FFCP PHASE1:Hg19::chr5:167689852..167689867,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:167689852..167689867,+ | |||
|coexpression_cluster_id=C1956 | |coexpression_cluster_id=C1956 | ||
|description=CAGE_peak_at_chr5:167689852..167689867,+ | |description=CAGE_peak_at_chr5:167689852..167689867,+ | ||
|id=chr5:167689852..167689867,+ | |id=chr5:167689852..167689867,+ | ||
|ontology_enrichment_celltype=CL:0002620;9.23e-17;23!CL:0002159;9.69e-15;14!CL:0000362;1.56e-08;9!CL:0002076;6.41e-07;42 | |ontology_enrichment_celltype=CL:0002620!7.30e-09!23;CL:0002159!1.24e-07!13;CL:0002076!7.29e-07!43 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;9.23e-17;23!CL:0002159;9.69e-15;14!CL:0000362;1.56e-08;9!CL:0002076;6.41e-07;42 | ||
|ontology_enrichment_disease=DOID:17;2.27e-12;5!DOID:450;2.27e-12;5!DOID:66;2.27e-12;5!DOID:423;2.27e-12;5!DOID:0080000;2.27e-12;5!DOID:11722;2.27e-12;5 | |ontology_enrichment_celltype_v019_2=CL:0002620,1.17e-16,23;CL:0002159,1.37e-14,14;CL:0000362,2.25e-08,9;CL:0002076,5.87e-08,42;CL:0000076,1.91e-07,63 | ||
|ontology_enrichment_uberon=UBERON:0002097;2.48e-13;41!UBERON:0002199;1.03e-10;46!UBERON:0002416;1.03e-10;46!UBERON:0002619;2.62e-10;22!UBERON:0003102;4.05e-10;50!UBERON:0002791;8.97e-10;32!UBERON:0001869;1.86e-09;32!UBERON:0000956;8.12e-09;25!UBERON:0000203;8.12e-09;25!UBERON:0003528;9.40e-09;34!UBERON:0002020;9.40e-09;34!UBERON:0002780;2.45e-08;41!UBERON:0001890;2.45e-08;41!UBERON:0001950;8.48e-08;20!UBERON:0001893;1.31e-07;34 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.27e-12;5!DOID:450;2.27e-12;5!DOID:66;2.27e-12;5!DOID:423;2.27e-12;5!DOID:0080000;2.27e-12;5!DOID:11722;2.27e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.60e-12,5;DOID:450,2.60e-12,5;DOID:66,2.60e-12,5;DOID:423,2.60e-12,5;DOID:0080000,2.60e-12,5;DOID:11722,2.60e-12,5;DOID:7,4.30e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002346!4.97e-22!90;UBERON:0001049!7.11e-22!57;UBERON:0005068!7.11e-22!57;UBERON:0006241!7.11e-22!57;UBERON:0007135!7.11e-22!57;UBERON:0000955!9.61e-22!69;UBERON:0006238!9.61e-22!69;UBERON:0000033!1.18e-21!123;UBERON:0003075!1.22e-21!86;UBERON:0007284!1.22e-21!86;UBERON:0000153!1.58e-21!129;UBERON:0007811!1.58e-21!129;UBERON:0000924!1.32e-20!173;UBERON:0006601!1.32e-20!173;UBERON:0002616!3.26e-20!59;UBERON:0004121!4.60e-20!169;UBERON:0002780!1.57e-19!41;UBERON:0001890!1.57e-19!41;UBERON:0006240!1.57e-19!41;UBERON:0003080!8.86e-19!42;UBERON:0001017!2.58e-18!82;UBERON:0001869!4.12e-18!32;UBERON:0003056!4.57e-18!61;UBERON:0002020!1.05e-17!34;UBERON:0003528!1.05e-17!34;UBERON:0001893!1.48e-17!34;UBERON:0005743!1.97e-17!86;UBERON:0002791!5.03e-17!33;UBERON:0002619!7.47e-17!22;UBERON:0000073!8.36e-17!94;UBERON:0001016!8.36e-17!94;UBERON:0000956!2.64e-15!25;UBERON:0000203!2.64e-15!25;UBERON:0001950!4.22e-15!20;UBERON:0000475!2.30e-14!365;UBERON:0007023!2.11e-10!115;UBERON:0002097!2.35e-10!40;UBERON:0000062!4.42e-09!511;UBERON:0000064!1.61e-08!219;UBERON:0002199!2.76e-08!45;UBERON:0002416!2.76e-08!45;UBERON:0001871!2.84e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.48e-13;41!UBERON:0002199;1.03e-10;46!UBERON:0002416;1.03e-10;46!UBERON:0002619;2.62e-10;22!UBERON:0003102;4.05e-10;50!UBERON:0002791;8.97e-10;32!UBERON:0001869;1.86e-09;32!UBERON:0000956;8.12e-09;25!UBERON:0000203;8.12e-09;25!UBERON:0003528;9.40e-09;34!UBERON:0002020;9.40e-09;34!UBERON:0002780;2.45e-08;41!UBERON:0001890;2.45e-08;41!UBERON:0001950;8.48e-08;20!UBERON:0001893;1.31e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.15e-17,41;UBERON:0002199,1.22