FFCP PHASE1:Mm9::chr12:110798797..110798817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:110798797..110798817,+ | |||
|description=CAGE_peak_at_chr12:110798797..110798817,+ | |description=CAGE_peak_at_chr12:110798797..110798817,+ | ||
|id=chr12:110798797..110798817,+ | |id=chr12:110798797..110798817,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.92e-18!71;UBERON:0003075!9.92e-18!71;UBERON:0007284!9.92e-18!71;UBERON:0001049!1.57e-17!52;UBERON:0005068!1.57e-17!52;UBERON:0006241!1.57e-17!52;UBERON:0007135!1.57e-17!52;UBERON:0000955!3.71e-17!50;UBERON:0006238!3.71e-17!50;UBERON:0002616!1.72e-16!49;UBERON:0000033!4.81e-16!63;UBERON:0001017!9.09e-16!73;UBERON:0005743!9.09e-16!73;UBERON:0000073!8.40e-15!75;UBERON:0001016!8.40e-15!75;UBERON:0004121!2.75e-14!102;UBERON:0000924!2.75e-14!102;UBERON:0006601!2.75e-14!102;UBERON:0003080!2.17e-13!40;UBERON:0003056!2.54e-13!49;UBERON:0002780!1.07e-12!39;UBERON:0001890!1.07e-12!39;UBERON:0006240!1.07e-12!39;UBERON:0002020!3.17e-12!34;UBERON:0002791!1.20e-09!29;UBERON:0003528!1.20e-09!29;UBERON:0001893!1.20e-09!29;UBERON:0002021!2.06e-09!10;UBERON:0000411!2.06e-09!10;UBERON:0001950!2.06e-09!10;UBERON:0007811!7.04e-08!86;UBERON:0000153!3.63e-07!94;UBERON:0002619!8.69e-07!17 | |ontology_enrichment_uberon=UBERON:0002346!9.92e-18!71;UBERON:0003075!9.92e-18!71;UBERON:0007284!9.92e-18!71;UBERON:0001049!1.57e-17!52;UBERON:0005068!1.57e-17!52;UBERON:0006241!1.57e-17!52;UBERON:0007135!1.57e-17!52;UBERON:0000955!3.71e-17!50;UBERON:0006238!3.71e-17!50;UBERON:0002616!1.72e-16!49;UBERON:0000033!4.81e-16!63;UBERON:0001017!9.09e-16!73;UBERON:0005743!9.09e-16!73;UBERON:0000073!8.40e-15!75;UBERON:0001016!8.40e-15!75;UBERON:0004121!2.75e-14!102;UBERON:0000924!2.75e-14!102;UBERON:0006601!2.75e-14!102;UBERON:0003080!2.17e-13!40;UBERON:0003056!2.54e-13!49;UBERON:0002780!1.07e-12!39;UBERON:0001890!1.07e-12!39;UBERON:0006240!1.07e-12!39;UBERON:0002020!3.17e-12!34;UBERON:0002791!1.20e-09!29;UBERON:0003528!1.20e-09!29;UBERON:0001893!1.20e-09!29;UBERON:0002021!2.06e-09!10;UBERON:0000411!2.06e-09!10;UBERON:0001950!2.06e-09!10;UBERON:0007811!7.04e-08!86;UBERON:0000153!3.63e-07!94;UBERON:0002619!8.69e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.67e-24,54;UBERON:0001049,4.86e-21,52;UBERON:0005068,4.86e-21,52;UBERON:0006241,4.86e-21,52;UBERON:0007135,4.86e-21,52;UBERON:0000955,1.13e-18,47;UBERON:0006238,1.13e-18,47;UBERON:0002020,3.11e-18,34;UBERON:0001017,4.82e-18,73;UBERON:0002616,1.48e-17,46;UBERON:0002021,1.82e-17,10;UBERON:0000411,1.82e-17,10;UBERON:0001950,1.82e-17,10;UBERON:0001016,2.56e-17,75;UBERON:0002346,6.67e-17,64;UBERON:0003075,6.67e-17,64;UBERON:0007284,6.67e-17,64;UBERON:0003080,4.19e-16,40;UBERON:0003528,7.50e-16,29;UBERON:0002791,7.50e-16,29;UBERON:0001893,7.50e-16,29;UBERON:0002780,6.42e-15,39;UBERON:0001890,6.42e-15,39;UBERON:0006240,6.42e-15,39;UBERON:0010371,8.42e-14,73;UBERON:0003056,2.61e-13,49;UBERON:0002619,3.78e-13,17;UBERON:0004121,8.99e-13,95;UBERON:0000924,8.99e-13,95;UBERON:0006601,8.99e-13,95;UBERON:0000956,8.12e-12,21;UBERON:0001869,8.12e-12,21;UBERON:0000203,8.12e-12,21;UBERON:0010314,4.17e-10,92 | |||
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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.414758449233911,0,0,0.285650984403804,0.883474163806454,0,0.287536413054709,0,3.30347642998166,8.68273898979276,11.981309593987,0.791317726381163,1.46380229763855,0,0.837548997004143,3.37657566019008,11.4598685832608,8.2496003932627,4.41352210477219,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,1.21786191324856,0,0.904335843315735,0.705532242814229,0,0.247194967734374,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,4.6435098215495,5.03250663100489,3.39266750704734,2.25971616249959,5.37002460393694,2.90903262