FFCP PHASE1:Hg19::chr2:162840716..162840718,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:162840716..162840718,+ | |||
|description=CAGE_peak_at_chr2:162840716..162840718,+ | |description=CAGE_peak_at_chr2:162840716..162840718,+ | ||
|id=chr2:162840716..162840718,+ | |id=chr2:162840716..162840718,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.78e-26;1!CL:0000911;2.78e-26;1!CL:0000814;2.78e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.78e-26,1;CL:0000914,2.78e-26,1;CL:0000911,2.78e-26,1;CL:0000814,2.78e-26,1;CL:0002042,2.78e-26,1;CL:0002039,2.78e-26,1;CL:0002040,2.78e-26,1;CL:0002041,2.78e-26,1;CL:0000893,7.30e-14,2;CL:0002489,7.30e-14,2;CL:0000809,7.30e-14,2;CL:0000808,7.30e-14,2;CL:0000894,7.30e-14,2;CL:0000806,7.30e-14,2;CL:0000807,7.30e-14,2;CL:0000805,7.30e-14,2;CL:0002425,7.30e-14,2 | |||
|ontology_enrichment_development_v019=CL:0002425;7.30e-14;2 | |||
|ontology_enrichment_disease=DOID:5409!4.51e-08!4 | |ontology_enrichment_disease=DOID:5409!4.51e-08!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.12e-59!57;UBERON:0005068!1.12e-59!57;UBERON:0006241!1.12e-59!57;UBERON:0007135!1.12e-59!57;UBERON:0001017!3.18e-53!82;UBERON:0000955!1.30e-50!69;UBERON:0006238!1.30e-50!69;UBERON:0005743!2.23e-50!86;UBERON:0002616!3.44e-50!59;UBERON:0002020!6.14e-49!34;UBERON:0003528!6.14e-49!34;UBERON:0001869!1.21e-47!32;UBERON:0002619!4.70e-47!22;UBERON:0000073!7.81e-45!94;UBERON:0001016!7.81e-45!94;UBERON:0001893!1.38e-44!34;UBERON:0002780!1.30e-43!41;UBERON:0001890!1.30e-43!41;UBERON:0006240!1.30e-43!41;UBERON:0003080!1.89e-42!42;UBERON:0002791!8.83e-42!33;UBERON:0000956!4.39e-41!25;UBERON:0000203!4.39e-41!25;UBERON:0001950!1.74e-40!20;UBERON:0003075!1.05e-39!86;UBERON:0007284!1.05e-39!86;UBERON:0002346!1.40e-37!90;UBERON:0003056!1.63e-27!61;UBERON:0000153!4.35e-27!129;UBERON:0007811!4.35e-27!129;UBERON:0000033!7.86e-27!123;UBERON:0007023!4.59e-26!115;UBERON:0004121!3.14e-21!169;UBERON:0000924!1.55e-20!173;UBERON:0006601!1.55e-20!173;UBERON:0001872!3.35e-18!5;UBERON:0003076!9.93e-18!15;UBERON:0003057!9.93e-18!15;UBERON:0001871!9.58e-16!7;UBERON:0000200!1.75e-15!6;UBERON:0000025!4.79e-15!194;UBERON:0004733!8.47e-14!12;UBERON:0002028!8.47e-14!12;UBERON:0007277!8.47e-14!12;UBERON:0004732!1.17e-12!13;UBERON:0002771!4.11e-12!3;UBERON:0000349!9.00e-12!5;UBERON:0002298!5.14e-11!8;UBERON:0000988!5.88e-11!3;UBERON:0004111!1.75e-10!241;UBERON:0000064!1.02e-09!219;UBERON:0002308!1.24e-09!9;UBERON:0000125!1.24e-09!9;UBERON:0002680!1.29e-09!9;UBERON:0001895!1.29e-09!9;UBERON:0010092!1.29e-09!9;UBERON:0000477!5.04e-09!286;UBERON:0001954!1.24e-08!2;UBERON:0003022!1.24e-08!2;UBERON:0002421!1.24e-08!2;UBERON:0002600!1.24e-08!2;UBERON:0000369!1.74e-08!4;UBERON:0002435!1.74e-08!4;UBERON:0000204!1.74e-08!4;UBERON:0010082!1.74e-08!4;UBERON:0002148!4.16e-08!2;UBERON:0009662!4.16e-08!2;UBERON:0000483!9.17e-08!309;UBERON:0000119!1.31e-07!312;UBERON:0000475!1.45e-07!365;UBERON:0002021!3.06e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;7.62e-26;1!UBERON:0001954;7.30e-14;2!UBERON:0003022;7.30e-14;2!UBERON:0002421;7.30e-14;2!UBERON:0002600;7.30e-14;2!UBERON:0002360;1.21e-13;2!UBERON:0000094;1.21e-13;2!UBERON:0010743;1.21e-13;2!UBERON:0002791;5.64e-12;32!UBERON:0001869;4.95e-11;32!UBERON:0002619;2.19e-10;22!UBERON:0001893;2.59e-10;34!UBERON:0005383;1.53e-09;3!UBERON:0005382;1.53e-09;3!UBERON:0003528;1.55e-09;34!UBERON:0002020;1.55e-09;34!UBERON:0000956;2.90e-09;25!UBERON:0000203;2.90e-09;25!UBERON:0001017;2.88e-08;75!UBERON:0002780;5.79e-08;41!UBERON:0001890;5.79e-08;41!UBERON:0000369;1.80e-07;4!UBERON:0002435;1.80e-07;4!UBERON:0000204;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,5.93e-26,1;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0002360,1.21e-13,2;UBERON:0000094,1.21e-13,2;UBERON:0010743,1.21e-13,2;UBERON:0002791,2.12e-12,32;UBERON:0001869,2.12e-12,32;UBERON:0003528,1.02e-11,34;UBERON:0002020,1.02e-11,34;UBERON:0001893,1.02e-11,34;UBERON:0001017,8.24e-11,81;UBERON:0002619,2.49e-10,22;UBERON:0002780,7.75e-10,41;UBERON:0001890,7.75e-10,41;UBERON:0003080,7.75e-10,41;UBERON:0006240,7.75e-10,41;UBERON:0001016,9.27e-10,89;UBERON:0005383,1.41e-09,3;UBERON:0005382,1.41e-09,3;UBERON:0000956,3.25e-09,25;UBERON:0000203,3.25e-09,25;UBERON:0000955,4.61e-09,68;UBERON:0006238,4.61e-09,68;UBERON:0000073,9.77e-08,53;UBERON:0002616,9.77e-08,53;UBERON:0002370,1.40e-07,4;UBERON:0005058,1.40e-07,4;UBERON:0009113,1.40e-07,4;UBERON:0003295,1.40e-07,4;UBERON:0005562,1.40e-07,4;UBERON:0000369,1.69e-07,4;UBERON:0002435,1.69e-07,4;UBERON:0000204,1.69e-07,4;UBERON:0010082,1.69e-07,4;UBERON:0001049,2.39e-07,56;UBERON:0005068,2.39e-07,56;UBERON:0006241,2.39e-07,56;UBERON:0007135,2.39e-07,56;UBERON:0003056,8.79e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,2.49861453104692,0,0,0.604820229674197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4658731678576,0.985153801009636,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,1.99613798001194,0.260427761085233,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0.886642856860642,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.876336514945499,0.573409195690071,0.776503360757966,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,1.02558182120378,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.460409414939944,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0.109940516745429,0.301925687133347,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,2.49861453104692,0,0,0.604820229674197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4658731678576,0.985153801009636,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,1.99613798001194,0.260427761085233,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0.886642856860642,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.876336514945499,0.573409195690071,0.776503360757966,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.638535436228605,1.02558182120378,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.460409414939944,0,0,0,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0.109940516745429,0.301925687133347,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:162840716..162840718,+ | |short_description=p@chr2:162840716..162840718,+ | ||
}} | }} |
Latest revision as of 01:56, 29 July 2015
Short description: | p@chr2:162840716..162840718, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:162840716..162840718, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.78e-26 | 1 |
immature NK T cell | 2.78e-26 | 1 |
effector T cell | 2.78e-26 | 1 |
mature NK T cell | 2.78e-26 | 1 |
immature NK T cell stage IV | 2.78e-26 | 1 |
immature NK T cell stage I | 2.78e-26 | 1 |
immature NK T cell stage II | 2.78e-26 | 1 |
immature NK T cell stage III | 2.78e-26 | 1 |
thymocyte | 7.30e-14 | 2 |
double negative thymocyte | 7.30e-14 | 2 |
double-positive, alpha-beta thymocyte | 7.30e-14 | 2 |
DN4 thymocyte | 7.30e-14 | 2 |
DN1 thymic pro-T cell | 7.30e-14 | 2 |
DN2 thymocyte | 7.30e-14 | 2 |
DN3 thymocyte | 7.30e-14 | 2 |
immature single positive thymocyte | 7.30e-14 | 2 |
early T lineage precursor | 7.30e-14 | 2 |