FFCP PHASE1:Hg19::chr2:45168617..45168631,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:45168617..45168631,- to FFCP PHASE1:Hg19::chr2:45168617..45168631,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000456467_5end | |||
|cluster_id=chr2:45168617..45168631,- | |||
|coexpression_cluster_id=C573 | |||
|description=CAGE_peak_1_at_ENST00000456467_5end | |||
|id=chr2:45168617..45168631,- | |||
|ontology_enrichment_celltype=CL:0000064!1.97e-16!3;CL:0005012!1.97e-16!3;CL:0000067!1.97e-16!3;CL:0002304!1.97e-16!3;CL:0002586!3.46e-16!3;CL:0002322!3.98e-16!5;CL:0000147!1.26e-12!14;CL:0000149!2.90e-12!4;CL:0000306!3.13e-12!4;CL:0002222!3.13e-12!4;CL:0002224!3.13e-12!4;CL:0000075!5.34e-11!27;CL:0000325!4.51e-09!39 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.43e-54;3!CL:0000067;3.43e-54;3!CL:0005012;3.43e-54;3!CL:0002304;3.43e-54;3!CL:0002586;4.31e-25;3!CL:0000306;3.41e-19;4!CL:0002222;3.41e-19;4!CL:0002224;3.41e-19;4!CL:0000149;4.29e-19;4!CL:0000075;7.90e-17;27!CL:0000710;9.87e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.76e-54,3;CL:0000067,3.76e-54,3;CL:0005012,3.76e-54,3;CL:0002304,3.76e-54,3;CL:0002586,4.87e-25,3;CL:0000306,3.26e-19,4;CL:0002222,3.26e-19,4;CL:0002224,3.26e-19,4;CL:0000149,4.70e-19,4;CL:0000075,7.90e-17,27;CL:0000710,1.00e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.97e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007625;1.51e-79;11!UBERON:0000970;7.74e-72;20!UBERON:0002104;2.08e-68;21!UBERON:0000020;1.92e-62;23!UBERON:0000019;6.58e-60;19!UBERON:0000047;6.58e-60;19!UBERON:0004088;6.58e-60;19!UBERON:0010230;6.58e-60;19!UBERON:0001032;7.85e-60;24!UBERON:0004456;7.85e-60;24!UBERON:0001778;3.43e-54;3!UBERON:0001775;3.43e-54;3!UBERON:0001456;3.43e-54;21!UBERON:0000488;7.06e-41;4!UBERON:0000966;5.98e-33;5!UBERON:0005388;5.98e-33;5!UBERON:0001802;5.98e-33;5!UBERON:0001801;3.00e-32;14!UBERON:0002203;1.54e-27;6!UBERON:0001768;1.54e-27;6!UBERON:0002200;1.54e-27;6!UBERON:0010371;4.13e-26;31!UBERON:0001781;4.31e-25;3!UBERON:0001782;4.31e-25;3!UBERON:0010077;3.41e-19;4!UBERON:0005389;3.41e-19;4!UBERON:0000484;3.41e-19;4!UBERON:0000965;3.41e-19;4!UBERON:0001803;3.41e-19;4!UBERON:0001444;1.81e-15;48!UBERON:0006876;2.31e-15;11!UBERON:0000033;2.05e-13;50!UBERON:0007811;7.99e-11;52!UBERON:0000153;1.64e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.70e-79,11;UBERON:0000970,1.93e-68,21;UBERON:0002104,1.93e-68,21;UBERON:0000020,7.33e-60,24;UBERON:0001032,7.33e-60,24;UBERON:0004456,7.33e-60,24;UBERON:0000019,7.11e-57,20;UBERON:0000047,7.11e-57,20;UBERON:0010312,7.11e-57,20;UBERON:0004088,7.11e-57,20;UBERON:0010230,7.11e-57,20;UBERON:0003072,7.11e-57,20;UBERON:0004128,7.11e-57,20;UBERON:0003071,7.11e-57,20;UBERON:0001778,3.76e-54,3;UBERON:0001775,3.76e-54,3;UBERON:0001456,1.08e-51,22;UBERON:0000488,7.56e-41,4;UBERON:0005085,1.25e-36,31;UBERON:0001801,3.00e-32,14;UBERON:0000966,1.47e-27,6;UBERON:0005388,1.47e-27,6;UBERON:0001802,1.47e-27,6;UBERON:0002203,1.61e-27,6;UBERON:0001768,1.61e-27,6;UBERON:0002200,1.61e-27,6;UBERON:0001782,4.87e-25,3;UBERON:0005424,4.87e-25,3;UBERON:0001444,4.51e-23,49;UBERON:0003056,6.30e-23,61;UBERON:0000033,3.82e-20,56;UBERON:0010077,3.26e-19,4;UBERON:0005389,3.26e-19,4;UBERON:0000484,3.26e-19,4;UBERON:0002546,3.26e-19,4;UBERON:0000965,3.26e-19,4;UBERON:0001803,3.26e-19,4;UBERON:0003073,3.26e-19,4;UBERON:0005426,3.26e-19,4;UBERON:0001781,4.70e-19,4;UBERON:0000153,3.69e-18,62;UBERON:0007811,3.69e-18,62;UBERON:0003075,5.26e-17,82;UBERON:0007284,5.26e-17,82;UBERON:0002346,3.36e-16,86;UBERON:0006876,2.37e-15,11;UBERON:0010371,2.50e-13,104;UBERON:0010314,2.14e-10,132;UBERON:0000076,4.22e-10,8;UBERON:0001048,1.44e-08,160;UBERON:0004121,8.71e-08,171;UBERON:0000924,8.71e-08,171;UBERON:0006601,8.71e-08,171 | |||
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|short_description=p1@ENST00000456467 | |||
}} | }} |
Latest revision as of 10:23, 29 July 2015
Short description: | p1@ENST00000456467 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000456467_5end |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | 1bp_to_ENST00000456467_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.76e-54 | 3 |
ciliated epithelial cell | 3.76e-54 | 3 |
multi-ciliated epithelial cell | 3.76e-54 | 3 |
non-pigmented ciliary epithelial cell | 3.76e-54 | 3 |
retinal pigment epithelial cell | 4.87e-25 | 3 |
crystallin accumulating cell | 3.26e-19 | 4 |
vertebrate lens cell | 3.26e-19 | 4 |
lens epithelial cell | 3.26e-19 | 4 |
visual pigment cell | 4.70e-19 | 4 |
columnar/cuboidal epithelial cell | 7.90e-17 | 27 |
neurecto-epithelial cell | 1.00e-08 | 20 |