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FFCP PHASE1:Mm9::chr5:145528801..145528859,+: Difference between revisions

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{{FFCP|EntrezGene=100683|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-101bp_to_ENSMUST00000136379_5end|description=CAGE_peak_6_at_Trrap_5end|id=chr5:145528801..145528859,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.52e-14!63;UBERON:0000955!3.91e-13!50;UBERON:0006238!3.91e-13!50;UBERON:0002616!1.38e-12!49;UBERON:0001049!3.06e-11!52;UBERON:0005068!3.06e-11!52;UBERON:0006241!3.06e-11!52;UBERON:0007135!3.06e-11!52;UBERON:0007811!6.98e-11!86;UBERON:0003056!7.08e-11!49;UBERON:0003080!1.42e-10!40;UBERON:0000153!4.91e-10!94;UBERON:0002780!5.43e-10!39;UBERON:0001890!5.43e-10!39;UBERON:0006240!5.43e-10!39;UBERON:0002346!5.33e-09!71;UBERON:0003075!5.33e-09!71;UBERON:0007284!5.33e-09!71;UBERON:0002021!5.79e-08!10;UBERON:0000411!5.79e-08!10;UBERON:0001950!5.79e-08!10;UBERON:0002791!5.88e-08!29;UBERON:0003528!5.88e-08!29;UBERON:0001893!5.88e-08!29;UBERON:0002020!2.04e-07!34;UBERON:0001017!3.54e-07!73;UBERON:0005743!3.54e-07!73;UBERON:0004121!7.80e-07!102;UBERON:0000924!7.80e-07!102;UBERON:0006601!7.80e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.22e-21,54;UBERON:0000955,2.70e-21,47;UBERON:0006238,2.70e-21,47;UBERON:0002616,3.55e-20,46;UBERON:0001049,1.24e-19,52;UBERON:0005068,1.24e-19,52;UBERON:0006241,1.24e-19,52;UBERON:0007135,1.24e-19,52;UBERON:0002346,2.52e-19,64;UBERON:0003075,2.52e-19,64;UBERON:0007284,2.52e-19,64;UBERON:0004121,3.18e-18,95;UBERON:0000924,3.18e-18,95;UBERON:0006601,3.18e-18,95;UBERON:0001017,7.66e-18,73;UBERON:0003056,8.42e-18,49;UBERON:0001016,4.41e-17,75;UBERON:0003080,6.89e-17,40;UBERON:0010371,8.22e-17,73;UBERON:0002780,1.03e-15,39;UBERON:0001890,1.03e-15,39;UBERON:0006240,1.03e-15,39;UBERON:0002021,1.20e-15,10;UBERON:0000411,1.20e-15,10;UBERON:0001950,1.20e-15,10;UBERON:0003528,4.05e-14,29;UBERON:0002791,4.05e-14,29;UBERON:0001893,4.05e-14,29;UBERON:0002020,1.91e-12,34;UBERON:0000956,2.07e-12,21;UBERON:0001869,2.07e-12,21;UBERON:0000203,2.07e-12,21;UBERON:0002619,7.56e-12,17;UBERON:0010314,3.10e-11,92|phase1_expression=0.640595388419176,0,0,0.60492842261366,0,0,0.467225281191051,0.516493293766305,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.856003649656029,0.262261207256992,0,0,0,0.788655413395594,0.411343300817216,0,1.44573593256819,0.0992909512008853,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0,0.588231488031014,0.683045484958446,0.971020706062307,0.629484089877886,0.405507724878058,0.367093504323363,0,0,0.219686182734472,0,0,0,0.167782606057736,2.17608642603403,0.336093799142464,0,0.286533439938757,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0.988866362566974,0,0,0.384218305321555,0.103689612308478,1.62007125998029,0.210324961351382,0,0,0.367472397644862,0.191690942036473,0.919218786610021,1.10115880999389,2.42605942361857,2.15049146558741,0.923204014111357,3.84248103130121,0,0.558365998002762,2.8138130501584,0.45839474333043,0.883885756421003,0.996601765593721,1.1183966749518,0,0,0.289864488701678,0.860423876981386,0,0,0,0.448026887097336,0.983110940922263,0.511290967734173,0.519572009205738,0,0.422530259330042,0,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.376999773989026,1.23597483867187,0.433798070759735,0.884610551949874,0.647067399789637,0.441683036920787,0,0,8.78342391034641,9.21565509979202,0,0,0.599902730993408,0.127070227073065,9.43681028250383,12.8100168789215,9.04711335212624,9.56033761057521,14.5757810678288,6.64921742590592,8.92326946872667,0.203678727700633,0.124406970610093,0.252722758433675,2.94618598241064,0.130120442962704,0,0.180062129805349,1.50704817835715,0.680364991513279,1.2811372028485,0.468508622798644,2.32833033665114,0.646703978798527,0,0.879755620819744,0,1.11218899690239,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.196764231747404,0.154267112887378,0.697601834251224,0,0.233530684734339,0.329119699826961,0.32833492815819,0.56748166682099,1.31579988682799,0.439100230582101,0.671032093801859,7.78072809687271,5.45394445610208,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.49095073923223,0.885311519739602,0.885660887877613,0.941992367048249,0.493588655687202,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0,0,0.469380496577004,0.167506257441816,0.238043640886014,0.585400943573396,0.788175720530955,0.8858587585951,0.318909537314974,0.491589944147214,0.345369963731791,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:100683
