FFCP PHASE1:Mm9::chr11:102994617..102994646,+: Difference between revisions
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{{FFCP|EntrezGene=71059|HGNC=|MCL_coexpression_id=60|UniProt=Q3TVI4|association_with_transcript=0bp_to_ENSMUST00000107037_5end|description=CAGE_peak_2_at_Hexim2_5end|id=chr11:102994617..102994646,+|ontology_enrichment_celltype=CL:0000117!1.40e-14!23;CL:0000337!1.40e-14!23;CL:0000540!4.13e-12!33;CL:0000047!4.13e-12!33;CL:0000031!4.13e-12!33;CL:0000404!4.13e-12!33;CL:0000221!1.21e-09!44;CL:0000133!1.21e-09!44;CL:0002319!2.12e-09!43;CL:0000393!2.45e-08!39;CL:0000211!2.45e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.33e-15,23;CL:0000337,6.33e-15,23;CL:0000540,2.16e-12,33;CL:0000047,2.16e-12,33;CL:0000031,2.16e-12,33;CL:0000404,2.16e-12,33;CL:0000221,1.79e-09,44;CL:0000133,1.79e-09,44;CL:0002319,3.17e-09,43;CL:0000393,1.44e-08,39;CL:0000211,1.44e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.96e-26!73;UBERON:0005743!4.96e-26!73;UBERON:0000073!2.67e-24!75;UBERON:0001016!2.67e-24!75;UBERON:0001049!2.57e-22!52;UBERON:0005068!2.57e-22!52;UBERON:0006241!2.57e-22!52;UBERON:0007135!2.57e-22!52;UBERON:0000033!7.15e-22!63;UBERON:0000955!6.15e-21!50;UBERON:0006238!6.15e-21!50;UBERON:0002616!2.60e-20!49;UBERON:0004121!4.37e-20!102;UBERON:0000924!4.37e-20!102;UBERON:0006601!4.37e-20!102;UBERON:0002346!5.98e-20!71;UBERON:0003075!5.98e-20!71;UBERON:0007284!5.98e-20!71;UBERON:0003056!6.92e-20!49;UBERON:0007811!1.37e-19!86;UBERON:0000153!2.35e-19!94;UBERON:0003080!3.78e-18!40;UBERON:0002780!1.89e-17!39;UBERON:0001890!1.89e-17!39;UBERON:0006240!1.89e-17!39;UBERON:0002020!1.95e-17!34;UBERON:0002791!3.02e-14!29;UBERON:0003528!3.02e-14!29;UBERON:0001893!3.02e-14!29;UBERON:0000956!1.30e-09!21;UBERON:0001869!1.30e-09!21;UBERON:0000203!1.30e-09!21;UBERON:0002619!1.50e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-26,73;UBERON:0001016,2.17e-24,75;UBERON:0002346,4.90e-24,64;UBERON:0003075,4.90e-24,64;UBERON:0007284,4.90e-24,64;UBERON:0000073,7.20e-24,54;UBERON:0004121,1.92e-23,95;UBERON:0000924,1.92e-23,95;UBERON:0006601,1.92e-23,95;UBERON:0001049,1.77e-22,52;UBERON:0005068,1.77e-22,52;UBERON:0006241,1.77e-22,52;UBERON:0007135,1.77e-22,52;UBERON:0003056,3.72e-20,49;UBERON:0010371,6.05e-20,73;UBERON:0000955,2.50e-19,47;UBERON:0006238,2.50e-19,47;UBERON:0002616,1.06e-18,46;UBERON:0003080,2.31e-18,40;UBERON:0002780,1.20e-17,39;UBERON:0001890,1.20e-17,39;UBERON:0006240,1.20e-17,39;UBERON:0002020,1.28e-17,34;UBERON:0003528,2.36e-14,29;UBERON:0002791,2.36e-14,29;UBERON:0001893,2.36e-14,29;UBERON:0010314,3.75e-10,92;UBERON:0000956,1.29e-09,21;UBERON:0001869,1.29e-09,21;UBERON:0000203,1.29e-09,21;UBERON:0002619,1.66e-07,17|phase1_expression=1.12104192973356,0.697950815278722,1.81999695755814,1.51232105653415,1.00179145989269,0.33575854382378,0.233612640595526,1.80772652818207,0.281577444303333,0.936258105287974,0.34243593645101,0.957265907944037,1.54080656938085,1.31130603628496,0.333109761815663,0.607425802169478,1.39912375625629,0.630924330716475,0.548457734422955,0,3.48677489619386,1.58865521921416,2.35079810225042,1.43993180514066,0.45881856213434,1.14846392823004,0.86152399231815,1.29282739611533,2.47030445293286,1.26015064879965,1.10865255327652,0,2.46025915033828,0,