FFCP PHASE1:Mm9::chr14:60262375..60262378,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=145 | |MCL_coexpression_id=145 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:60262375..60262378,- | |||
|description=CAGE_peak_at_chr14:60262375..60262378,- | |description=CAGE_peak_at_chr14:60262375..60262378,- | ||
|id=chr14:60262375..60262378,- | |id=chr14:60262375..60262378,- | ||
|ontology_enrichment_celltype=CL:0000117!1.42e-10!23;CL:0000337!1.42e-10!23;CL:0000540!5.42e-08!33;CL:0000047!5.42e-08!33;CL:0000031!5.42e-08!33;CL:0000404!5.42e-08!33 | |ontology_enrichment_celltype=CL:0000117!1.42e-10!23;CL:0000337!1.42e-10!23;CL:0000540!5.42e-08!33;CL:0000047!5.42e-08!33;CL:0000031!5.42e-08!33;CL:0000404!5.42e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.73e-17,23;CL:0000337,9.73e-17,23;CL:0002612,2.57e-11,3;CL:0000540,4.69e-11,33;CL:0000047,4.69e-11,33;CL:0000031,4.69e-11,33;CL:0000404,4.69e-11,33;CL:0000393,4.79e-09,39;CL:0000211,4.79e-09,39;CL:0002319,5.09e-08,43;CL:0000221,8.60e-08,44;CL:0000133,8.60e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.59e-18!63;UBERON:0003056!7.08e-16!49;UBERON:0002346!8.35e-16!71;UBERON:0003075!8.35e-16!71;UBERON:0007284!8.35e-16!71;UBERON:0001049!1.06e-15!52;UBERON:0005068!1.06e-15!52;UBERON:0006241!1.06e-15!52;UBERON:0007135!1.06e-15!52;UBERON:0001017!1.62e-15!73;UBERON:0005743!1.62e-15!73;UBERON:0000955!2.78e-15!50;UBERON:0006238!2.78e-15!50;UBERON:0002616!9.75e-15!49;UBERON:0000073!1.20e-14!75;UBERON:0001016!1.20e-14!75;UBERON:0004121!1.59e-14!102;UBERON:0000924!1.59e-14!102;UBERON:0006601!1.59e-14!102;UBERON:0003080!1.87e-13!40;UBERON:0002780!9.64e-13!39;UBERON:0001890!9.64e-13!39;UBERON:0006240!9.64e-13!39;UBERON:0002020!3.68e-12!34;UBERON:0002791!4.41e-11!29;UBERON:0003528!4.41e-11!29;UBERON:0001893!4.41e-11!29;UBERON:0007811!5.34e-10!86;UBERON:0000025!7.61e-10!114;UBERON:0004111!2.34e-09!122;UBERON:0000153!1.99e-08!94;UBERON:0000956!5.82e-08!21;UBERON:0001869!5.82e-08!21;UBERON:0000203!5.82e-08!21 | |ontology_enrichment_uberon=UBERON:0000033!4.59e-18!63;UBERON:0003056!7.08e-16!49;UBERON:0002346!8.35e-16!71;UBERON:0003075!8.35e-16!71;UBERON:0007284!8.35e-16!71;UBERON:0001049!1.06e-15!52;UBERON:0005068!1.06e-15!52;UBERON:0006241!1.06e-15!52;UBERON:0007135!1.06e-15!52;UBERON:0001017!1.62e-15!73;UBERON:0005743!1.62e-15!73;UBERON:0000955!2.78e-15!50;UBERON:0006238!2.78e-15!50;UBERON:0002616!9.75e-15!49;UBERON:0000073!1.20e-14!75;UBERON:0001016!1.20e-14!75;UBERON:0004121!1.59e-14!102;UBERON:0000924!1.59e-14!102;UBERON:0006601!1.59e-14!102;UBERON:0003080!1.87e-13!40;UBERON:0002780!9.64e-13!39;UBERON:0001890!9.64e-13!39;UBERON:0006240!9.64e-13!39;UBERON:0002020!3.68e-12!34;UBERON:0002791!4.41e-11!29;UBERON:0003528!4.41e-11!29;UBERON:0001893!4.41e-11!29;UBERON:0007811!5.34e-10!86;UBERON:0000025!7.61e-10!114;UBERON:0004111!2.34e-09!122;UBERON:0000153!1.99e-08!94;UBERON:0000956!5.82e-08!21;UBERON:0001869!5.82e-08!21;UBERON:0000203!5.82e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.86e-17,54;UBERON:0001049,5.94e-16,52;UBERON:0005068,5.94e-16,52;UBERON:0006241,5.94e-16,52;UBERON:0007135,5.94e-16,52;UBERON:0001017,1.91e-15,73;UBERON:0001016,6.23e-15,75;UBERON:0002020,7.70e-15,34;UBERON:0002346,4.31e-14,64;UBERON:0003075,4.31e-14,64;UBERON:0007284,4.31e-14,64;UBERON:0004121,2.17e-12,95;UBERON:0000924,2.17e-12,95;UBERON:0006601,2.17e-12,95;UBERON:0010371,6.34e-12,73;UBERON:0002257,2.57e-11,3;UBERON:0002420,1.01e-10,8;UBERON:0007245,1.01e-10,8;UBERON:0010009,1.01e-10,8;UBERON:0010011,1.01e-10,8;UBERON:0000454,1.01e-10,8;UBERON:0003528,3.28e-10,29;UBERON:0002791,3.28e-10,29;UBERON:0001893,3.28e-10,29;UBERON:0003080,4.03e-10,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,7.92e-10,47;UBERON:0006238,7.92e-10,47;UBERON:0002240,8.15e-10,6;UBERON:0005174,8.15e-10,6;UBERON:0001137,8.15e-10,6;UBERON:0000025,1.71e-09,114;UBERON:0003056,