FFCP PHASE1:Mm9::chr13:12199136..12199148,-: Difference between revisions
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{{FFCP|EntrezGene=20191|HGNC=|MCL_coexpression_id=405|UniProt=E9Q401,Q80ZZ5,Q60835,Q9ERN6|association_with_transcript=63bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end|description=CAGE_peak_4_at_Ryr2_5end|id=chr13:12199136..12199148,-|ontology_enrichment_celltype=CL:0000117!9.08e-08!23;CL:0000337!9.08e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.22e-08,23;CL:0000337,3.22e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.16e-13!34;UBERON:0002346!5.75e-13!71;UBERON:0003075!5.75e-13!71;UBERON:0007284!5.75e-13!71;UBERON:0001049!6.39e-13!52;UBERON:0005068!6.39e-13!52;UBERON:0006241!6.39e-13!52;UBERON:0007135!6.39e-13!52;UBERON:0001017!1.35e-12!73;UBERON:0005743!1.35e-12!73;UBERON:0000955!5.51e-12!50;UBERON:0006238!5.51e-12!50;UBERON:0007100!7.44e-12!18;UBERON:0000948!7.44e-12!18;UBERON:0005498!7.44e-12!18;UBERON:0004140!7.44e-12!18;UBERON:0009881!7.44e-12!18;UBERON:0004141!7.44e-12!18;UBERON:0003084!7.44e-12!18;UBERON:0007005!7.44e-12!18;UBERON:0004139!7.44e-12!18;UBERON:0004291!7.44e-12!18;UBERON:0000073!8.95e-12!75;UBERON:0001016!8.95e-12!75;UBERON:0002616!1.99e-11!49;UBERON:0000025!8.70e-11!114;UBERON:0000033!9.00e-11!63;UBERON:0002791!1.04e-10!29;UBERON:0003528!1.04e-10!29;UBERON:0001893!1.04e-10!29;UBERON:0004111!5.23e-10!122;UBERON:0004121!7.20e-10!102;UBERON:0000924!7.20e-10!102;UBERON:0006601!7.20e-10!102;UBERON:0002021!2.36e-09!10;UBERON:0000411!2.36e-09!10;UBERON:0001950!2.36e-09!10;UBERON:0003080!2.34e-08!40;UBERON:0003056!6.35e-08!49;UBERON:0002780!6.60e-08!39;UBERON:0001890!6.60e-08!39;UBERON:0006240!6.60e-08!39;UBERON:0004535!1.10e-07!23;UBERON:0001009!1.10e-07!23;UBERON:0002619!6.90e-07!17;UBERON:0000956!7.46e-07!21;UBERON:0001869!7.46e-07!21;UBERON:0000203!7.46e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.65e-30,92;UBERON:0000073,4.42e-26,54;UBERON:0001049,2.79e-23,52;UBERON:0005068,2.79e-23,52;UBERON:0006241,2.79e-23,52;UBERON:0007135,2.79e-23,52;UBERON:0000025,3.61e-22,114;UBERON:0002020,1.71e-21,34;UBERON:0001017,4.08e-20,73;UBERON:0004111,4.61e-20,122;UBERON:0002021,1.71e-19,10;UBERON:0000411,1.71e-19,10;UBERON:0001950,1.71e-19,10;UBERON:0001016,2.33e-19,75;UBERON:0007100,4.55e-19,18;UBERON:0000948,4.55e-19,18;UBERON:0005498,4.55e-19,18;UBERON:0004140,4.55e-19,18;UBERON:0009881,4.55e-19,18;UBERON:0004141,4.55e-19,18;UBERON:0003084,4.55e-19,18;UBERON:0007005,4.55e-19,18;UBERON:0004139,4.55e-19,18;UBERON:0004291,4.55e-19,18;UBERON:0002346,1.59e-17,64;UBERON:0003075,1.59e-17,64;UBERON:0007284,1.59e-17,64;UBERON:0000955,1.93e-17,47;UBERON:0006238,1.93e-17,47;UBERON:0002616,2.57e-16,46;UBERON:0003528,2.48e-15,29;UBERON:0002791,2.48e-15,29;UBERON:0001893,2.48e-15,29;UBERON:0010371,1.83e-14,73;UBERON:0004535,3.94e-14,23;UBERON:0001009,3.94e-14,23;UBERON:0004121,1.45e-13,95;UBERON:0000924,1.45e-13,95;UBERON:0006601,1.45e-13,95;UBERON:0003076,4.33e-13,12;UBERON:0003057,4.33e-13,12;UBERON:0003103,5.11e-13,43;UBERON:0002619,9.17e-13,17;UBERON:0003080,1.40e-12,40;UBERON:0000956,9.38e-12,21;UBERON:0001869,9.38e-12,21;UBERON:0000203,9.38e-12,21;UBERON:0002780,1.15e-11,39;UBERON:0001890,1.15e-11,39;UBERON:0006240,1.15e-11,39;UBERON:0000483,4.44e-11,174;UBERON:0000119,7.70e-11,176;UBERON:0002240,9.38e-10,6;UBERON:0005174,9.38e-10,6;UBERON:0001137,9.38e-10,6;UBERON:0003056,2.10e-09,49;UBERON:0004872,8.63e-09,33;UBERON:0001948,2.75e-08,5;UBERON:0002315,2.75e-08,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.71390590642282,1.10434270475807,0.122490799214954,0.0958454710182364,0,7.70811166995721,2.042997409363,2.30409799884365,1.05509030184155,0.365950574409639,1.56274011167028,0.837548997004143,1.12552522006336,1.98637722109853,2.35702868378934,2.27794689278565,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