FFCP PHASE1:Mm9::chr12:91477703..91477707,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:91477703..91477707,+
|short_description=p@chr12:91477703..91477707,+
|description=CAGE_peak_at_chr12:91477703..91477707,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:91477703..91477707,+ | |||
|description=CAGE_peak_at_chr12:91477703..91477707,+ | |||
|id=chr12:91477703..91477707,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.57e-15!71;UBERON:0003075!1.57e-15!71;UBERON:0007284!1.57e-15!71;UBERON:0000033!3.24e-15!63;UBERON:0001049!1.79e-14!52;UBERON:0005068!1.79e-14!52;UBERON:0006241!1.79e-14!52;UBERON:0007135!1.79e-14!52;UBERON:0000955!5.32e-14!50;UBERON:0006238!5.32e-14!50;UBERON:0002616!3.80e-13!49;UBERON:0001017!1.56e-12!73;UBERON:0005743!1.56e-12!73;UBERON:0000073!1.82e-12!75;UBERON:0001016!1.82e-12!75;UBERON:0004121!6.67e-12!102;UBERON:0000924!6.67e-12!102;UBERON:0006601!6.67e-12!102;UBERON:0003056!2.01e-11!49;UBERON:0002020!1.70e-10!34;UBERON:0003080!1.30e-09!40;UBERON:0002780!6.71e-09!39;UBERON:0001890!6.71e-09!39;UBERON:0006240!6.71e-09!39;UBERON:0007811!7.57e-09!86;UBERON:0002021!1.03e-08!10;UBERON:0000411!1.03e-08!10;UBERON:0001950!1.03e-08!10;UBERON:0002791!2.44e-08!29;UBERON:0003528!2.44e-08!29;UBERON:0001893!2.44e-08!29;UBERON:0002619!5.13e-08!17;UBERON:0000153!1.41e-07!94;UBERON:0000956!5.37e-07!21;UBERON:0001869!5.37e-07!21;UBERON:0000203!5.37e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.03e-17,10;UBERON:0000411,5.03e-17,10;UBERON:0001950,5.03e-17,10;UBERON:0002346,2.14e-14,64;UBERON:0003075,2.14e-14,64;UBERON:0007284,2.14e-14,64;UBERON:0000956,1.46e-13,21;UBERON:0001869,1.46e-13,21;UBERON:0000203,1.46e-13,21;UBERON:0002619,4.97e-13,17;UBERON:0000955,6.51e-13,47;UBERON:0006238,6.51e-13,47;UBERON:0000073,8.08e-13,54;UBERON:0010371,2.48e-12,73;UBERON:0003056,5.47e-12,49;UBERON:0004121,6.13e-12,95;UBERON:0000924,6.13e-12,95;UBERON:0006601,6.13e-12,95;UBERON:0001049,2.30e-11,52;UBERON:0005068,2.30e-11,52;UBERON:0006241,2.30e-11,52;UBERON:0007135,2.30e-11,52;UBERON:0002616,5.74e-11,46;UBERON:0001017,1.33e-10,73;UBERON:0001016,2.92e-10,75;UBERON:0002020,4.75e-10,34;UBERON:0003528,1.52e-09,29;UBERON:0002791,1.52e-09,29;UBERON:0001893,1.52e-09,29;UBERON:0010314,2.72e-09,92;UBERON:0003080,2.31e-08,40;UBERON:0002780,7.78e-07,39;UBERON:0001890,7.78e-07,39;UBERON:0006240,7.78e-07,39 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0.489963196859816,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0.589257170947335,1.13897344639282,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,8.78342391034641,9.42510180660548,0,0,0,0,1.19832511523858,0.915001205637253,0.879580464790051,1.73824320192276,1.53429274398198,0.41557608911912,0.973447578406546,0.101839363850316,0,0,0,0,0,0,0.60281927134286,1.56483948048054,0.896796041993948,1.21812241927647,1.29351685369508,0,0,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0,0.233530684734339,0,0,0,0,0,0,1.05144974282064,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0.44292937929755,0,0,0,0,0,0,0,0,0.321101179975584,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,3.53453448063988,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0.322928853391811,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,3.43737308063638,3.60891682921744,0.685082519770642,3.0215755895588,0,1.35096360967266,1.81256963593682,1.55328093525546,0,0,0.682934423016537,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0.402048282689293,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.436039249896986,0.470546902076653,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0,0.77468420592983,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0.489963196859816,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0.0914876436024097,0.52091337055676,0,0,0.45839474333043,0.589257170947335,1.13897344639282,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,8.78342391034641,9.42510180660548,0,0,0,0,1.19832511523858,0.915001205637253,0.879580464790051,1.73824320192276,1.53429274398198,0.41557608911912,0.973447578406546,0.101839363850316,0,0,0,0,0,0,0.60281927134286,1.56483948048054,0.896796041993948,1.21812241927647,1.29351685369508,0,0,0,0,0,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0,0.233530684734339,0,0,0,0,0,0,1.05144974282064,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0.44292937929755,0,0,0,0,0,0,0,0,0.321101179975584,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,3.53453448063988,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0,0,0.322928853391811,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,3.43737308063638,3.60891682921744,0.685082519770642,3.0215755895588,0,1.35096360967266,1.81256963593682,1.55328093525546,0,0,0.682934423016537,0,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.192075457214608,0.402048282689293,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.436039249896986,0.470546902076653,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0,0.77468420592983,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr12:91477703..91477707,+ | |||
}} | }} |
Latest revision as of 11:26, 5 August 2015
Short description: | p@chr12:91477703..91477707, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:91477703..91477707, + |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.03e-17 | 10 |
visual cortex | 5.03e-17 | 10 |
neocortex | 5.03e-17 | 10 |
neurectoderm | 2.14e-14 | 64 |
neural plate | 2.14e-14 | 64 |
presumptive neural plate | 2.14e-14 | 64 |
cerebral cortex | 1.46e-13 | 21 |
cerebral hemisphere | 1.46e-13 | 21 |
pallium | 1.46e-13 | 21 |
regional part of cerebral cortex | 4.97e-13 | 17 |
brain | 6.51e-13 | 47 |
future brain | 6.51e-13 | 47 |
regional part of nervous system | 8.08e-13 | 54 |
ecto-epithelium | 2.48e-12 | 73 |
pre-chordal neural plate | 5.47e-12 | 49 |
ectoderm-derived structure | 6.13e-12 | 95 |
ectoderm | 6.13e-12 | 95 |
presumptive ectoderm | 6.13e-12 | 95 |
neural tube | 2.30e-11 | 52 |
neural rod | 2.30e-11 | 52 |
future spinal cord | 2.30e-11 | 52 |
neural keel | 2.30e-11 | 52 |
regional part of brain | 5.74e-11 | 46 |
central nervous system | 1.33e-10 | 73 |
nervous system | 2.92e-10 | 75 |
gray matter | 4.75e-10 | 34 |
brain grey matter | 1.52e-09 | 29 |
regional part of telencephalon | 1.52e-09 | 29 |
telencephalon | 1.52e-09 | 29 |
structure with developmental contribution from neural crest | 2.72e-09 | 92 |
anterior neural tube | 2.31e-08 | 40 |
regional part of forebrain | 7.78e-07 | 39 |
forebrain | 7.78e-07 | 39 |
future forebrain | 7.78e-07 | 39 |