FFCP PHASE1:Mm9::chr3:138738062..138738073,-: Difference between revisions
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{{FFCP|EntrezGene=229877|HGNC=|MCL_coexpression_id=1|UniProt=E9Q6Q4,E9Q912,Q3TPS9,Q3TA69,Q3TU36,Q8BKH0,Q3TYN8|association_with_transcript=89bp_to_ENSMUST00000029796,ENSMUST00000098574,NM_001040690,NM_145544,uc008rnr.1,uc008rns.1,uc008rnt.1,uc008rnu.1,uc008rnv.1,uc008rnw.1,uc008rnx.1_5end|description=CAGE_peak_5_at_Rap1gds1_5end|id=chr3:138738062..138738073,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.31e-11!75;UBERON:0001016!3.31e-11!75;UBERON:0001017!3.88e-11!73;UBERON:0005743!3.88e-11!73;UBERON:0004121!2.85e-10!102;UBERON:0000924!2.85e-10!102;UBERON:0006601!2.85e-10!102;UBERON:0001049!1.20e-09!52;UBERON:0005068!1.20e-09!52;UBERON:0006241!1.20e-09!52;UBERON:0007135!1.20e-09!52;UBERON:0000033!3.21e-09!63;UBERON:0000955!4.19e-09!50;UBERON:0006238!4.19e-09!50;UBERON:0007811!8.61e-09!86;UBERON:0002616!1.41e-08!49;UBERON:0002346!1.94e-08!71;UBERON:0003075!1.94e-08!71;UBERON:0007284!1.94e-08!71;UBERON:0000153!2.02e-08!94;UBERON:0002021!5.02e-08!10;UBERON:0000411!5.02e-08!10;UBERON:0001950!5.02e-08!10;UBERON:0002020!8.64e-08!34;UBERON:0003056!1.92e-07!49;UBERON:0003080!4.02e-07!40;UBERON:0002619!7.42e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-23,54;UBERON:0001017,3.06e-21,73;UBERON:0001049,5.38e-21,52;UBERON:0005068,5.38e-21,52;UBERON:0006241,5.38e-21,52;UBERON:0007135,5.38e-21,52;UBERON:0001016,1.93e-20,75;UBERON:0002021,6.96e-20,10;UBERON:0000411,6.96e-20,10;UBERON:0001950,6.96e-20,10;UBERON:0002346,4.77e-17,64;UBERON:0003075,4.77e-17,64;UBERON:0007284,4.77e-17,64;UBERON:0000955,5.11e-17,47;UBERON:0006238,5.11e-17,47;UBERON:0002020,1.35e-16,34;UBERON:0002616,1.10e-15,46;UBERON:0004121,1.95e-15,95;UBERON:0000924,1.95e-15,95;UBERON:0006601,1.95e-15,95;UBERON:0003080,3.56e-15,40;UBERON:0010371,5.06e-14,73;UBERON:0002780,6.10e-14,39;UBERON:0001890,6.10e-14,39;UBERON:0006240,6.10e-14,39;UBERON:0002619,6.84e-13,17;UBERON:0003056,1.11e-12,49;UBERON:0003528,1.58e-12,29;UBERON:0002791,1.58e-12,29;UBERON:0001893,1.58e-12,29;UBERON:0000956,5.86e-12,21;UBERON:0001869,5.86e-12,21;UBERON:0000203,5.86e-12,21;UBERON:0010314,1.82e-10,92;UBERON:0000025,9.53e-08,114;UBERON:0002240,3.20e-07,6;UBERON:0005174,3.20e-07,6;UBERON:0001137,3.20e-07,6;UBERON:0011216,7.16e-07,194;UBERON:0004111,9.14e-07,122|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.60492842261366,1.00179145989269,0.503637815735669,0,1.16210991097419,0.985521055061667,1.87251621057595,0,0.0797721589953364,0.342401459862411,0.786783621770977,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,0,1.27564935226605,0.198581902401771,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.950117097281869,0.504060259519861,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0.837063261473815,1.5626706890476,0,0,0,0.485510353031154,0.125896817975577,0.405507724878058,0.367093504323363,0,0,0.659058548203415,0.777719596297134,0.979904951377538,0,0.503347818173209,0.725362142011344,0.672187598284928,0.771778308107841,0.286533439938757,1.03134418455488,0,2.11596391708813,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.518448061542388,0.135005938331691,0.420649922702764,1.42825492201902,1.10434270475807,0.489963196859816,0.287536413054709,0,1.10115880999389,4.72443150915195,3.68655679814984,0.263772575460388,0.457438218012048,0,3.35019598801657,0,2.29197371665215,2.94628585473668,2.13557521198654,0.745597783301202,0.605809546665472,0.377857800533928,1.15945795480671,0.860423876981386,0,0,0,1.34408066129201,0.280888840263504,0.511290967734173,0,0.35333957451034,0.985903938436763,0,0,0,0,0.253359865475099,0,0.11418387971906,0.776813650941515,0.29688427812965,0.520455980298408,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0.247194967734374,0.722996784599558,0,0.485300549842228,0.441683