FFCP PHASE1:Mm9::chr2:129444232..129444274,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:129444232..129444274,+
|short_description=p@chr2:129444232..129444274,+
|description=CAGE_peak_at_chr2:129444232..129444274,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:129444232..129444274,+ | |||
|description=CAGE_peak_at_chr2:129444232..129444274,+ | |||
|id=chr2:129444232..129444274,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.18e-09,4;CL:0000766,5.18e-09,4;CL:0000234,5.18e-09,4;CL:0000576,5.18e-09,4;CL:0000235,5.18e-09,4;CL:0000864,5.18e-09,4;CL:0002009,5.18e-09,4;CL:0000040,5.18e-09,4;CL:0000559,5.18e-09,4;CL:0002092,2.52e-07,3;CL:0002540,2.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.11e-08!73;UBERON:0005743!5.11e-08!73;UBERON:0000955!6.39e-08!50;UBERON:0006238!6.39e-08!50;UBERON:0002346!6.87e-08!71;UBERON:0003075!6.87e-08!71;UBERON:0007284!6.87e-08!71;UBERON:0001049!1.17e-07!52;UBERON:0005068!1.17e-07!52;UBERON:0006241!1.17e-07!52;UBERON:0007135!1.17e-07!52;UBERON:0002020!1.64e-07!34;UBERON:0002616!1.79e-07!49;UBERON:0000073!3.09e-07!75;UBERON:0001016!3.09e-07!75;UBERON:0004121!5.71e-07!102;UBERON:0000924!5.71e-07!102;UBERON:0006601!5.71e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.14e-15,73;UBERON:0000073,5.11e-15,54;UBERON:0002020,9.30e-15,34;UBERON:0001016,1.29e-14,75;UBERON:0002021,2.00e-14,10;UBERON:0000411,2.00e-14,10;UBERON:0001950,2.00e-14,10;UBERON:0001049,4.13e-14,52;UBERON:0005068,4.13e-14,52;UBERON:0006241,4.13e-14,52;UBERON:0007135,4.13e-14,52;UBERON:0003528,1.11e-12,29;UBERON:0002791,1.11e-12,29;UBERON:0001893,1.11e-12,29;UBERON:0000955,3.80e-12,47;UBERON:0006238,3.80e-12,47;UBERON:0002619,2.53e-11,17;UBERON:0002616,3.80e-11,46;UBERON:0000956,1.93e-10,21;UBERON:0001869,1.93e-10,21;UBERON:0000203,1.93e-10,21;UBERON:0002346,2.63e-10,64;UBERON:0003075,2.63e-10,64;UBERON:0007284,2.63e-10,64;UBERON:0004121,6.32e-10,95;UBERON:0000924,6.32e-10,95;UBERON:0006601,6.32e-10,95;UBERON:0002780,1.41e-09,39;UBERON:0001890,1.41e-09,39;UBERON:0006240,1.41e-09,39;UBERON:0003080,3.13e-09,40;UBERON:0010371,2.65e-08,73;UBERON:0002371,2.75e-07,16;UBERON:0003056,8.74e-07,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,2.79824751251259,0.315462165358238,0.548457734422955,0,0.680346321208558,0.297872853602656,0,0.47997726838022,1.14704640533585,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,1.67412652294763,0,0,1.76469446409304,0.683045484958446,0.485510353031154,0.503587271902309,0.405507724878058,0.550640256485045,0,2.18025156380447,0,1.74986909166855,0.419959264876088,0,0,0,0,0,0.85960031981627,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,30.1466405289269,75.1538435550901,46.8916875864426,18.5752068521411,6.53171119046643,0.207379224616955,0.810035629990144,0,1.99955689082663,1.10434270475807,0.122490799214954,0.287536413054709,0,5.50579404996943,2.42605942361857,0.921639199537461,0.131886287730194,0.914876436024097,0,2.51264699101243,1.68828783009504,1.68078072554491,1.17851434189467,0.996601765593721,0,0,0,1.15945795480671,0,0,0,0,0,0.421333260395256,1.02258193546835,0.779358013808606,0,0,0,0,0,0,0.253359865475099,0,0,0.258937883647172,0.593768556259299,0.346970653532272,1.21786191324856,0.230615497256059,0.753613202763113,0.23517741427141,0.251333182659351,0.247194967734374,0.289198713839823,1.76922110389975,0.323533699894818,0.220841518460394,0,1.86391761218122,1.75668478206928,4.60782754989601,0.255457055208591,0.479260498023681,0,0.127070227073065,0.299581278809645,1.83000241127451,0.753926112677186,2.08589184230732,1.02286182932132,1.24672826735736,0.811206315338788,0.101839363850316,0.373220911830279,0,0.420883711772948,0.260240885925407,0,0,0.452114453507145,0.272145996605311,0.384341160854549,0.281105173679186,0.517406741478031,0,0,0,0.219195732427575,0,0,0.61734640922383,0.199034266818493,0,0,0.284163499395593,0,0,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0.268273401399619,0,0,0.32833492815819,0.0810688095458557,0,0.439100230582101,0.402619256281115,1.47202963994889,0.411618449517138,0,0,0.213