FFCP PHASE1:Hg19::chr20:6033532..6033548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-83bp_to_AB527789_5end | |association_with_transcript=-83bp_to_AB527789_5end | ||
|cluster_id=chr20:6033532..6033548,- | |||
|coexpression_cluster_id=C548 | |||
|description=CAGE_peak_2_at_AB527789_5end | |description=CAGE_peak_2_at_AB527789_5end | ||
|id=chr20:6033532..6033548,- | |id=chr20:6033532..6033548,- | ||
|ontology_enrichment_celltype=CL:1000497!1.22e-25!18;CL:0002518!1.22e-25!18;CL:1000449!1.54e-21!16;CL:1000507!1.06e-20!12;CL:1000494!1.06e-20!12;CL:0002681!5.83e-15!13;CL:0002584!5.83e-15!13;CL:0000077!3.03e-09!19;CL:0000239!6.30e-09!3;CL:1000615!6.30e-09!3;CL:0002306!6.30e-09!3;CL:0000066!1.71e-07!254 | |ontology_enrichment_celltype=CL:1000497!1.22e-25!18;CL:0002518!1.22e-25!18;CL:1000449!1.54e-21!16;CL:1000507!1.06e-20!12;CL:1000494!1.06e-20!12;CL:0002681!5.83e-15!13;CL:0002584!5.83e-15!13;CL:0000077!3.03e-09!19;CL:0000239!6.30e-09!3;CL:1000615!6.30e-09!3;CL:0002306!6.30e-09!3;CL:0000066!1.71e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.16e-70;10!CL:1000494;4.16e-70;10!CL:1000497;3.38e-58;17!CL:0002518;3.38e-58;17!CL:1000449;9.08e-56;15!CL:0002681;9.60e-37;12!CL:0002584;9.60e-37;12!CL:0000239;1.17e-22;3!CL:1000615;1.17e-22;3!CL:0002306;1.17e-22;3!CL:0000650;7.59e-15;2!CL:1000500;7.59e-15;2!CL:1000618;7.59e-15;2!CL:1001318;7.59e-15;2!CL:0002173;7.59e-15;2!CL:0000632;2.11e-10;3!CL:1000746;1.74e-09;7!CL:1000612;1.74e-09;7!CL:0000669;7.19e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.88e-70,10;CL:1000494,1.88e-70,10;CL:1000497,1.50e-58,17;CL:0002518,1.50e-58,17;CL:1000449,3.91e-56,15;CL:0002681,5.07e-37,12;CL:0002584,5.07e-37,12;CL:0000239,9.42e-23,3;CL:1000615,9.42e-23,3;CL:0002306,9.42e-23,3;CL:0000650,4.61e-15,2;CL:1000500,4.61e-15,2;CL:1000618,4.61e-15,2;CL:1001318,4.61e-15,2;CL:0002173,4.61e-15,2;CL:0000632,1.97e-10,3;CL:1000746,1.21e-09,7;CL:1000612,1.21e-09,7;CL:0000669,5.62e-08,4;CL:0000066,1.48e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.26e-08!14 | |ontology_enrichment_disease=DOID:2394!5.26e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.26e-12;14!DOID:3111;2.84e-08;1!DOID:3603;2.84e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.65e-12,14;DOID:3111,3.79e-08,1;DOID:3603,3.79e-08,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;4.16e-70;10!UBERON:0009773;4.16e-70;10!UBERON:0001231;4.16e-70;10!UBERON:0004810;4.16e-70;10!UBERON:0006555;9.08e-56;15!UBERON:0004819;9.08e-56;15!UBERON:0001285;9.08e-56;15!UBERON:0007684;9.08e-56;15!UBERON:0002113;1.27e-40;24!UBERON:0011143;1.27e-40;24!UBERON:0001225;9.60e-37;12!UBERON:0008987;9.60e-37;12!UBERON:0000489;2.96e-33;29!UBERON:0006554;4.47e-32;30!UBERON:0001008;4.47e-32;30!UBERON:0001851;3.38e-29;15!UBERON:0000353;3.38e-29;15!UBERON:0006853;1.17e-22;3!UBERON:0007685;1.17e-22;3!UBERON:0004134;1.17e-22;3!UBERON:0005172;3.08e-16;52!UBERON:0005173;3.08e-16;52!UBERON:0003567;7.59e-15;2!UBERON:0003838;7.59e-15;2!UBERON:0003586;7.59e-15;2!UBERON:0005169;7.59e-15;2!UBERON:0002321;7.59e-15;2!UBERON:0005215;7.59e-15;2!UBERON:0002303;7.59e-15;2!UBERON:0002319;7.59e-15;2!UBERON:0002417;4.52e-12;58!UBERON:0000916;4.52e-12;58!UBERON:0000074;1.74e-09;7!UBERON:0001229;1.74e-09;7!UBERON:0003