0.577703239502549,0.498703936075477,1.02084678131185,0.418531630736908,1.5626706890476,0.523523743973798,1.17646297606203,0.683045484958446,1.94204141212461,0.881277725829041,1.21652317463417,1.10128051297009,0.782391344348039,1.09012578190223,0.878744730937887,1.55543919259427,2.2397827460058,2.87505128729943,1.17447824240415,2.17608642603403,0.336093799142464,0,1.14613375975503,0.515672092277442,6.27181028664753,10.5798195854407,5.70448263155561,0.677689064138264,0,1.3498495759221,1.97773272513395,2.1314403448383,2.09720077362883,2.68952813725088,4.87341177849845,7.69533848490637,6.09942387919008,7.7125765789027,7.06779331045163,7.22695715368229,7.09256485534949,4.5960939330501,7.70811166995721,4.72443150915195,4.91540906419979,9.23204014111357,9.14876436024097,9.89735404057844,4.4669279840221,6.75315132038016,5.80633341551878,8.54422897873636,6.26435395516053,7.08317894136142,0.530083353332288,0.831287161174641,1.44932244350839,0.860423876981386,0,0.539703191637817,1.94932925234301,0.896053774194671,1.26399978118577,1.1930122580464,1.55871602761721,1.41335829804136,2.67602497575693,0,2.54805239706646,0,0.432982082022428,0,0,1.37020655662872,0.776813650941515,0.445326417194474,1.38788261412909,1.21786191324856,0.922461989024234,1.20578112442098,1.29347577849275,1.13099932196708,2.22475470960936,1.01219549843938,1.76922110389975,1.13236794963186,0.662524555381181,0.484875253135222,0,4.9772735491963,5.86450779077674,0.255457055208591,0.359445373517761,0,0.635351135365324,9.13722900369418,5.49000723382352,6.53402630986895,5.04090528557602,5.11430914660661,6.2336413367868,7.62533936418461,2.03678727700633,0.995255764880744,1.51633655060205,1.68353484709179,2.47228841629137,2.75882525320168,2.16074555766419,2.26057226753573,2.9255694635071,2.562274405697,3.5606655332697,3.10444044886819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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:71059 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TVI4 | |||
|association_with_transcript=0bp_to_ENSMUST00000107037_5end | |||
|cluster_id=chr11:102994617..102994646,+ | |||
|description=CAGE_peak_2_at_Hexim2_5end | |||
|id=chr11:102994617..102994646,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.40e-14!23;CL:0000337!1.40e-14!23;CL:0000540!4.13e-12!33;CL:0000047!4.13e-12!33;CL:0000031!4.13e-12!33;CL:0000404!4.13e-12!33;CL:0000221!1.21e-09!44;CL:0000133!1.21e-09!44;CL:0002319!2.12e-09!43;CL:0000393!2.45e-08!39;CL:0000211!2.45e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.33e-15,23;CL:0000337,6.33e-15,23;CL:0000540,2.16e-12,33;CL:0000047,2.16e-12,33;CL:0000031,2.16e-12,33;CL:0000404,2.16e-12,33;CL:0000221,1.79e-09,44;CL:0000133,1.79e-09,44;CL:0002319,3.17e-09,43;CL:0000393,1.44e-08,39;CL:0000211,1.44e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.96e-26!73;UBERON:0005743!4.96e-26!73;UBERON:0000073!2.67e-24!75;UBERON:0001016!2.67e-24!75;UBERON:0001049!2.57e-22!52;UBERON:0005068!2.57e-22!52;UBERON:0006241!2.57e-22!52;UBERON:0007135!2.57e-22!52;UBERON:0000033!7.15e-22!63;UBERON:0000955!6.15e-21!50;UBERON:0006238!6.15e-21!50;UBERON:0002616!2.60e-20!49;UBERON:0004121!4.37e-20!102;UBERON:0000924!4.37e-20!102;UBERON:0006601!4.37e-20!102;UBERON:0002346!5.98e-20!71;UBERON:0003075!5.