FFCP PHASE1:Hg19::chr8:53853672..53853682,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC033145_5end | |||
|cluster_id=chr8:53853672..53853682,- | |||
|coexpression_cluster_id=C1408 | |||
|description=CAGE_peak_1_at_BC033145_5end | |||
|id=chr8:53853672..53853682,- | |||
|ontology_enrichment_celltype=CL:0000064!4.77e-20!3;CL:0005012!4.77e-20!3;CL:0000067!4.77e-20!3;CL:0002304!4.77e-20!3;CL:0002586!1.02e-19!3;CL:0000147!1.46e-15!14;CL:0000149!6.28e-15!4;CL:0000306!6.89e-15!4;CL:0002222!6.89e-15!4;CL:0002224!6.89e-15!4;CL:0000075!1.04e-13!27;CL:0000325!1.56e-11!39;CL:0000066!3.56e-08!254;CL:0000342!6.59e-08!1;CL:0002565!6.59e-08!1;CL:0000710!1.27e-07!20;CL:1001319!1.61e-07!1;CL:1000600!1.61e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.28e-84;3!CL:0000067;1.28e-84;3!CL:0005012;1.28e-84;3!CL:0002304;1.28e-84;3!CL:0002586;1.98e-38;3!CL:0000342;7.48e-30;1!CL:0002565;7.48e-30;1!CL:0000149;3.92e-29;4!CL:0000147;5.91e-19;14!CL:0000075;3.27e-17;27!CL:0000710;1.84e-13;20!CL:0000306;2.52e-08;4!CL:0002222;2.52e-08;4!CL:0002224;2.52e-08;4!CL:0002077;2.62e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.28e-84,3;CL:0000067,1.28e-84,3;CL:0005012,1.28e-84,3;CL:0002304,1.28e-84,3;CL:0002586,1.80e-38,3;CL:0000342,7.48e-30,1;CL:0002565,7.48e-30,1;CL:0000149,3.65e-29,4;CL:0000147,5.73e-19,14;CL:0000075,3.34e-17,27;CL:0000710,1.84e-13,20;CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4;CL:0002077,3.32e-08,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.51e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007625;1.31e-124;11!UBERON:0000488;1.33e-112;4!UBERON:0001778;1.28e-84;3!UBERON:0001775;1.28e-84;3!UBERON:0002203;2.17e-75;6!UBERON:0001768;2.17e-75;6!UBERON:0002200;2.17e-75;6!UBERON:0000019;1.97e-72;19!UBERON:0000047;1.97e-72;19!UBERON:0004088;1.97e-72;19!UBERON:0010230;1.97e-72;19!UBERON:0000970;7.67e-69;20!UBERON:0002104;1.36e-65;21!UBERON:0001456;1.36e-65;21!UBERON:0000020;6.11e-60;23!UBERON:0001032;1.82e-57;24!UBERON:0004456;1.82e-57;24!UBERON:0001801;1.78e-50;14!UBERON:0006876;1.65e-41;11!UBERON:0010371;2.97e-41;31!UBERON:0001781;1.98e-38;3!UBERON:0001782;1.98e-38;3!UBERON:0002506;7.48e-30;1!UBERON:0001769;7.48e-30;1!UBERON:0000966;1.52e-23;5!UBERON:0005388;1.52e-23;5!UBERON:0001802;1.52e-23;5!UBERON:0001444;1.09e-20;48!UBERON:0000033;3.60e-17;50!UBERON:0007811;6.61e-15;52!UBERON:0000153;1.63e-11;54!UBERON:0010077;2.52e-08;4!UBERON:0005389;2.52e-08;4!UBERON:0000484;2.52e-08;4!UBERON:0000965;2.52e-08;4!UBERON:0001803;2.52e-08;4!UBERON:0000483;5.81e-07;136 | |||
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|short_description=p1@BC033145 | |||
}} |
Latest revision as of 18:51, 31 July 2015
Short description: | p1@BC033145 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC033145_5end |
Coexpression cluster: | C1408_Iris_Ciliary_Lens_Retinal_Astrocyte_Smooth_testicular |
Association with transcript: | 0bp_to_BC033145_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.28e-84 | 3 |
ciliated epithelial cell | 1.28e-84 | 3 |
multi-ciliated epithelial cell | 1.28e-84 | 3 |
non-pigmented ciliary epithelial cell | 1.28e-84 | 3 |
retinal pigment epithelial cell | 1.80e-38 | 3 |
pigment cell (sensu Vertebrata) | 7.48e-30 | 1 |
iris pigment epithelial cell | 7.48e-30 | 1 |
visual pigment cell | 3.65e-29 | 4 |
pigment cell | 5.73e-19 | 14 |
columnar/cuboidal epithelial cell | 3.34e-17 | 27 |
neurecto-epithelial cell | 1.84e-13 | 20 |
crystallin accumulating cell | 2.61e-08 | 4 |
vertebrate lens cell | 2.61e-08 | 4 |
lens epithelial cell | 2.61e-08 | 4 |
ecto-epithelial cell | 3.32e-08 | 34 |