FFCP PHASE1:Hg19::chr1:102433144..102433146,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:102433144..102433146,- | |||
|coexpression_cluster_id=C358 | |coexpression_cluster_id=C358 | ||
|description=CAGE_peak_at_chr1:102433144..102433146,- | |description=CAGE_peak_at_chr1:102433144..102433146,- | ||
|id=chr1:102433144..102433146,- | |id=chr1:102433144..102433146,- | ||
|ontology_enrichment_celltype=CL:0000540!8.84e-07!6;CL:0000031!8.84e-07!6;CL:0000404!8.84e-07!6 | |ontology_enrichment_celltype=CL:0000540!8.84e-07!6;CL:0000031!8.84e-07!6;CL:0000404!8.84e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.85e-15;3 | |||
|ontology_enrichment_disease=DOID:171!4.08e-12!10;DOID:169!6.04e-07!6 | |ontology_enrichment_disease=DOID:171!4.08e-12!10;DOID:169!6.04e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:171;4.31e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.75e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.35e-38!57;UBERON:0005068!5.35e-38!57;UBERON:0006241!5.35e-38!57;UBERON:0007135!5.35e-38!57;UBERON:0002020!1.50e-37!34;UBERON:0003528!1.50e-37!34;UBERON:0002346!1.83e-37!90;UBERON:0001893!2.73e-37!34;UBERON:0002616!2.05e-36!59;UBERON:0000073!2.38e-36!94;UBERON:0001016!2.38e-36!94;UBERON:0002791!3.67e-35!33;UBERON:0001017!7.63e-35!82;UBERON:0001869!1.16e-33!32;UBERON:0003075!5.51e-33!86;UBERON:0007284!5.51e-33!86;UBERON:0005743!9.22e-33!86;UBERON:0002780!9.93e-33!41;UBERON:0001890!9.93e-33!41;UBERON:0006240!9.93e-33!41;UBERON:0003080!8.53e-32!42;UBERON:0000955!1.57e-31!69;UBERON:0006238!1.57e-31!69;UBERON:0002619!1.10e-29!22;UBERON:0001950!7.32e-29!20;UBERON:0000956!1.07e-25!25;UBERON:0000203!1.07e-25!25;UBERON:0000924!6.39e-24!173;UBERON:0006601!6.39e-24!173;UBERON:0003056!2.29e-23!61;UBERON:0004121!8.00e-21!169;UBERON:0007023!9.08e-20!115;UBERON:0000033!2.54e-17!123;UBERON:0000153!3.17e-17!129;UBERON:0007811!3.17e-17!129;UBERON:0002308!2.15e-13!9;UBERON:0000125!2.15e-13!9;UBERON:0001871!7.43e-12!7;UBERON:0000200!7.82e-11!6;UBERON:0002298!1.16e-10!8;UBERON:0002420!5.08e-10!9;UBERON:0007245!5.08e-10!9;UBERON:0010009!5.08e-10!9;UBERON:0010011!5.08e-10!9;UBERON:0000454!5.08e-10!9;UBERON:0004733!8.05e-10!12;UBERON:0002028!8.05e-10!12;UBERON:0007277!8.05e-10!12;UBERON:0000025!8.59e-10!194;UBERON:0009663!3.93e-09!7;UBERON:0002021!5.38e-09!5;UBERON:0002771!5.52e-09!3;UBERON:0004732!5.63e-09!13;UBERON:0000988!1.30e-08!3;UBERON:0001872!2.11e-08!5;UBERON:0000013!2.42e-08!5;UBERON:0002410!2.42e-08!5;UBERON:0006331!3.25e-08!3;UBERON:0003076!1.26e-07!15;UBERON:0003057!1.26e-07!15;UBERON:0000064!1.28e-07!219;UBERON:0002680!1.94e-07!9;UBERON:0001895!1.94e-07!9;UBERON:0010092!1.94e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!5.35e-38!57;UBERON:0005068!5.35e-38!57;UBERON:0006241!5.35e-38!57;UBERON:0007135!5.35e-38!57;UBERON:0002020!1.50e-37!34;UBERON:0003528!1.50e-37!34;UBERON:0002346!1.83e-37!90;UBERON:0001893!2.73e-37!34;UBERON:0002616!2.05e-36!59;UBERON:0000073!2.38e-36!94;UBERON:0001016!2.38e-36!94;UBERON:0002791!3.67e-35!33;UBERON:0001017!7.63e-35!82;UBERON:0001869!1.16e-33!32;UBERON:0003075!5.51e-33!86;UBERON:0007284!5.51e-33!86;UBERON:0005743!9.22e-33!86;UBERON:0002780!9.93e-33!41;UBERON:0001890!9.93e-33!41;UBERON:0006240!9.93e-33!41;UBERON:0003080!8.53e-32!42;UBERON:0000955!1.57e-31!69;UBERON:0006238!1.57e-31!69;UBERON:0002619!1.10e-29!22;UBERON:0001950!7.32e-29!20;UBERON:0000956!1