e-14,46;UBERON:0002416,1.22e-14,46;UBERON:0010371,3.55e-13,104;UBERON:0003102,1.55e-12,99;UBERON:0002780,1.53e-11,41;UBERON:0001890,1.53e-11,41;UBERON:0003080,1.53e-11,41;UBERON:0006240,1.53e-11,41;UBERON:0002791,2.22e-10,32;UBERON:0001869,2.22e-10,32;UBERON:0002619,2.49e-10,22;UBERON:0003528,1.38e-09,34;UBERON:0002020,1.38e-09,34;UBERON:0001893,1.38e-09,34;UBERON:0003056,1.53e-09,61;UBERON:0001049,1.87e-09,56;UBERON:0005068,1.87e-09,56;UBERON:0006241,1.87e-09,56;UBERON:0007135,1.87e-09,56;UBERON:0004121,3.68e-09,171;UBERON:0000924,3.68e-09,171;UBERON:0006601,3.68e-09,171;UBERON:0000073,4.37e-09,53;UBERON:0002616,4.37e-09,53;UBERON:0000956,7.79e-09,25;UBERON:0000203,7.79e-09,25;UBERON:0002346,1.16e-08,86;UBERON:0003075,2.23e-08,82;UBERON:0007284,2.23e-08,82;UBERON:0001950,8.55e-08,20;UBERON:0000955,1.13e-07,68;UBERON:0006238,1.13e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0.984968464614303,0.204000691244253,0.940364164434263,0,0.273748850145768,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.579386075843295,0,0,0.756278537312543,0.665188192387692,0.87834785693126,0,2.18577172975525,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0.74000264525148,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0,0,11.4809366840872,4.05759038755278,3.60284231971255,6.60200411385685,2.16410311400722,5.15281080091258,1.30281799432113,7.25738228637445,2.43592512902997,7.32057945307932,2.11714766877288,0,10.2952781829818,1.20902517873168,1.3564847384839,0.773043412653187,3.27295344709002,1.43402297694502,0,0,0,0,0,0,0,0,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74508496477641,5.70701484124853,1.1240175325762,4.32274581370013,2.68506490959736,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,9.91094556373271,8.79005602902796,0.985143749731331,2.90633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,2.41151501647669,0,10.2972180917519,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0.841980283299221,0,1.53512174720011,0.160853921143607,0,0,0,0,0,0,0,1.60405176242628,0.184161977871793,0,0,0,0,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.824125183365091,0.165018999841176,1.14853107599234,3.25030123018261,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,2.80984356113663,2.11409074101617,2.04180339991335,2.2254711788221,0,0.62962469366128,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0.211107635297664,0,0,0,1.15466535270614,0.670302275535787,2.17781969722645,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,1.26602474769461,0.556543525114529,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0.969332746095218,1.02044907978036,1.99613798001194,0,0,0,0.1137934482855,0,0,0,1.74962768029953,0,0,1.20596438625408,1.52581736317083,0.110579259931225,0,0.219385397153973,0,0,0.230850775511391,3.30431961956303,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0,0,0,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0.91821828489147,0.252746318513952,0,0,0,0,0,0,0,1.24807205711825,0,0.195984794828755,0,0,0.859930162358083,0,0,0,0.193978032976839,0,0.451961481561065,2.60379656828827,0.19871461170299,0.633107959558787,0,0.240476460754601,0,0,0,0.114536596165916,0,0,0,0,0.271808412147228,0.313808538937,0.203996435272644,0,1.20084057741958,0.136905378891993,0,0,0,0.279282401272254,5.04152932825704,0,1.59743200399193,4.29226048136571,0.446342914883745,0.134366944973453,2.16179930125442,0,0,0,0,0,0,3.97614844904652,1.49823746722733,0,0,0,0,0,0.242998226632099,0.670869375198532,0,0.0524545881349981,0,0,0,0.714695326373367,2.64836788