891;7.19e-08;4!UBERON:0005177;1.51e-07;99!UBERON:0003103;1.63e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.88e-70,10;UBERON:0004211,3.91e-56,15;UBERON:0009773,3.91e-56,15;UBERON:0001231,3.91e-56,15;UBERON:0001285,3.91e-56,15;UBERON:0007684,3.91e-56,15;UBERON:0004208,3.91e-56,15;UBERON:0006555,1.63e-52,16;UBERON:0004819,1.63e-52,16;UBERON:0002113,1.46e-37,26;UBERON:0003918,1.46e-37,26;UBERON:0011143,1.46e-37,26;UBERON:0005095,1.46e-37,26;UBERON:0007687,1.46e-37,26;UBERON:0001225,5.07e-37,12;UBERON:0008987,5.07e-37,12;UBERON:0000489,3.66e-31,31;UBERON:0001851,2.04e-29,15;UBERON:0000353,2.04e-29,15;UBERON:0005172,2.41e-23,54;UBERON:0005173,2.41e-23,54;UBERON:0006554,2.73e-23,47;UBERON:0001008,9.37e-23,48;UBERON:0006853,9.42e-23,3;UBERON:0007685,9.42e-23,3;UBERON:0004134,9.42e-23,3;UBERON:0002417,9.54e-21,60;UBERON:0000916,9.54e-21,60;UBERON:0003567,4.61e-15,2;UBERON:0003838,4.61e-15,2;UBERON:0003586,4.61e-15,2;UBERON:0005169,4.61e-15,2;UBERON:0002321,4.61e-15,2;UBERON:0005215,4.61e-15,2;UBERON:0002303,4.61e-15,2;UBERON:0002319,4.61e-15,2;UBERON:0003103,4.97e-13,68;UBERON:0005177,2.97e-11,101;UBERON:0009569,6.84e-10,112;UBERON:0010532,1.21e-09,7;UBERON:0000074,1.21e-09,7;UBERON:0001229,1.21e-09,7;UBERON:0001230,1.21e-09,7;UBERON:0003220,1.21e-09,7;UBERON:0005749,1.21e-09,7;UBERON:0004199,1.21e-09,7;UBERON:0004209,1.21e-09,7;UBERON:0004198,1.21e-09,7;UBERON:0003104,1.32e-09,160;UBERON:0009142,1.32e-09,160;UBERON:0003914,2.36e-09,117;UBERON:0005103,1.70e-08,8;UBERON:0000083,1.70e-08,8;UBERON:0009201,1.70e-08,8;UBERON:0006553,1.70e-08,8;UBERON:0003074,1.70e-08,8;UBERON:0003060,1.70e-08,8;UBERON:0003891,5.62e-08,4;UBERON:0000080,1.32e-07,9;UBERON:0002120,1.32e-07,9;UBERON:0004875,1.32e-07,9;UBERON:0005721,1.32e-07,9;UBERON:0005754,1.32e-07,9;UBERON:0007297,1.32e-07,9 | |||
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|short_description=p2@AB527789 | |short_description=p2@AB527789 | ||
}} | }} |
Latest revision as of 16:04, 28 July 2015
Short description: | p2@AB527789 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB527789_5end |
Coexpression cluster: | C548_Mesothelial_mesenchymal_rhabdomyosarcoma_Renal_mesothelioma_Hepatic_clear |
Association with transcript: | -83bp_to_AB527789_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.88e-70 | 10 |
nephron tubule epithelial cell | 1.88e-70 | 10 |
kidney cell | 1.50e-58 | 17 |
kidney epithelial cell | 1.50e-58 | 17 |
epithelial cell of nephron | 3.91e-56 | 15 |
kidney cortical cell | 5.07e-37 | 12 |
renal cortical epithelial cell | 5.07e-37 | 12 |
brush border epithelial cell | 9.42e-23 | 3 |
kidney cortex tubule cell | 9.42e-23 | 3 |
epithelial cell of proximal tubule | 9.42e-23 | 3 |
mesangial cell | 4.61e-15 | 2 |
kidney interstitial cell | 4.61e-15 | 2 |
juxtaglomerular complex cell | 4.61e-15 | 2 |
renal interstitial pericyte | 4.61e-15 | 2 |
extraglomerular mesangial cell | 4.61e-15 | 2 |
hepatic stellate cell | 1.97e-10 | 3 |
glomerular cell | 1.21e-09 | 7 |
kidney corpuscule cell | 1.21e-09 | 7 |
pericyte cell | 5.62e-08 | 4 |
epithelial cell | 1.48e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.65e-12 | 14 |
cystadenocarcinoma | 3.79e-08 | 1 |
mucinous cystadenocarcinoma | 3.79e-08 | 1 |