.07e-25!25;UBERON:0000203!1.07e-25!25;UBERON:0000924!6.39e-24!173;UBERON:0006601!6.39e-24!173;UBERON:0003056!2.29e-23!61;UBERON:0004121!8.00e-21!169;UBERON:0007023!9.08e-20!115;UBERON:0000033!2.54e-17!123;UBERON:0000153!3.17e-17!129;UBERON:0007811!3.17e-17!129;UBERON:0002308!2.15e-13!9;UBERON:0000125!2.15e-13!9;UBERON:0001871!7.43e-12!7;UBERON:0000200!7.82e-11!6;UBERON:0002298!1.16e-10!8;UBERON:0002420!5.08e-10!9;UBERON:0007245!5.08e-10!9;UBERON:0010009!5.08e-10!9;UBERON:0010011!5.08e-10!9;UBERON:0000454!5.08e-10!9;UBERON:0004733!8.05e-10!12;UBERON:0002028!8.05e-10!12;UBERON:0007277!8.05e-10!12;UBERON:0000025!8.59e-10!194;UBERON:0009663!3.93e-09!7;UBERON:0002021!5.38e-09!5;UBERON:0002771!5.52e-09!3;UBERON:0004732!5.63e-09!13;UBERON:0000988!1.30e-08!3;UBERON:0001872!2.11e-08!5;UBERON:0000013!2.42e-08!5;UBERON:0002410!2.42e-08!5;UBERON:0006331!3.25e-08!3;UBERON:0003076!1.26e-07!15;UBERON:0003057!1.26e-07!15;UBERON:0000064!1.28e-07!219;UBERON:0002680!1.94e-07!9;UBERON:0001895!1.94e-07!9;UBERON:0010092!1.94e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.40e-36;22!UBERON:0000956;1.00e-31;25!UBERON:0000203;1.00e-31;25!UBERON:0001950;3.17e-31;20!UBERON:0003528;1.80e-27;34!UBERON:0002020;1.80e-27;34!UBERON:0002791;5.82e-27;32!UBERON:0001869;5.82e-27;32!UBERON:0001893;2.30e-21;34!UBERON:0002780;4.14e-20;41!UBERON:0001890;4.14e-20;41!UBERON:0002021;1.02e-19;5!UBERON:0000073;1.49e-17;53!UBERON:0002616;1.49e-17;53!UBERON:0001870;5.68e-15;3!UBERON:0003112;1.13e-11;1!UBERON:0011158;1.13e-11;1!UBERON:0003128;1.13e-11;1!UBERON:0001703;1.13e-11;1!UBERON:0002241;1.13e-11;1!UBERON:0002346;1.82e-11;4!UBERON:0000923;1.82e-11;4!UBERON:0010316;1.82e-11;4!UBERON:0005291;1.82e-11;4!UBERON:0002680;4.08e-11;9!UBERON:0001895;4.08e-11;9!UBERON:0002050;2.36e-09;5!UBERON:0005423;2.36e-09;5!UBERON:0000349;2.36e-09;5!UBERON:0000955;2.74e-09;68!UBERON:0004733;1.82e-08;12!UBERON:0002028;1.82e-08;12!UBERON:0000200;4.11e-08;6!UBERON:0001017;4.80e-08;75!UBERON:0002037;5.08e-08;6!UBERON:0004732;7.46e-08;13!UBERON:0001016;8.20e-08;83!UBERON:0001871;5.76e-07;6!UBERON:0002771;9.96e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.52e-36,22;UBERON:0003528,1.36e-34,34;UBERON:0002020,1.36e-34,34;UBERON:0000956,1.02e-31,25;UBERON:0000203,1.02e-31,25;UBERON:0001950,3.05e-31,20;UBERON:0000073,6.48e-31,53;UBERON:0002616,6.48e-31,53;UBERON:0002791,1.82e-30,32;UBERON:0001869,1.82e-30,32;UBERON:0001049,3.41e-29,56;UBERON:0005068,3.41e-29,56;UBERON:0006241,3.41e-29,56;UBERON:0007135,3.41e-29,56;UBERON:0001893,1.18e-28,34;UBERON:0002346,5.48e-25,86;UBERON:0002780,1.15e-23,41;UBERON:0001890,1.15e-23,41;UBERON:0003080,1.15e-23,41;UBERON:0006240,1.15e-23,41;UBERON:0000955,1.96e-23,68;UBERON:0006238,1.96e-23,68;UBERON:0001016,2.31e-20,89;UBERON:0002021,1.23e-19,5;UBERON:0001017,1.80e-19,81;UBERON:0003075,1.80e-19,82;UBERON:0007284,1.80e-19,82;UBERON:0003056,1.32e-15,61;UBERON:0001870,4.28e-15,3;UBERON:0010371,5.40e-15,104;UBERON:0010314,2.10e-13,132;UBERON:0004121,3.30e-13,171;UBERON:0000924,3.30e-13,171;UBERON:0006601,3.30e-13,171;UBERON:0003112,1.07e-11,1;UBERON:0011158,1.07e-11,1;UBERON:0003128,1.07e-11,1;UBERON:0001703,1.07e-11,1;UBERON:0002241,1.07e-11,1;UBERON:0004761,1.07e-11,1;UBERON:0009617,1.07e-11,1;UBERON:0007023,1.66e-11,114;UBERON:0002680,4.53e-11,9;UBERON:0001895,4.53e-11,9;UBERON:0010092,4.53e-11,9;UBERON:0000349,2.57e-09,5;UBERON:0004733,1