FFCP PHASE1:Mm9::chr8:113443726..113443756,+: Difference between revisions
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{{FFCP|EntrezGene=20444|HGNC=|MCL_coexpression_id=1841|UniProt=Q11204,D3Z3V2|association_with_transcript=-8bp_to_NM_009179,uc009nlj.2,uc009nlk.2_5end|description=CAGE_peak_3_at_St3gal2_5end|id=chr8:113443726..113443756,+|ontology_enrichment_celltype=CL:0000117!3.78e-11!23;CL:0000337!3.78e-11!23;CL:0002319!4.98e-09!43;CL:0000221!1.84e-08!44;CL:0000133!1.84e-08!44;CL:0000055!1.89e-07!50;CL:0000540!5.59e-07!33;CL:0000047!5.59e-07!33;CL:0000031!5.59e-07!33;CL:0000404!5.59e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-12,23;CL:0000337,1.54e-12,23;CL:0002319,6.81e-10,43;CL:0000221,2.23e-09,44;CL:0000133,2.23e-09,44;CL:0000540,3.17e-08,33;CL:0000047,3.17e-08,33;CL:0000031,3.17e-08,33;CL:0000404,3.17e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.45e-23!75;UBERON:0001016!1.45e-23!75;UBERON:0001017!1.78e-23!73;UBERON:0005743!1.78e-23!73;UBERON:0001049!2.27e-23!52;UBERON:0005068!2.27e-23!52;UBERON:0006241!2.27e-23!52;UBERON:0007135!2.27e-23!52;UBERON:0000955!3.33e-22!50;UBERON:0006238!3.33e-22!50;UBERON:0002616!1.03e-21!49;UBERON:0000033!8.11e-20!63;UBERON:0002346!2.78e-19!71;UBERON:0003075!2.78e-19!71;UBERON:0007284!2.78e-19!71;UBERON:0002020!1.31e-18!34;UBERON:0004121!1.55e-18!102;UBERON:0000924!1.55e-18!102;UBERON:0006601!1.55e-18!102;UBERON:0003080!1.89e-17!40;UBERON:0002780!5.44e-17!39;UBERON:0001890!5.44e-17!39;UBERON:0006240!5.44e-17!39;UBERON:0003056!7.49e-17!49;UBERON:0002791!6.72e-16!29;UBERON:0003528!6.72e-16!29;UBERON:0001893!6.72e-16!29;UBERON:0007811!7.48e-12!86;UBERON:0000956!1.39e-11!21;UBERON:0001869!1.39e-11!21;UBERON:0000203!1.39e-11!21;UBERON:0000153!1.53e-11!94;UBERON:0002619!5.83e-10!17;UBERON:0002021!2.03e-07!10;UBERON:0000411!2.03e-07!10;UBERON:0001950!2.03e-07!10;UBERON:0000025!5.33e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.20e-26,54;UBERON:0001017,4.32e-26,73;UBERON:0001016,1.30e-25,75;UBERON:0001049,6.67e-25,52;UBERON:0005068,6.67e-25,52;UBERON:0006241,6.67e-25,52;UBERON:0007135,6.67e-25,52;UBERON:0002020,1.70e-21,34;UBERON:0000955,1.76e-21,47;UBERON:0006238,1.76e-21,47;UBERON:0002346,2.93e-21,64;UBERON:0003075,2.93e-21,64;UBERON:0007284,2.93e-21,64;UBERON:0002616,6.51e-21,46;UBERON:0004121,3.27e-19,95;UBERON:0000924,3.27e-19,95;UBERON:0006601,3.27e-19,95;UBERON:0003080,2.15e-18,40;UBERON:0003528,3.17e-18,29;UBERON:0002791,3.17e-18,29;UBERON:0001893,3.17e-18,29;UBERON:0002780,7.55e-18,39;UBERON:0001890,7.55e-18,39;UBERON:0006240,7.55e-18,39;UBERON:0010371,2.80e-17,73;UBERON:0003056,4.66e-17,49;UBERON:0010314,4.16e-15,92;UBERON:0000956,5.04e-13,21;UBERON:0001869,5.04e-13,21;UBERON:0000203,5.04e-13,21;UBERON:0002619,4.68e-11,17;UBERON:0002021,1.19e-08,10;UBERON:0000411,1.19e-08,10;UBERON:0001950,1.19e-08,10;UBERON:0003076,4.36e-07,12;UBERON:0003057,4.36e-07,12|phase1_expression=2.40223270657191,0,0,0,0,0,0,1.