,4.39171195517321,8.58731497935166,0,0,0,0,1.04853447583376,1.83000241127451,0.376963056338593,3.65031072403781,4.34716277461562,0.83115217823824,2.10913641988085,0,0,0,0,0,0,0,0.150704817835715,0.476255494059295,0.12811372028485,0.374806898238915,0.517406741478031,0,0,0.351902248327898,0,0,0,0,0,0,0,0,2.89976081549703,0.938104239924385,1.2604344302271,2.60419209143731,2.55793501271625,2.93107514486019,2.79040733700489,6.70683503499048,7.00592054203017,9.37991144506839,5.58169377868924,6.64764238276017,6.43279944671462,5.04965265169416,4.02619256281115,4.41608891984667,0.205809224758569,0,0,0,0,0.38660238396628,0.605050573870028,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0.167506257441816,0.714130922658041,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,2.72936002979246,1.05490517932983,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,2.24924921495265,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,2.41052892613663,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0.209088296014469,0,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.549454872801795,0,0,5.0827665835536,3.68260189205742,5.15605962095457,8.07709957015332,4.7955776383945,5.2877572817279,10.1253375034771,5.85417564191487,4.53142408984205,2.5888015587591,0.31136204275253,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.287177344778066,0,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0,0.394017929502254,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p4@Ryr2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20191 | |||
|HGNC= | |||
|MCL_coexpression_id=405 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q401,uniprot:Q80ZZ5,uniprot:Q60835,uniprot:Q9ERN6 | |||
|association_with_transcript=63bp_to_ENSMUST00000021750,ENSMUST00000170156,NM_023868,uc007pld.1,uc007plf.1,uc011ywc.1_5end | |||
|cluster_id=chr13:12199136..12199148,- | |||
|description=CAGE_peak_4_at_Ryr2_5end | |||
|id=chr13:12199136..12199148,- | |||
|ontology_enrichment_celltype=CL:0000117!9.08e-08!23;CL:0000337!9.08e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.22e-08,23;CL:0000337,3.22e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.16e-13!34;UBERON:0002346!5.75e-13!71;UBERON:0003075!5.75e-13!71;UBERON:0007284!5.75e-13!71;UBERON:0001049!6.39e-13!52;UBERON:0005068!6.39e-13!52;UBERON:0006241!6.39e-13!52;UBERON:0007135!6.39e-13!52;UBERON:0001017!1.35e-12!73;UBERON:0005743!1.35e-12!73;UBERON:0000955!5.51e-12!50;UBERON:0006238!5.51e-12!50;UBERON:0007100!7.44e-12!18;UBERON:0000948!7.44e-12!18;UBERON:0005498!7.44e-12!18;UBERON:0004140!7.44e-12!18;UBERON:0009881!7.44e-12!18;UBERON:0004141!7.44e-12!18;UBERON:0003084!7.44e-12!18;UBERON:0007005!7.44e-12!18;UBERON:0004139!7.44e-12!18;UBERON:0004291!7.44e-12!18;UBERON:0000073!8.95e-12!75;UBERON:0001016!8.95e-12!75;UBERON:0002616!1.99e-11!49;UBERON:0000025!8.70e-11!114;UBERON:0000033!9.00e-11!63;UBERON:0002791!1.04e-10!29;UBERON:0003528!1.04e-10!29;UBERON:0001893!1.04e-10!29;UBERON:0004111!5.23e-10!122;UBERON:0004121!7.20e-10!102;UBERON:0000924!7.20e-10!102;UBERON:0006601!7.20e-10!102;UBERON:0002021!2.36e-09!10;UBERON:0000411!2.36e-09!10;UBERON:0001950!2.36e-09!10;UBERON:0003080!2.34e-08!40;UBERON:0003056!6.35e-08!49;UBERON:0002780!6.60e-08!39;UBERON:0001890!6.60e-08!39;UBERON:0006240!6.60e-08!39;UBERON:0004535!1.10e-07!23;UBERON:0001009!1.10e-07!23;UBERON:0002619!6.90e-07!17;UBERON:0000956!7.46e-07!21;UBERON:0001869!7.46e-07!21;UBERON:0000203!7.46e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.65e-30,92;UBERON:0000073,4.42e-26,54;UBERON:0001049,2.79e-23,52;UBERON:0005068,2.79e-23,52;UBERON:0006241,2.79e-23,52;UBERON:0007135,2.79e-23,52;UBERON:0000025,3.61e-22,114;UBERON:0002020,1.71e-21,34;UBERON:0001017,4.08e-20,73;UBERON:0004111,4.61e-20,122;UBERON:0002021,1.71e-19,10;UBERON:0000411,1.71e-19,10;