.96e-08,12;UBERON:0002028,1.96e-08,12;UBERON:0007277,1.96e-08,12;UBERON:0011216,3.32e-08,223;UBERON:0000200,3.90e-08,6;UBERON:0002037,4.82e-08,6;UBERON:0006215,4.82e-08,6;UBERON:0004732,8.01e-08,13;UBERON:0000025,2.96e-07,192;UBERON:0001871,5.84e-07,6;UBERON:0003076,7.65e-07,15;UBERON:0003057,7.65e-07,15;UBERON:0002771,9.96e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0,0.242721043499027,0,0,0,0,0,0,1.40669416410513,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0.583209226766509,0,0,1.08536794762867,0,5.30780447669878,1.47773809476774,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.64608069485285,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,2.17925449778521,0,0.137539436597234,0,0,0,0.607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.05786081394152,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.244052529803926,2.50381861413,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.594719339945,0,0,0.163565394255844,0,0.491545817507439,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,2.51625506969434,0.327628914576042,0.678930119816101,2.12574920101683,1.73510069962603,0,0,0.47317047000752,0,0,0,0.642292250964595,0,4.31011419454308,2.46139637088906,1.26035848110859,0.138314504928436,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,0.781078098613847,2.48024155801421,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.679697329768317,0.0657727735628491,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.475940431336403,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.724030971033267,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35227839237992,0,0,0,0,0.242721043499027,0,0,0,0,0,0,1.40669416410513,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0.583209226766509,0,0,1.08536794762867,0,5.30780447669878,1.47773809476774,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0.134802265961354,0,0,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,1.64608069485285,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,2.17925449778521,0,0.137539436597234,0,0,0,0.607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.05786081394152,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.244052529803926,2.50381861413,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.594719339945,0,0,0.163565394255844,0,0.491545817507439,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,2.51625506969434,0.327628914576042,0.678930119816101,2.12574920101683,1.73510069962603,0,0,0.47317047000752,0,0,0,0.642292250964595,0,4.31011419454308,2.46139637088906,1.26035848110859,0.138314504928436,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.742913430802341,0.781078098613847,2.48024155801421,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.679697329768317,0.0657727735628491,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.475940431336403,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0.724030971033267,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:102433144..102433146,- | |short_description=p@chr1:102433144..102433146,- | ||
}} | }} |
Latest revision as of 19:02, 27 July 2015
Short description: | p@chr1:102433144..102433146, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:102433144..102433146, - |
Coexpression cluster: | C358_cerebellum_middle_occipital_parietal_pineal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.75e-10 | 10 |