383384,5.51620294430376,0.101839363850316,0,0,0,0.130120442962704,0,0,0.452114453507145,0.95251098811859,0.512454881139399,0.187403449119458,2.06962696591213,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0.938104239924385,0.180062061461015,0,0,0.617068451549513,0.697601834251224,0,0.116765342367169,0.493679549740441,0.32833492815819,0,0,0,0,1.89260953707715,2.26390147234426,0,0,0.426576501070468,0,0,0,0.22237804384487,0.190225626112559,0,0.494096864172033,0,0.397912944082302,0.19496408711912,0,0.648414149624083,0,0,0.456994050438915,0,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,12.9391385874619,0,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0.938760993154008,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,1.60550589987792,3.98519734413491,0,0,0.315508219416257,0,0.861693590931196,0,0,0,0.404810701674894,0.876767573733936,0,2.57057053137446,0,0.178065603667255,0.488660878060728,0,0,0,0,0.188605079755898,0,1.22974059177571,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.36175842301515,0,0.388076051348264,0.428674070063185,0.354680467284547,0.713475270408282,0.658196082408484,0.608929898229199,0,0,0,0,0.645857706783622,0.180938774784468,0.119372344003136,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0,0.218362563746178,0.539457385539283,0,0,0,0,0,0,0.165458490457098,0,0,0.337912250981556,0.469428954583016,0.39061315453185,0,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,10.7302850097243,6.90487854760765,7.44764167471216,7.21783365843488,4.7955776383945,9.82012066606611,8.10027000278167,8.55610286126019,2.26571204492102,3.10656187051092,0,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,0,0.222246727801615,1.03017528619447,0.320919209591815,0,1.01391719956096,0.754505365544305,0.936415074698824,0.832326981263301,0.459483751644906,0.476293691283074,1.39061191133827,1.73618298417335,1.64834360321323,1.17759136107518,4.80016953339582,3.72699192934609,2.14592570952589,0.581385666529314,1.03520318456864,1.4384483341585,2.74391959309159,3.6829759601298,1.7654534799962,1.68342681497322,0.355905054372522,1.0835493061312,1.22769312950907,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,1.53030665655075,0,0 | ||
|short_description=p@chr12:110798797..110798817,+ | |short_description=p@chr12:110798797..110798817,+ | ||
}} | }} |
Latest revision as of 17:11, 4 August 2015
Short description: | p@chr12:110798797..110798817, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:110798797..110798817, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.67e-24 | 54 |
neural tube | 4.86e-21 | 52 |
neural rod | 4.86e-21 | 52 |
future spinal cord | 4.86e-21 | 52 |
neural keel | 4.86e-21 | 52 |
brain | 1.13e-18 | 47 |
future brain | 1.13e-18 | 47 |
gray matter | 3.11e-18 | 34 |
central nervous system | 4.82e-18 | 73 |
regional part of brain | 1.48e-17 | 46 |
occipital lobe | 1.82e-17 | 10 |
visual cortex | 1.82e-17 | 10 |
neocortex | 1.82e-17 | 10 |
nervous system | 2.56e-17 | 75 |
neurectoderm | 6.67e-17 | 64 |
neural plate | 6.67e-17 | 64 |
presumptive neural plate | 6.67e-17 | 64 |
anterior neural tube | 4.19e-16 | 40 |
brain grey matter | 7.50e-16 | 29 |
regional part of telencephalon | 7.50e-16 | 29 |
telencephalon | 7.50e-16 | 29 |
regional part of forebrain | 6.42e-15 | 39 |
forebrain | 6.42e-15 | 39 |
future forebrain | 6.42e-15 | 39 |
ecto-epithelium | 8.42e-14 | 73 |
pre-chordal neural plate | 2.61e-13 | 49 |
regional part of cerebral cortex | 3.78e-13 | 17 |
ectoderm-derived structure | 8.99e-13 | 95 |
ectoderm | 8.99e-13 | 95 |
presumptive ectoderm | 8.99e-13 | 95 |
cerebral cortex | 8.12e-12 | 21 |
cerebral hemisphere | 8.12e-12 | 21 |
pallium | 8.12e-12 | 21 |
structure with developmental contribution from neural crest | 4.17e-10 | 92 |