98e-20!71;UBERON:0007284!5.98e-20!71;UBERON:0003056!6.92e-20!49;UBERON:0007811!1.37e-19!86;UBERON:0000153!2.35e-19!94;UBERON:0003080!3.78e-18!40;UBERON:0002780!1.89e-17!39;UBERON:0001890!1.89e-17!39;UBERON:0006240!1.89e-17!39;UBERON:0002020!1.95e-17!34;UBERON:0002791!3.02e-14!29;UBERON:0003528!3.02e-14!29;UBERON:0001893!3.02e-14!29;UBERON:0000956!1.30e-09!21;UBERON:0001869!1.30e-09!21;UBERON:0000203!1.30e-09!21;UBERON:0002619!1.50e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-26,73;UBERON:0001016,2.17e-24,75;UBERON:0002346,4.90e-24,64;UBERON:0003075,4.90e-24,64;UBERON:0007284,4.90e-24,64;UBERON:0000073,7.20e-24,54;UBERON:0004121,1.92e-23,95;UBERON:0000924,1.92e-23,95;UBERON:0006601,1.92e-23,95;UBERON:0001049,1.77e-22,52;UBERON:0005068,1.77e-22,52;UBERON:0006241,1.77e-22,52;UBERON:0007135,1.77e-22,52;UBERON:0003056,3.72e-20,49;UBERON:0010371,6.05e-20,73;UBERON:0000955,2.50e-19,47;UBERON:0006238,2.50e-19,47;UBERON:0002616,1.06e-18,46;UBERON:0003080,2.31e-18,40;UBERON:0002780,1.20e-17,39;UBERON:0001890,1.20e-17,39;UBERON:0006240,1.20e-17,39;UBERON:0002020,1.28e-17,34;UBERON:0003528,2.36e-14,29;UBERON:0002791,2.36e-14,29;UBERON:0001893,2.36e-14,29;UBERON:0010314,3.75e-10,92;UBERON:0000956,1.29e-09,21;UBERON:0001869,1.29e-09,21;UBERON:0000203,1.29e-09,21;UBERON:0002619,1.66e-07,17 | |||
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| |||
|short_description=p2@Hexim2 | |||
}} |
Revision as of 06:08, 5 August 2015
Short description: | p2@Hexim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hexim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000107037_5end |
EntrezGene: | 71059 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.33e-15 | 23 |
neuroblast (sensu Vertebrata) | 6.33e-15 | 23 |
neuron | 2.16e-12 | 33 |
neuronal stem cell | 2.16e-12 | 33 |
neuroblast | 2.16e-12 | 33 |
electrically signaling cell | 2.16e-12 | 33 |
ectodermal cell | 1.79e-09 | 44 |
neurectodermal cell | 1.79e-09 | 44 |
neural cell | 3.17e-09 | 43 |
electrically responsive cell | 1.44e-08 | 39 |
electrically active cell | 1.44e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.58e-26 | 73 |
nervous system | 2.17e-24 | 75 |
neurectoderm | 4.90e-24 | 64 |
neural plate | 4.90e-24 | 64 |
presumptive neural plate | 4.90e-24 | 64 |
regional part of nervous system | 7.20e-24 | 54 |
ectoderm-derived structure | 1.92e-23 | 95 |
ectoderm | 1.92e-23 | 95 |
presumptive ectoderm | 1.92e-23 | 95 |
neural tube | 1.77e-22 | 52 |
neural rod | 1.77e-22 | 52 |
future spinal cord | 1.77e-22 | 52 |
neural keel | 1.77e-22 | 52 |
pre-chordal neural plate | 3.72e-20 | 49 |
ecto-epithelium | 6.05e-20 | 73 |
brain | 2.50e-19 | 47 |
future brain | 2.50e-19 | 47 |
regional part of brain | 1.06e-18 | 46 |
anterior neural tube | 2.31e-18 | 40 |
regional part of forebrain | 1.20e-17 | 39 |
forebrain | 1.20e-17 | 39 |
future forebrain | 1.20e-17 | 39 |
gray matter | 1.28e-17 | 34 |
brain grey matter | 2.36e-14 | 29 |
regional part of telencephalon | 2.36e-14 | 29 |
telencephalon | 2.36e-14 | 29 |
structure with developmental contribution from neural crest | 3.75e-10 | 92 |
cerebral cortex | 1.29e-09 | 21 |
cerebral hemisphere | 1.29e-09 | 21 |
pallium | 1.29e-09 | 21 |
regional part of cerebral cortex | 1.66e-07 | 17 |