UBERON:0001950,1.71e-19,10;UBERON:0001016,2.33e-19,75;UBERON:0007100,4.55e-19,18;UBERON:0000948,4.55e-19,18;UBERON:0005498,4.55e-19,18;UBERON:0004140,4.55e-19,18;UBERON:0009881,4.55e-19,18;UBERON:0004141,4.55e-19,18;UBERON:0003084,4.55e-19,18;UBERON:0007005,4.55e-19,18;UBERON:0004139,4.55e-19,18;UBERON:0004291,4.55e-19,18;UBERON:0002346,1.59e-17,64;UBERON:0003075,1.59e-17,64;UBERON:0007284,1.59e-17,64;UBERON:0000955,1.93e-17,47;UBERON:0006238,1.93e-17,47;UBERON:0002616,2.57e-16,46;UBERON:0003528,2.48e-15,29;UBERON:0002791,2.48e-15,29;UBERON:0001893,2.48e-15,29;UBERON:0010371,1.83e-14,73;UBERON:0004535,3.94e-14,23;UBERON:0001009,3.94e-14,23;UBERON:0004121,1.45e-13,95;UBERON:0000924,1.45e-13,95;UBERON:0006601,1.45e-13,95;UBERON:0003076,4.33e-13,12;UBERON:0003057,4.33e-13,12;UBERON:0003103,5.11e-13,43;UBERON:0002619,9.17e-13,17;UBERON:0003080,1.40e-12,40;UBERON:0000956,9.38e-12,21;UBERON:0001869,9.38e-12,21;UBERON:0000203,9.38e-12,21;UBERON:0002780,1.15e-11,39;UBERON:0001890,1.15e-11,39;UBERON:0006240,1.15e-11,39;UBERON:0000483,4.44e-11,174;UBERON:0000119,7.70e-11,176;UBERON:0002240,9.38e-10,6;UBERON:0005174,9.38e-10,6;UBERON:0001137,9.38e-10,6;UBERON:0003056,2.10e-09,49;UBERON:0004872,8.63e-09,33;UBERON:0001948,2.75e-08,5;UBERON:0002315,2.75e-08,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.71390590642282,1.10434270475807,0.122490799214954,0.0958454710182364,0,7.70811166995721,2.042997409363,2.30409799884365,1.05509030184155,0.365950574409639,1.56274011167028,0.837548997004143,1.12552522006336,1.98637722109853,2.35702868378934,2.27794689278565,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,4.39171195517321,8.58731497935166,0,0,0,0,1.04853447583376,1.83000241127451,0.376963056338593,3.65031072403781,4.34716277461562,0.83115217823824,2.10913641988085,0,0,0,0,0,0,0,0.150704817835715,0.476255494059295,0.12811372028485,0.374806898238915,0.517406741478031,0,0,0.351902248327898,0,0,0,0,0,0,0,0,2.89976081549703,0.938104239924385,1.2604344302271,2.60419209143731,2.55793501271625,2.93107514486019,2.79040733700489,6.70683503499048,7.00592054203017,9.37991144506839,5.58169377868924,6.64764238276017,6.43279944671462,5.04965265169416,4.02619256281115,4.41608891984667,0.205809224758569,0,0,0,0,0.38660238396628,0.605050573870028,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0.167506257441816,0.714130922658041,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,2.72936002979246,1.05490517932983,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,2.24924921495265,0,0,0.325773918707152,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,2.41052892613663,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0.609958401380546,0.216010681643603,0.209088296014469,0,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0.295379054349154,0,0.15241361331,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0,0.549454872801795,0,0,5.0827665835536,3.68260189205742,5.15605962095457,8.07709957015332,4.7955776383945,5.2877572817279,10.1253375034771,5.85417564191487,4.53142408984205,2.5888015587591,0.31136204275253,0.399024873401031,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.256100609619477,0.287177344778066,0,0.231768651889711,0.578727661391115,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0.561142271657738,0,0.394017929502254,0.409231043169689,0.464810523557898,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Ryr2 | |||
}} |
Revision as of 16:15, 5 August 2015
Short description: | p4@Ryr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ryr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | 63bp_to_ENSMUST00000021750, ENSMUST00000170156, NM_023868, uc007pld.1, uc007plf.1, uc011ywc.1_5end |
EntrezGene: | 20191 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.22e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.22e-08 | 23 |