146173,2.034148301238,0,0,0,0,0,0.851940108927109,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,1.95242023843141,1.1267183763585,0,0.332787154610557,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0.907385542579434,0,0,0.159296767163702,0,0.931577741257556,0,0.265841714557995,0.521745061811734,0.150257608997218,7.23529903120711,1.62748293281865,0.181848659202559,0.966695013382396,0,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0.385239660814607,0,5.74187442323465,6.34776591434363,0.231522474323834,0,0,12.3520578864389,0.438568099157414,7.59763327567289,4.62993691850196,0.168942440653073,0,0,0,1.93561810612423,0,0,0,1.96565909307848,0,0,0.19998739585493,0,0.344429959321631,0,0,0.139879507719444,0,0,0,4.4034463719651,0,0,3.61377364172861,0.743614585554013,0.558644917973244,0.636008701306837,0,0,0,0,0.578063025868136,1.41696576325585,2.07524016774297,0.205116364240755,1.00828678488687,0.138314504928436,1.93770774758221,0,0.392590874004102,0,2.93485757634686,4.62102664601353,4.95796724107317,0,0.198916222116275,0,4.43751151147744,0,0,0,0,0.405225507710368,0.781078098613847,3.51367554052013,0.380494861163441,0.546974809018219,0,0.496211178389294,0,0,5.35701835878287,3.36283722218824,0,0.227662191351298,0,0,0,0.543757863814654,0.394636641377094,0,0,0,2.04250266890802,0,0,1.51149313853035,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.0981502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| ||
|short_description=p@chr5:167689852..167689867,+ | |short_description=p@chr5:167689852..167689867,+ | ||
}} | }} |
Latest revision as of 12:46, 30 July 2015
Short description: | p@chr5:167689852..167689867, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167689852..167689867, + |
Coexpression cluster: | C1956_Fibroblast_mesothelioma_Mesothelial_pineal_Mallassezderived_mesenchymal_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.17e-16 | 23 |
general ecto-epithelial cell | 1.37e-14 | 14 |
epidermal cell | 2.25e-08 | 9 |
endo-epithelial cell | 5.87e-08 | 42 |
squamous epithelial cell | 1.91e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.15e-17 | 41 |
integument | 1.22e-14 | 46 |
integumental system | 1.22e-14 | 46 |
ecto-epithelium | 3.55e-13 | 104 |
surface structure | 1.55e-12 | 99 |
regional part of forebrain | 1.53e-11 | 41 |
forebrain | 1.53e-11 | 41 |
anterior neural tube | 1.53e-11 | 41 |
future forebrain | 1.53e-11 | 41 |
regional part of telencephalon | 2.22e-10 | 32 |
cerebral hemisphere | 2.22e-10 | 32 |
regional part of cerebral cortex | 2.49e-10 | 22 |
brain grey matter | 1.38e-09 | 34 |
gray matter | 1.38e-09 | 34 |
telencephalon | 1.38e-09 | 34 |
pre-chordal neural plate | 1.53e-09 | 61 |
neural tube | 1.87e-09 | 56 |
neural rod | 1.87e-09 | 56 |
future spinal cord | 1.87e-09 | 56 |
neural keel | 1.87e-09 | 56 |
ectoderm-derived structure | 3.68e-09 | 171 |
ectoderm | 3.68e-09 | 171 |
presumptive ectoderm | 3.68e-09 | 171 |
regional part of nervous system | 4.37e-09 | 53 |
regional part of brain | 4.37e-09 | 53 |
cerebral cortex | 7.79e-09 | 25 |
pallium | 7.79e-09 | 25 |
neurectoderm | 1.16e-08 | 86 |
neural plate | 2.23e-08 | 82 |
presumptive neural plate | 2.23e-08 | 82 |
neocortex | 8.55e-08 | 20 |
brain | 1.13e-07 | 68 |
future brain | 1.13e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.60e-12 | 5 |
myotonic disease | 2.60e-12 | 5 |
muscle tissue disease | 2.60e-12 | 5 |
myopathy | 2.60e-12 | 5 |
muscular disease | 2.60e-12 | 5 |
myotonic dystrophy | 2.60e-12 | 5 |
disease of anatomical entity | 4.30e-07 | 39 |