42035655785734,0.140788722151667,0.234064526321993,0.513653904676515,0.797721589953364,0.856003649656029,0.34968160967599,0.999329285446988,0.202475267389826,0.699561878128147,1.26184866143295,0.822686601634433,0.84877930359606,0.680346321208558,0.794327609607082,0.522399578277871,0.47997726838022,0,0,0,0,0,0,0,1.90509202037889,2.46025915033828,0,0,0.166234645358492,0,0.418531630736908,0,1.57057123192139,1.17646297606203,2.04913645487534,0.485510353031154,0.503587271902309,0.506884656097573,0.550640256485045,2.34717403304412,0.872100625521786,3.07560655828261,5.05517737593137,1.1198913730029,1.43752564364972,1.34226084846189,2.17608642603403,0,1.28629718017973,1.14613375975503,0.515672092277442,2.42779753031517,4.23192783417626,4.43681982454325,2.71075625655306,0.889294796111139,0.449949858640699,0,1.4209602298922,2.09720077362883,2.30530983192933,2.17748185847803,1.62007125998029,3.36519938162211,4.57041575046086,3.53389665522582,1.71487118900936,2.68367318851062,0.919218786610021,4.40463523997555,3.06449611404451,3.37934373163736,3.16527090552465,5.39777097254217,4.16730696445408,2.23346399201105,3.37657566019008,2.75036845998258,4.71405736757868,2.27794689278565,2.79599168737951,0.984440513331393,1.51143120213571,0.579728977403356,0.860423876981386,0,0,0,0,0.561777680527007,0.852151612890289,0.779358013808606,1.06001872353102,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0,1.63286352971307,1.90833859442749,0.913396434936424,0.230615497256059,0.301445281105245,1.05829836422134,1.75933227861546,0.494389935468748,0.144599356919912,0.884610551949874,2.10296904931632,0.883366073841574,0,0,4.68449275218475,6.70229461803056,0.255457055208591,0.359445373517761,0,0.508280908292259,2.54644086988199,3.20250421973039,7.53926112677186,5.21472960576829,6.64860189058859,4.57133698031032,5.19172041816825,1.32391173005411,0.746441823660558,0.252722758433675,0.631325567659422,0.650602214813519,2.5289231487682,0.900310649026746,1.20563854268572,1.42876648217788,1.40925092313335,1.3118241438362,1.55222022443409,1.07783996466421,1.70195472151037,1.23165786914764,1.7535658594206,0.83414174767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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20444 | |||
|HGNC= | |||
|MCL_coexpression_id=1841 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q11204,uniprot:D3Z3V2 | |||
|association_with_transcript=-8bp_to_NM_009179,uc009nlj.2,uc009nlk.2_5end | |||
|cluster_id=chr8:113443726..113443756,+ | |||
|description=CAGE_peak_3_at_St3gal2_5end | |||