288250535234,0,0.38660238396628,0,0,0.570676878337677,0,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0.379335801906163,0.114248512609729,0,0,0.581857461502877,0.210407459670956,0.189709611372772,0,0,0.246794327843601,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,1.20588579876208,0.50925170356284,0,0.972811360650212,1.09824565275233,7.18841032636773,1.11642284300551,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.714130922658041,0.195133647857799,0.315270288212382,0.8858587585951,0.159454768657487,0.983179888294428,0.690739927463582,0.433947175744535,52.7769493787453,18.4927932498361,0,0.551873492609465,0.80275294993896,0.234423373184406,0.491804836130026,0.252470927204373,0,0,0.430846795465598,0,0,0,0,0.584511715822624,0,1.92792789853084,0.283880170416537,0.178065603667255,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0.377210159511796,0.885905678642318,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,0,0.322928853391811,0.120625849856312,0.477489376012546,0.164140899745061,0.291480836629851,1.29797711407357,1.02522528478712,1.23832120777933,0.555583582109135,0.376736914009382,0.410082683163076,0.457556346413045,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0.496375471371293,0,0.516639293910924,0,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0,0.608175645870493,0.410843828659309,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.228620419965,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.187682475451182,0.549454872801795,0.428736758158132,2.50786052017682,4.51801474093653,4.60325236507177,8.02053718815155,3.09335728218638,1.37016503954128,3.0215755895588,0,2.70192721934532,1.81256963593682,4.65984280576638,0.207574695168353,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.187283014939765,0.192075457214608,0.114870937911227,0,0.231768651889711,0.578727661391115,0,0.294397840268795,0.685738504770831,0,0.476872379894642,0.145346416632329,0,0.169229215783353,0,0.789209134313529,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0.999242311751784,0,0.429742108096597,0,0.661774257358546,0.231867835620421 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| ||
|short_description=p@chr2:129444232..129444274,+ | |||
}} | }} |
Latest revision as of 01:04, 4 August 2015
Short description: | p@chr2:129444232..129444274, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:129444232..129444274, + |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.18e-09 | 4 |
myeloid leukocyte | 5.18e-09 | 4 |
phagocyte | 5.18e-09 | 4 |
monocyte | 5.18e-09 | 4 |
macrophage | 5.18e-09 | 4 |
tissue-resident macrophage | 5.18e-09 | 4 |
macrophage dendritic cell progenitor | 5.18e-09 | 4 |
monoblast | 5.18e-09 | 4 |
promonocyte | 5.18e-09 | 4 |
bone marrow cell | 2.52e-07 | 3 |
mesenchymal stem cell of the bone marrow | 2.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.14e-15 | 73 |
regional part of nervous system | 5.11e-15 | 54 |
gray matter | 9.30e-15 | 34 |
nervous system | 1.29e-14 | 75 |
occipital lobe | 2.00e-14 | 10 |
visual cortex | 2.00e-14 | 10 |
neocortex | 2.00e-14 | 10 |
neural tube | 4.13e-14 | 52 |
neural rod | 4.13e-14 | 52 |
future spinal cord | 4.13e-14 | 52 |
neural keel | 4.13e-14 | 52 |
brain grey matter | 1.11e-12 | 29 |
regional part of telencephalon | 1.11e-12 | 29 |
telencephalon | 1.11e-12 | 29 |
brain | 3.80e-12 | 47 |
future brain | 3.80e-12 | 47 |
regional part of cerebral cortex | 2.53e-11 | 17 |
regional part of brain | 3.80e-11 | 46 |
cerebral cortex | 1.93e-10 | 21 |
cerebral hemisphere | 1.93e-10 | 21 |
pallium | 1.93e-10 | 21 |
neurectoderm | 2.63e-10 | 64 |
neural plate | 2.63e-10 | 64 |
presumptive neural plate | 2.63e-10 | 64 |
ectoderm-derived structure | 6.32e-10 | 95 |
ectoderm | 6.32e-10 | 95 |
presumptive ectoderm | 6.32e-10 | 95 |
regional part of forebrain | 1.41e-09 | 39 |
forebrain | 1.41e-09 | 39 |
future forebrain | 1.41e-09 | 39 |
anterior neural tube | 3.13e-09 | 40 |
ecto-epithelium | 2.65e-08 | 73 |
bone marrow | 2.75e-07 | 16 |
pre-chordal neural plate | 8.74e-07 | 49 |