|HGNC=
|MCL_coexpression_id=1
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|UniProt=
|association_with_transcript=-101bp_to_ENSMUST00000136379_5end
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|description=CAGE_peak_6_at_Trrap_5end
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.22e-21,54;UBERON:0000955,2.70e-21,47;UBERON:0006238,2.70e-21,47;UBERON:0002616,3.55e-20,46;UBERON:0001049,1.24e-19,52;UBERON:0005068,1.24e-19,52;UBERON:0006241,1.24e-19,52;UBERON:0007135,1.24e-19,52;UBERON:0002346,2.52e-19,64;UBERON:0003075,2.52e-19,64;UBERON:0007284,2.52e-19,64;UBERON:0004121,3.18e-18,95;UBERON:0000924,3.18e-18,95;UBERON:0006601,3.18e-18,95;UBERON:0001017,7.66e-18,73;UBERON:0003056,8.42e-18,49;UBERON:0001016,4.41e-17,75;UBERON:0003080,6.89e-17,40;UBERON:0010371,8.22e-17,73;UBERON:0002780,1.03e-15,39;UBERON:0001890,1.03e-15,39;UBERON:0006240,1.03e-15,39;UBERON:0002021,1.20e-15,10;UBERON:0000411,1.20e-15,10;UBERON:0001950,1.20e-15,10;UBERON:0003528,4.05e-14,29;UBERON:0002791,4.05e-14,29;UBERON:0001893,4.05e-14,29;UBERON:0002020,1.91e-12,34;UBERON:0000956,2.07e-12,21;UBERON:0001869,2.07e-12,21;UBERON:0000203,2.07e-12,21;UBERON:0002619,7.56e-12,17;UBERON:0010314,3.10e-11,92
|phase1_expression=0.640595388419176,0,0,0.60492842261366,0,0,0.467225281191051,0.516493293766305,0.140788722151667,0.234064526321993,0,0.0797721589953364,0.856003649656029,0.262261207256992,0,0,0,0.788655413395594,0.411343300817216,0,1.44573593256819,0.0992909512008853,0,0,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0,0.588231488031014,0.683045484958446,0.971020706062307,0.629484089877886,0.405507724878058,0.367093504323363,0,0,0.219686182734472,0,0,0,0.167782606057736,2.17608642603403,0.336093799142464,0,0.286533439938757,0,0.606949382578793,1.05798195854407,1.26766280701236,0,0,0,0.988866362566974,0,0,0.384218305321555,0.103689612308478,1.62007125998029,0.210324961351382,0,0,0.367472397644862,0.191690942036473,0.919218786610021,1.10115880999389,2.42605942361857,2.15049146558741,0.923204014111357,3.84248103130121,0,0.558365998002762,2.8138130501584,0.45839474333043,0.883885756421003,0.996601765593721,1.1183966749518,0,0,0.289864488701678,0.860423876981386,0,0,0,0.448026887097336,0.983110940922263,0.511290967734173,0.519572009205738,0,0.422530259330042,0,2.54805239706646,0,0.432982082022428,0.253359865475099,0,0.34255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.376999773989026,1.23597483867187,0.433798070759735,0.884610551949874,0.647067399789637,0.441683036920787,0,0,8.78342391034641,9.21565509979202,0,0,0.599902730993408,0.127070227073065,9.43681028250383,12.8100168789215,9.04711335212624,9.56033761057521,14.5757810678288,6.64921742590592,8.92326946872667,0.203678727700633,0.124406970610093,0.252722758433675,2.94618598241064,0.130120442962704,0,0.180062129805349,1.50704817835715,0.680364991513279,1.2811372028485,0.468508622798644,2.32833033665114,0.646703978798527,0,0.879755620819744,0,1.11218899690239,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.196764231747404,0.154267112887378,0.697601834251224,0,0.233530684734339,0.329119699826961,0.32833492815819,0.56748166682099,1.31579988682799,0.439100230582101,0.671032093801859,7.78072809687271,5.45394445610208,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0.898819408654221,0.216138049874694,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.49095073923223,0.885311519739602,0.885660887877613,0.941992367048249,0.493588655687202,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