FFCP PHASE1:Mm9::chr19:10379357..10379444,-: Difference between revisions
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{{FFCP|EntrezGene=269060|HGNC=|MCL_coexpression_id=281|UniProt=Q6WQJ1,A4FU75|association_with_transcript=0bp_to_ENSMUST00000039327,NM_198114,uc008gpm.1,uc008gpn.1_5end|description=CAGE_peak_1_at_Dagla_5end|id=chr19:10379357..10379444,-|ontology_enrichment_celltype=CL:0000221!1.35e-20!44;CL:0000133!1.35e-20!44;CL:0002319!3.37e-20!43;CL:0000055!4.92e-18!50;CL:0000540!2.20e-16!33;CL:0000047!2.20e-16!33;CL:0000031!2.20e-16!33;CL:0000404!2.20e-16!33;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0002321!5.38e-10!70;CL:0000220!5.38e-10!70;CL:0000117!5.39e-10!23;CL:0000337!5.39e-10!23;CL:0000107!1.58e-07!9|ontology_enrichment_celltype_v019_2=CL:0000221,1.07e-20,44;CL:0000133,1.07e-20,44;CL:0002319,2.68e-20,43;CL:0000540,1.84e-16,33;CL:0000047,1.84e-16,33;CL:0000031,1.84e-16,33;CL:0000404,1.84e-16,33;CL:0000393,1.31e-14,39;CL:0000211,1.31e-14,39;CL:0000117,4.87e-10,23;CL:0000337,4.87e-10,23;CL:0002321,9.07e-10,70;CL:0000107,1.47e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.50e-35!75;UBERON:0001016!5.50e-35!75;UBERON:0001017!1.55e-33!73;UBERON:0005743!1.55e-33!73;UBERON:0004121!2.20e-25!102;UBERON:0000924!2.20e-25!102;UBERON:0006601!2.20e-25!102;UBERON:0001049!6.23e-21!52;UBERON:0005068!6.23e-21!52;UBERON:0006241!6.23e-21!52;UBERON:0007135!6.23e-21!52;UBERON:0000955!4.75e-20!50;UBERON:0006238!4.75e-20!50;UBERON:0002616!1.58e-19!49;UBERON:0000033!3.27e-17!63;UBERON:0002346!1.29e-16!71;UBERON:0003075!1.29e-16!71;UBERON:0007284!1.29e-16!71;UBERON:0002020!1.49e-16!34;UBERON:0003080!7.11e-15!40;UBERON:0002780!2.39e-14!39;UBERON:0001890!2.39e-14!39;UBERON:0006240!2.39e-14!39;UBERON:0002791!4.92e-14!29;UBERON:0003528!4.92e-14!29;UBERON:0001893!4.92e-14!29;UBERON:0003056!2.78e-11!49;UBERON:0000956!2.45e-10!21;UBERON:0001869!2.45e-10!21;UBERON:0000203!2.45e-10!21;UBERON:0002619!1.42e-09!17;UBERON:0000010!1.19e-08!11;UBERON:0000468!1.03e-07!333;UBERON:0002410!1.58e-07!9;UBERON:0002021!3.68e-07!10;UBERON:0000411!3.68e-07!10;UBERON:0001950!3.68e-07!10;UBERON:0003076!7.49e-07!12;UBERON:0003057!7.49e-07!12;UBERON:0004111!9.20e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.65e-35,75;UBERON:0001017,1.05e-33,73;UBERON:0004121,9.59e-28,95;UBERON:0000924,9.59e-28,95;UBERON:0006601,9.59e-28,95;UBERON:0000073,2.46e-22,54;UBERON:0001049,4.91e-21,52;UBERON:0005068,4.91e-21,52;UBERON:0006241,4.91e-21,52;UBERON:0007135,4.91e-21,52;UBERON:0002346,5.31e-19,64;UBERON:0003075,5.31e-19,64;UBERON:0007284,5.31e-19,64;UBERON:0000955,2.29e-18,47;UBERON:0006238,2.29e-18,47;UBERON:0002616,7.49e-18,46;UBERON:0010371,3.13e-17,73;UBERON:0002020,1.24e-16,34;UBERON:0003080,6.05e-15,40;UBERON:0002780,2.04e-14,39;UBERON:0001890,2.04e-14,39;UBERON:0006240,2.04e-14,39;UBERON:0003528,4.23e-14,29;UBERON:0002791,4.23e-14,29;UBERON:0001893,4.23e-14,29;UBERON:0010314,5.54e-12,92;UBERON:0003056,2.47e-11,49;UBERON:0000956,2.20e-10,21;UBERON:0001869,2.20e-10,21;UBERON:0000203,2.20e-10,21;UBERON:0002619,1.29e-09,17;UBERON:0000010,1.09e-08,11;UBERON:0002410,1.47e-07,9;UBERON:0002021,3.43e-07,10;UBERON:0000411,3.43e-07,10;UBERON:0001950,3.43e-07,10;UBERON:0003076,7.02e-07,12;UBERON:0003057,7.02e-07,12|phase1_expression=9.92922852049723,2.09385244583617,0.909998478779072,0.90739263392049,1.00179145989269,4.70061961353291,3.50418960893289,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0.84877930359606,10.8004978491859,0,0,0.47997726838022,1.37645568640302,0.57423196411502,0.430761996159075,1.939241094173,3.23039813075836,1.51218077855958,1.77384408524244,0,0,0,2.88851619751275,5.31950865147176,3.67504841272264,0,0,0,0,0,0,4.65818226509636,4.25783111121961,3.30384153891027,13.3006528539167,7.84890562969608,13.8402295122717,11.2769341463084,10.4989816