036920787,0.484875253135222,0,0.878342391034642,0.628340120440365,1.27728527604296,0.359445373517761,0.599902730993408,0.127070227073065,3.89455662452539,3.66000482254901,0.376963056338593,5.38855392596057,6.64860189058859,4.57133698031032,4.38051410282946,0.203678727700633,0.124406970610093,0.505445516867349,0.420883711772948,0.130120442962704,0.459804208866946,0.360124259610698,0.452114453507145,0.884474488967262,0.896796041993948,0.468508622798644,1.29351685369508,0.215567992932842,0.567318240503458,0.703804496655795,1.09597866213787,0,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0.568326998791185,0,0.469052119962192,0.36012412292203,0.946978942340841,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,3.57492912559016,0.617427674275707,1.65209391491899,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0,0.329397909448022,0.5026704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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:229877 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q6Q4,uniprot:E9Q912,uniprot:Q3TPS9,uniprot:Q3TA69,uniprot:Q3TU36,uniprot:Q8BKH0,uniprot:Q3TYN8 | |||
|association_with_transcript=89bp_to_ENSMUST00000029796,ENSMUST00000098574,NM_001040690,NM_145544,uc008rnr.1,uc008rns.1,uc008rnt.1,uc008rnu.1,uc008rnv.1,uc008rnw.1,uc008rnx.1_5end | |||
|cluster_id=chr3:138738062..138738073,- | |||
|description=CAGE_peak_5_at_Rap1gds1_5end | |||
|id=chr3:138738062..138738073,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.31e-11!75;UBERON:0001016!3.31e-11!75;UBERON:0001017!3.88e-11!73;UBERON:0005743!3.88e-11!73;UBERON:0004121!2.85e-10!102;UBERON:0000924!2.85e-10!102;UBERON:0006601!2.85e-10!102;UBERON:0001049!1.20e-09!52;UBERON:0005068!1.20e-09!52;UBERON:0006241!1.20e-09!52;UBERON:0007135!1.20e-09!52;UBERON:0000033!3.21e-09!63;UBERON:0000955!4.19e-09!50;UBERON:0006238!4.19e-09!50;UBERON:0007811!8.61e-09!86;UBERON:0002616!1.41e-08!49;UBERON:0002346!1.94e-08!71;UBERON:0003075!1.94e-08!71;UBERON:0007284!1.94e-08!71;UBERON:0000153!2.02e-08!94;UBERON:0002021!5.02e-08!10;UBERON:0000411!5.02e-08!10;UBERON:0001950!5.02e-08!10;UBERON:0002020!8.64e-08!34;UBERON:0003056!1.92e-07!49;UBERON:0003080!4.02e-07!40;UBERON:0002619!7.42e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-23,54;UBERON:0001017,3.06e-21,73;UBERON:0001049,5.38e-21,52;UBERON:0005068,5.38e-21,52;UBERON:0006241,5.38e-21,52;UBERON:0007135,5.38e-21,52;UBERON:0001016,1.93e-20,75;UBERON:0002021,6.96e-20,10;UBERON:0000411,6.96e-20,10;UBERON:0001950,6.96e-20,10;UBERON:0002346,4.77e-17,64;UBERON:0003075,4.77e-17,64;UBERON:0007284,4.77e-17,64;UBERON:0000955,5.11e-17,47;UBERON:0006238,5.11e-17,47;UBERON:0002020,1.35e-16,34;UBERON:0002616,1.10e-15,46;UBERON:0004121,1.95e-15,95;UBERON:0000924,1.95e-15,95;UBERON:0006601,1.95e-15,95;UBERON:0003080,3.56e-15,40;UBERON:0010371,5.06e-14,73;UBERON:0002780,6.10e-14,39;UBERON:0001890,6.10e-14,39;UBERON:0006240,6.10e-14,39;UBERON:0002619,6.84e-13,17;UBERON:0003056,1.11e-12,49;UBERON:0003528,1.58e-12,29;UBERON:0002791,1.58e-12,29;UBERON:0001893,1.58e-12,29;UBERON:0000956,5.86e-12,21;UBERON:0001869,5.86e-12,21;UBERON:0000203,5.86e-12,21;UBERON:0010314,1.82e-10,92;UBERON:0000025,9.53e-08,114;UBERON:0002240,3.20e-07,6;UBERON:0005174,3.20e-07,6;UBERON:0001137,3.20e-07,6;UBERON:0011216,7.16e-07,194;UBERON:0004111,9.14e-07,122 | |||
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| |||
|short_description=p5@Rap1gds1 | |||
}} |
Revision as of 03:14, 6 August 2015
Short description: | p5@Rap1gds1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rap1gds1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 89bp_to_ENSMUST00000029796, ENSMUST00000098574, NM_001040690, NM_145544, uc008rnr.1, uc008rns.1, uc008rnt.1, uc008rnu.1, uc008rnv.1, uc008rnw.1, uc008rnx.1_5end |
EntrezGene: | 229877 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data