|id=chr8:113443726..113443756,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.78e-11!23;CL:0000337!3.78e-11!23;CL:0002319!4.98e-09!43;CL:0000221!1.84e-08!44;CL:0000133!1.84e-08!44;CL:0000055!1.89e-07!50;CL:0000540!5.59e-07!33;CL:0000047!5.59e-07!33;CL:0000031!5.59e-07!33;CL:0000404!5.59e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-12,23;CL:0000337,1.54e-12,23;CL:0002319,6.81e-10,43;CL:0000221,2.23e-09,44;CL:0000133,2.23e-09,44;CL:0000540,3.17e-08,33;CL:0000047,3.17e-08,33;CL:0000031,3.17e-08,33;CL:0000404,3.17e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.45e-23!75;UBERON:0001016!1.45e-23!75;UBERON:0001017!1.78e-23!73;UBERON:0005743!1.78e-23!73;UBERON:0001049!2.27e-23!52;UBERON:0005068!2.27e-23!52;UBERON:0006241!2.27e-23!52;UBERON:0007135!2.27e-23!52;UBERON:0000955!3.33e-22!50;UBERON:0006238!3.33e-22!50;UBERON:0002616!1.03e-21!49;UBERON:0000033!8.11e-20!63;UBERON:0002346!2.78e-19!71;UBERON:0003075!2.78e-19!71;UBERON:0007284!2.78e-19!71;UBERON:0002020!1.31e-18!34;UBERON:0004121!1.55e-18!102;UBERON:0000924!1.55e-18!102;UBERON:0006601!1.55e-18!102;UBERON:0003080!1.89e-17!40;UBERON:0002780!5.44e-17!39;UBERON:0001890!5.44e-17!39;UBERON:0006240!5.44e-17!39;UBERON:0003056!7.49e-17!49;UBERON:0002791!6.72e-16!29;UBERON:0003528!6.72e-16!29;UBERON:0001893!6.72e-16!29;UBERON:0007811!7.48e-12!86;UBERON:0000956!1.39e-11!21;UBERON:0001869!1.39e-11!21;UBERON:0000203!1.39e-11!21;UBERON:0000153!1.53e-11!94;UBERON:0002619!5.83e-10!17;UBERON:0002021!2.03e-07!10;UBERON:0000411!2.03e-07!10;UBERON:0001950!2.03e-07!10;UBERON:0000025!5.33e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.20e-26,54;UBERON:0001017,4.32e-26,73;UBERON:0001016,1.30e-25,75;UBERON:0001049,6.67e-25,52;UBERON:0005068,6.67e-25,52;UBERON:0006241,6.67e-25,52;UBERON:0007135,6.67e-25,52;UBERON:0002020,1.70e-21,34;UBERON:0000955,1.76e-21,47;UBERON:0006238,1.76e-21,47;UBERON:0002346,2.93e-21,64;UBERON:0003075,2.93e-21,64;UBERON:0007284,2.93e-21,64;UBERON:0002616,6.51e-21,46;UBERON:0004121,3.27e-19,95;UBERON:0000924,3.27e-19,95;UBERON:0006601,3.27e-19,95;UBERON:0003080,2.15e-18,40;UBERON:0003528,3.17e-18,29;UBERON:0002791,3.17e-18,29;UBERON:0001893,3.17e-18,29;UBERON:0002780,7.55e-18,39;UBERON:0001890,7.55e-18,39;UBERON:0006240,7.55e-18,39;UBERON:0010371,2.80e-17,73;UBERON:0003056,4.66e-17,49;UBERON:0010314,4.16e-15,92;UBERON:0000956,5.04e-13,21;UBERON:0001869,5.04e-13,21;UBERON:0000203,5.04e-13,21;UBERON:0002619,4.68e-11,17;UBERON:0002021,1.19e-08,10;UBERON:0000411,1.19e-08,10;UBERON:0001950,1.19e-08,10;UBERON:0003076,4.36e-07,12;UBERON:0003057,4.36e-07,12 | |||
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| |||
|short_description=p3@St3gal2 | |||
}} |
Revision as of 22:18, 5 August 2015
Short description: | p3@St3gal2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_St3gal2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1841 |
Association with transcript: | -8bp_to_NM_009179, uc009nlj.2, uc009nlk.2_5end |
EntrezGene: | 20444 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.54e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.54e-12 | 23 |
neural cell | 6.81e-10 | 43 |
ectodermal cell | 2.23e-09 | 44 |
neurectodermal cell | 2.23e-09 | 44 |
neuron | 3.17e-08 | 33 |
neuronal stem cell | 3.17e-08 | 33 |
neuroblast | 3.17e-08 | 33 |
electrically signaling cell | 3.17e-08 | 33 |