0.241177159752417,0.50925170356284,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0.369506380333209,0,0,0,0.469380496577004,0.167506257441816,0.238043640886014,0.585400943573396,0.788175720530955,0.8858587585951,0.318909537314974,0.491589944147214,0.345369963731791,1.73578870297814,0,0,0,0,4.81651769963376,2.81308047821288,0.163934945376675,1.51482556322624,0,0,0,0,0,0,0,0,0,3.85585579706168,0.425820255624806,0.35613120733451,1.14020871547503,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,0.18006109403131,0.517434735131018,1.07168517515796,1.24138163549592,0.535106452806212,0.658196082408484,0.608929898229199,0.469343416127421,0.847328283455281,0.220528398054962,1.31909002353184,0.968786560175433,0.422190474497091,0.716234064018819,0,0,2.59595422814714,0.341741761595705,0,0.370389054739423,0.376736914009382,0.27338845544205,0.457556346413045,0.169978429993855,0,0.276399947608848,0,0.474503990371703,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.661227645802687,0.26175594198403,0.777689839750757,1.24267862617385,0.56369293868419,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.651021924219751,0.629156066554265,0.241584120826006,0.288030006257865,0.632022241256357,0,0.308132871494482,0,0.358053391334963,0.39736270956253,0.841368146639782,0.590758108698309,0.403865799792591,0.914481679859998,0.403304740547362,0.779663045918019,0.288635524920988,0.818138315270983,0.453460767230423,0.221985953374065,0.0897138566094757,0,0.386379188064381,1.12609485270709,0.183151624267265,0.857473516316263,0.501572104035363,11.8597886949584,6.90487854760765,9.73922372846974,4.29632955859219,7.53590771747707,9.06472676867641,6.07520250208625,9.90706647093285,11.7817026335893,11.39072685854,0.518936737920883,0,1.53660245178721,0.486213434136588,1.46729213839588,0.551530525350042,0.888986911206461,0.824140228955577,0.962757628775446,1.01078884705519,2.02783439912192,0.943131706930381,0.936415074698824,1.34452820050225,0.574354689556133,0.952587382566147,0.811190281613988,0.964546102318525,0.412085900803307,1.17759136107518,1.02860775715625,1.24233064311536,0.715308569841963,1.0174249164263,0.658765662907314,0.761531471025089,0.73171189149109,1.05227884575137,0.679020569229309,2.24456908663095,0.949080144993393,0.788035859004508,0.818462086339379,0.464810523557898,0.578719832943424,2.74791635731741,0.233931608445408,0.859484216193193,1.14772999241306,0.661774257358546,0.463735671240843
|short_description=p6@Trrap
}}

Revision as of 01:07, 4 August 2015

Short description:p6@Trrap
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Trrap_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -101bp_to_ENSMUST00000136379_5end
EntrezGene:100683
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Trrap

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F19.05
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F214.58
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B28.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.22e-2154
brain2.70e-2147
future brain2.70e-2147
regional part of brain3.55e-2046
neural tube1.24e-1952
neural rod1.24e-1952
future spinal cord1.24e-1952
neural keel1.24e-1952
neurectoderm2.52e-1964
neural plate2.52e-1964
presumptive neural plate2.52e-1964
ectoderm-derived structure3.18e-1895
ectoderm3.18e-1895
presumptive ectoderm3.18e-1895
central nervous system7.66e-1873
pre-chordal neural plate8.42e-1849
nervous system4.41e-1775
anterior neural tube6.89e-1740
ecto-epithelium8.22e-1773
regional part of forebrain1.03e-1539
forebrain1.03e-1539
future forebrain1.03e-1539
occipital lobe1.20e-1510
visual cortex1.20e-1510
neocortex1.20e-1510
brain grey matter4.05e-1429
regional part of telencephalon4.05e-1429
telencephalon4.05e-1429
gray matter1.91e-1234
cerebral cortex2.07e-1221
cerebral hemisphere2.07e-1221
pallium2.07e-1221
regional part of cerebral cortex7.56e-1217
structure with developmental contribution from neural crest3.10e-1192
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