FFCP PHASE1:Mm9::chr18:77736935..77736948,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:77736935..77736948,- to FFCP PHASE1:Mm9::chr18:77736935..77736948,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=199 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:77736935..77736948,- | |||
|description=CAGE_peak_at_chr18:77736935..77736948,- | |||
|id=chr18:77736935..77736948,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.51e-15!71;UBERON:0003075!1.51e-15!71;UBERON:0007284!1.51e-15!71;UBERON:0003056!4.38e-14!49;UBERON:0000033!1.93e-12!63;UBERON:0004121!6.51e-12!102;UBERON:0000924!6.51e-12!102;UBERON:0006601!6.51e-12!102;UBERON:0000956!2.66e-11!21;UBERON:0001869!2.66e-11!21;UBERON:0000203!2.66e-11!21;UBERON:0000955!5.54e-11!50;UBERON:0006238!5.54e-11!50;UBERON:0003080!1.01e-10!40;UBERON:0002619!1.43e-10!17;UBERON:0002021!1.85e-10!10;UBERON:0000411!1.85e-10!10;UBERON:0001950!1.85e-10!10;UBERON:0002616!2.28e-10!49;UBERON:0002780!2.88e-10!39;UBERON:0001890!2.88e-10!39;UBERON:0006240!2.88e-10!39;UBERON:0001049!6.90e-10!52;UBERON:0005068!6.90e-10!52;UBERON:0006241!6.90e-10!52;UBERON:0007135!6.90e-10!52;UBERON:0001017!1.20e-08!73;UBERON:0005743!1.20e-08!73;UBERON:0002791!1.23e-08!29;UBERON:0003528!1.23e-08!29;UBERON:0001893!1.23e-08!29;UBERON:0000073!4.65e-08!75;UBERON:0001016!4.65e-08!75;UBERON:0000153!8.26e-08!94;UBERON:0002020!8.75e-08!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.90e-59,10;UBERON:0000411,6.90e-59,10;UBERON:0001950,6.90e-59,10;UBERON:0002619,2.52e-42,17;UBERON:0000956,3.78e-34,21;UBERON:0001869,3.78e-34,21;UBERON:0000203,3.78e-34,21;UBERON:0003528,1.51e-24,29;UBERON:0002791,1.51e-24,29;UBERON:0001893,1.51e-24,29;UBERON:0002020,7.84e-21,34;UBERON:0002780,4.59e-18,39;UBERON:0001890,4.59e-18,39;UBERON:0006240,4.59e-18,39;UBERON:0003080,1.36e-17,40;UBERON:0003056,2.50e-17,49;UBERON:0002616,3.40e-15,46;UBERON:0000955,7.45e-15,47;UBERON:0006238,7.45e-15,47;UBERON:0001049,2.40e-13,52;UBERON:0005068,2.40e-13,52;UBERON:0006241,2.40e-13,52;UBERON:0007135,2.40e-13,52;UBERON:0002346,4.65e-13,64;UBERON:0003075,4.65e-13,64;UBERON:0007284,4.65e-13,64;UBERON:0000073,8.06e-13,54;UBERON:0010371,2.48e-11,73;UBERON:0001017,3.01e-09,73;UBERON:0001016,5.62e-09,75;UBERON:0010314,8.77e-09,92;UBERON:0004121,1.79e-08,95;UBERON:0000924,1.79e-08,95;UBERON:0006601,1.79e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0.919218786610021,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0,0.41557608911912,0.324482526135515,0.305518091550949,0,0,0,0.650602214813519,0,0.180062129805349,0.90422890701429,0.95251098811859,1.92170580427275,0.843315521037559,0.517406741478031,0.215567992932842,0,0.703804496655795,0,0.556094498451196,0.696504333044333,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,0.514523061896422,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0,0.876767573733936,0,0.642642632843614,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.177340233642274,0.535106452806212,0,0,0,0,0,0,0.322928853391811,0,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.39061315453185,0,0,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,3.22227665555024,2.29158205375759,1.71853182343688,0.685082519770642,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,1.03552062350364,0,0.798049746802062,0.512200817262403,0.486213434136588,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,1.12228454331548,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0.405017814995072,0,0.285650984403804,0,0.122490799214954,0.191690942036473,0.919218786610021,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0,0.41557608911912,0.324482526135515,0.305518091550949,0,0,0,0.650602214813519,0,0.180062129805349,0.90422890701429,0.95251098811859,1.92170580427275,0.843315521037559,0.517406741478031,0.215567992932842,0,0.703804496655795,0,0.556094498451196,0.696504333044333,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,0.514523061896422,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.403367049246685,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0.407302655690628,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0.283076530788832,0,0.876767573733936,0,0.642642632843614,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0,0.214337035031592,0.177340233642274,0.535106452806212,0,0,0,0,0,0,0.322928853391811,0,0,0.164140899745061,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0.234714477291508,0.39061315453185,0,0,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,3.22227665555024,2.29158205375759,1.71853182343688,0.685082519770642,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,1.03552062350364,0,0.798049746802062,0.512200817262403,0.486213434136588,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,1.12228454331548,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0.382576664137687,0.220591419119515,0 | ||
|short_description=p@chr18:77736935..77736948,- | |||
}} | }} |
Latest revision as of 03:45, 6 August 2015
Short description: | p@chr18:77736935..77736948, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:77736935..77736948, - |
Coexpression cluster: | MCL_coexpression_mm9:199 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.90e-59 | 10 |
visual cortex | 6.90e-59 | 10 |
neocortex | 6.90e-59 | 10 |
regional part of cerebral cortex | 2.52e-42 | 17 |
cerebral cortex | 3.78e-34 | 21 |
cerebral hemisphere | 3.78e-34 | 21 |
pallium | 3.78e-34 | 21 |
brain grey matter | 1.51e-24 | 29 |
regional part of telencephalon | 1.51e-24 | 29 |
telencephalon | 1.51e-24 | 29 |
gray matter | 7.84e-21 | 34 |
regional part of forebrain | 4.59e-18 | 39 |
forebrain | 4.59e-18 | 39 |
future forebrain | 4.59e-18 | 39 |
anterior neural tube | 1.36e-17 | 40 |
pre-chordal neural plate | 2.50e-17 | 49 |
regional part of brain | 3.40e-15 | 46 |
brain | 7.45e-15 | 47 |
future brain | 7.45e-15 | 47 |
neural tube | 2.40e-13 | 52 |
neural rod | 2.40e-13 | 52 |
future spinal cord | 2.40e-13 | 52 |
neural keel | 2.40e-13 | 52 |
neurectoderm | 4.65e-13 | 64 |
neural plate | 4.65e-13 | 64 |
presumptive neural plate | 4.65e-13 | 64 |
regional part of nervous system | 8.06e-13 | 54 |
ecto-epithelium | 2.48e-11 | 73 |
central nervous system | 3.01e-09 | 73 |
nervous system | 5.62e-09 | 75 |
structure with developmental contribution from neural crest | 8.77e-09 | 92 |
ectoderm-derived structure | 1.79e-08 | 95 |
ectoderm | 1.79e-08 | 95 |
presumptive ectoderm | 1.79e-08 | 95 |