 6.22e-15 | 1 |
retinal neural layer | 6.22e-15 | 1 |
presumptive neural retina | 6.22e-15 | 1 |
larynx | 7.36e-14 | 9 |
respiratory primordium | 1.09e-08 | 38 |
endoderm of foregut | 1.09e-08 | 38 |
neural tissue | 4.09e-08 | 2 |
multi cell component structure | 4.09e-08 | 2 |
neuron projection bundle | 4.09e-08 | 2 |
dorsal plus ventral thalamus | 4.38e-08 | 2 |
thalamic complex | 4.38e-08 | 2 |
globus pallidus | 7.52e-08 | 2 |
pallidum | 7.52e-08 | 2 |
head connective tissue | 8.04e-08 | 2 |
substantia propria of cornea | 8.04e-08 | 2 |
locus ceruleus | 8.60e-08 | 2 |
brainstem nucleus | 8.60e-08 | 2 |
hindbrain nucleus | 8.60e-08 | 2 |
bronchoalveolar duct junction | 9.19e-08 | 2 |
alveolar duct | 9.19e-08 | 2 |
bronchiole | 9.19e-08 | 2 |
segment of respiratory tract | 5.21e-07 | 47 |
upper respiratory tract | 7.49e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
anemia | 8.17e-15 | 1 |
genetic disease | 1.84e-14 | 1 |
monogenic disease | 1.84e-14 | 1 |
xeroderma pigmentosum | 1.84e-14 | 1 |
non-small cell lung carcinoma | 1.42e-11 | 5 |
hematopoietic system disease | 4.69e-08 | 2 |
lung adenocarcinoma | 9.19e-08 | 2 |
lung carcinoma | 8.10e-07 | 9 |