2.15e-09,49;UBERON:0002780,9.35e-09,39;UBERON:0001890,9.35e-09,39;UBERON:0006240,9.35e-09,39;UBERON:0010314,9.71e-09,92;UBERON:0004111,1.32e-08,122;UBERON:0002950,4.31e-08,4;UBERON:0001891,4.31e-08,4;UBERON:0009616,4.31e-08,4;UBERON:0010286,4.31e-08,4;UBERON:0003076,3.51e-07,12;UBERON:0003057,3.51e-07,12;UBERON:0001948,5.89e-07,5;UBERON:0002315,5.89e-07,5;UBERON:0000369,8.53e-07,5;UBERON:0002435,8.53e-07,5;UBERON:0000204,8.53e-07,5;UBERON:0010082,8.53e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,1.08004750665353,0.420649922702764,0,0,0.489963196859816,0.670918297127655,0,0,2.17068474744819,2.91852413186863,1.18697658957174,2.47016637726506,0.52091337055676,2.79182999001381,0,1.06958773443767,3.53554302568401,1.13897344639282,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,0,1.13088916901578,0.869121600961382,0.767146371990992,0.62336413367868,1.29793010454206,0.203678727700633,0,0,0,0,0.229902104433473,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.468508622798644,1.55222022443409,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0.210289948564127,0.92614151141356,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,1.29708181420028,1.09824565275233,7.18841032636773,1.11642284300551,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,1.12385412991454,0.937693492737625,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.71868654031819,1.03111909406213,0.685082519770642,0.755393897389701,0,1.80128481289688,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0.476872379894642,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,1.24905288968973,0,0.214871054048298,0,0.220591419119515,0 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|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,1.08004750665353,0.420649922702764,0,0,0.489963196859816,0.670918297127655,0,0,2.17068474744819,2.91852413186863,1.18697658957174,2.47016637726506,0.52091337055676,2.79182999001381,0,1.06958773443767,3.53554302568401,1.13897344639282,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,1.04853447583376,0,1.13088916901578,0.869121600961382,0.767146371990992,0.62336413367868,1.29793010454206,0.203678727700633,0,0,0,0,0.229902104433473,0.180062129805349,0.60281927134286,0.204109497453984,0.2562274405697,0.468508622798644,1.55222022443409,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0.232533944750408,0,0,0.16455984991348,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0.210289948564127,0.92614151141356,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,1.29708181420028,1.09824565275233,7.18841032636773,1.11642284300551,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,1.12385412991454,0.937693492737625,0,0,0,0,0,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0.352071715937262,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.71868654031819,1.03111909406213,0.685082519770642,0.755393897389701,0,1.80128481289688,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0.476872379894642,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,1.24905288968973,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr14:60262375..60262378,- | |short_description=p@chr14:60262375..60262378,- | ||
}} | }} |
Latest revision as of 13:58, 4 August 2015
Short description: | p@chr14:60262375..60262378, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:60262375..60262378, - |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.73e-17 | 23 |
neuroblast (sensu Vertebrata) | 9.73e-17 | 23 |
neuron of the ventral spinal cord | 2.57e-11 | 3 |
neuron | 4.69e-11 | 33 |
neuronal stem cell | 4.69e-11 | 33 |
neuroblast | 4.69e-11 | 33 |
electrically signaling cell | 4.69e-11 | 33 |
electrically responsive cell | 4.79e-09 | 39 |
electrically active cell | 4.79e-09 | 39 |
neural cell | 5.09e-08 | 43 |
ectodermal cell | 8.60e-08 | 44 |
neurectodermal cell | 8.60e-08 | 44 |