FFCP PHASE1:Hg19::chr9:44070749..44070754,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:44070749..44070754,+ | |||
|coexpression_cluster_id=C390 | |||
|description=CAGE_peak_at_chr9:44070749..44070754,+ | |description=CAGE_peak_at_chr9:44070749..44070754,+ | ||
|id=chr9:44070749..44070754,+ | |id=chr9:44070749..44070754,+ | ||
|ontology_enrichment_celltype=CL:0000047!5.37e-08!8 | |ontology_enrichment_celltype=CL:0000047!5.37e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.08e-33;2!CL:0000214;3.68e-23;3!CL:0000540;2.91e-12;6!CL:0000404;2.91e-12;6!CL:0002319;3.28e-10;25!CL:0000153;2.29e-08;9!CL:0000447;2.29e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.46e-33,8;CL:0000214,3.68e-23,3;CL:0000540,2.91e-12,6;CL:0000031,2.91e-12,6;CL:0000404,2.91e-12,6;CL:0002319,3.24e-10,25;CL:0000153,2.29e-08,9;CL:0000447,2.29e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.75e-18;1!UBERON:0005425;9.49e-18;1!CL:0000031;2.91e-12;6!UBERON:0003056;8.86e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.68e-23;3!UBERON:0007616;3.68e-23;3!UBERON:0002217;3.68e-23;3!UBERON:0002018;3.68e-23;3!UBERON:0002134;9.49e-18;1!UBERON:0000941;9.49e-18;1!UBERON:0001785;9.49e-18;1!UBERON:0002464;9.49e-18;1!UBERON:0004904;9.49e-18;1!UBERON:0001021;9.49e-18;1!UBERON:0005208;9.49e-18;1!UBERON:0004145;9.49e-18;1!UBERON:0005946;9.49e-18;1!UBERON:0005965;9.49e-18;1!UBERON:0002078;9.49e-18;1!UBERON:0003714;1.51e-09;2!UBERON:0005162;1.51e-09;2!UBERON:0000122;1.51e-09;2!UBERON:0002081;1.51e-09;2!UBERON:0002133;1.51e-09;2!UBERON:0004905;2.66e-09;8!UBERON:0000982;2.66e-09;8!UBERON:0004770;2.66e-09;8!UBERON:0004457;2.29e-08;9!UBERON:0000042;2.29e-08;9!UBERON:0003978;8.86e-07;3!UBERON:0004151;8.86e-07;3!UBERON:0000946;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.68e-23,3;UBERON:0007616,3.68e-23,3;UBERON:0002217,3.68e-23,3;UBERON:0002018,3.68e-23,3;UBERON:0002134,7.37e-18,1;UBERON:0005208,7.37e-18,1;UBERON:0005946,7.37e-18,1;UBERON:0005965,7.37e-18,1;UBERON:0002078,7.37e-18,1;UBERON:0000941,8.72e-18,1;UBERON:0001785,8.72e-18,1;UBERON:0002464,8.72e-18,1;UBERON:0004904,8.72e-18,1;UBERON:0001021,8.72e-18,1;UBERON:0003902,8.72e-18,1;UBERON:0005425,8.72e-18,1;UBERON:0002081,1.33e-09,2;UBERON:0002133,1.33e-09,2;UBERON:0010227,1.33e-09,2;UBERON:0003714,1.44e-09,2;UBERON:0005162,1.44e-09,2;UBERON:0000122,1.44e-09,2;UBERON:0004905,2.66e-09,8;UBERON:0000982,2.66e-09,8;UBERON:0004770,2.66e-09,8;UBERON:0003978,8.15e-07,3;UBERON:0009751,8.15e-07,3;UBERON:0004151,8.15e-07,3;UBERON:0000946,8.15e-07,3;UBERON:0002523,8.15e-07,3;UBERON:0005983,8.15e-07,3;UBERON:0004145,8.15e-07,3;UBERON:0002165,8.15e-07,3;UBERON:0002062,8.15e-07,3;UBERON:0007280,8.15e-07,3 | |||
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| ||
|short_description=p@chr9:44070749..44070754,+ | |short_description=p@chr9:44070749..44070754,+ | ||
}} | }} |
Latest revision as of 02:06, 1 August 2015
Short description: | p@chr9:44070749..44070754, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:44070749..44070754, + |
Coexpression cluster: | C390_Neurons_Synoviocyte_optic_Neural_heart_umbilical_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.46e-33 | 8 |
synovial cell | 3.68e-23 | 3 |
neuron | 2.91e-12 | 6 |
neuroblast | 2.91e-12 | 6 |
electrically signaling cell | 2.91e-12 | 6 |
neural cell | 3.24e-10 | 25 |
GAG secreting cell | 2.29e-08 | 9 |
carbohydrate secreting cell | 2.29e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.68e-23 | 3 |
layer of synovial tissue | 3.68e-23 | 3 |
synovial joint | 3.68e-23 | 3 |
synovial membrane of synovial joint | 3.68e-23 | 3 |
tricuspid valve | 7.37e-18 | 1 |
right atrium valve | 7.37e-18 | 1 |
outflow tract of atrium | 7.37e-18 | 1 |
outflow part of right atrium | 7.37e-18 | 1 |
right cardiac atrium | 7.37e-18 | 1 |
cranial nerve II | 8.72e-18 | 1 |
cranial nerve | 8.72e-18 | 1 |
nerve trunk | 8.72e-18 | 1 |
nerve connecting eye with brain | 8.72e-18 | 1 |
nerve | 8.72e-18 | 1 |
retinal neural layer | 8.72e-18 | 1 |
presumptive neural retina | 8.72e-18 | 1 |
cardiac atrium | 1.33e-09 | 2 |
atrioventricular valve | 1.33e-09 | 2 |
future cardiac atrium | 1.33e-09 | 2 |
neural tissue | 1.44e-09 | 2 |
multi cell component structure | 1.44e-09 | 2 |
neuron projection bundle | 1.44e-09 | 2 |
articulation | 2.66e-09 | 8 |
skeletal joint | 2.66e-09 | 8 |
articular system | 2.66e-09 | 8 |
valve | 8.15e-07 | 3 |
cardiac mesenchyme | 8.15e-07 | 3 |
cardiac chamber | 8.15e-07 | 3 |
cardial valve | 8.15e-07 | 3 |
tunica intima | 8.15e-07 | 3 |
heart layer | 8.15e-07 | 3 |
outflow tract | 8.15e-07 | 3 |
endocardium | 8.15e-07 | 3 |
endocardial cushion | 8.15e-07 | 3 |
presumptive endocardium | 8.15e-07 | 3 |