219022,7.18762821824858,0.167782606057736,0,0,4.11615097657515,3.43840127926508,4.64104883049698,14.1621522601718,13.7537654610729,13.9442908771359,11.5207140903505,13.3394219416671,6.29929802096979,5.93319817540185,4.2628806896766,15.8788058574755,5.37905627450176,7.46565208621039,8.50537411489651,3.99617426567626,19.9955689082663,20.0990372265968,6.98197555525238,7.66763768145891,9.19218786610021,31.9336054898227,39.8384494825786,32.7181915835799,12.7929699098288,16.6507511356386,11.9810075228055,18.1468949350898,20.8222165711722,19.2525792198781,22.9810296669461,21.3557521198654,16.0303523409758,33.6224298399337,44.8139351433238,4.92769630792852,3.44169550792555,0.679971333707751,0,0.649776417447669,0.448026887097336,2.94933282276679,6.98764322570037,4.67614808285164,6.00677276667578,11.5491604216878,3.84979432242953,5.09610479413291,0,1.94841936910093,2.02687892380079,3.0331466700887,3.08296475241462,1.03575153458869,3.41416919849097,2.4287945747259,2.74018930480927,3.68984795609694,3.3158980921577,3.41007250693544,3.76999773989026,1.48316980640624,15.0383331196708,0.884610551949874,8.41187619726528,3.5334642953663,1.45462575940567,3.72783522436244,37.1831612204665,44.6121485512659,2.81002760729451,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269060 | |||
|HGNC= | |||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6WQJ1,uniprot:A4FU75 | |||
|association_with_transcript=0bp_to_ENSMUST00000039327,NM_198114,uc008gpm.1,uc008gpn.1_5end | |||
|cluster_id=chr19:10379357..10379444,- | |||
|description=CAGE_peak_1_at_Dagla_5end | |||
|id=chr19:10379357..10379444,- | |||
|ontology_enrichment_celltype=CL:0000221!1.35e-20!44;CL:0000133!1.35e-20!44;CL:0002319!3.37e-20!43;CL:0000055!4.92e-18!50;CL:0000540!2.20e-16!33;CL:0000047!2.20e-16!33;CL:0000031!2.20e-16!33;CL:0000404!2.20e-16!33;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0002321!5.38e-10!70;CL:0000220!5.38e-10!70;CL:0000117!5.39e-10!23;CL:0000337!5.39e-10!23;CL:0000107!1.58e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.07e-20,44;CL:0000133,1.07e-20,44;CL:0002319,2.68e-20,43;CL:0000540,1.84e-16,33;CL:0000047,1.84e-16,33;CL:0000031,1.84e-16,33;CL:0000404,1.84e-16,33;CL:0000393,1.31e-14,39;CL:0000211,1.31e-14,39;CL:0000117,4.87e-10,23;CL:0000337,4.87e-10,23;CL:0002321,9.07e-10,70;CL:0000107,1.47e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.50e-35!75;UBERON:0001016!5.50e-35!75;UBERON:0001017!1.55e-33!73;UBERON:0005743!1.55e-33!73;UBERON:0004121!2.20e-25!102;UBERON:0000924!2.20e-25!102;UBERON:0006601!2.20e-25!102;UBERON:0001049!6.23e-21!52;UBERON:0005068!6.23e-21!52;UBERON:0006241!6.23e-21!52;UBERON:0007135!6.23e-21!52;UBERON:0000955!4.75e-20!50;UBERON:0006238!4.75e-20!50;UBERON:0002616!1.58e-19!49;UBERON:0000033!3.27e-17!63;UBERON:0002346!1.29e-16!71;UBERON:0003075!1.29e-16!71;UBERON:0007284!1.29e-16!71;UBERON:0002020!1.49e-16!34;UBERON:0003080!7.11e-15!40;UBERON:0002780!2.39e-14!39;UBERON:0001890!2.39e-14!39;UBERON:0006240!2.39e-14!39;UBERON:0002791!4.92e-14!29;UBERON:0003528!4.92e-14!29;UBERON:0001893!4.92e-14!29;UBERON:0003056!2.78e-11!49;UBERON:0000956!2.45e-10!21;UBERON:0001869!2.45e-10!21;UBERON:0000203!2.45e-10!21;UBERON:0002619!1.42e-09!17;UBERON:0000010!1.19e-08!11;UBERON:0000468!1.03e-07!333;UBERON:0002410!1.58e-07!9;UBERON:0002021!3.68e-07!10;UBERON:0000411!3.68e-07!10;UBERON:0001950!3.68e-07!10;UBERON:0003076!7.49e-07!12;UBERON:0003057!7.49e-07!12;UBERON:0004111!9.20e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.65e-35,75;UBERON:0001017,1.05e-33,73;UBERON:0004121,9.59e-28,95;UBERON:0000924,9.59e-28,95;UBERON:0006601,9.59e-28,95;UBERON:0000073,2.46e-22,54;UBERON:0001049,4.91e-21,52;UBERON:0005068,4.91e-21,52;UBERON:0006241,4.91e-21,52;UBERON:0007135,4.91e-21,52;UBERON:0002346,5.31e-19,64;UBERON:0003075,5.31e-19,64;UBERON:0007284,5.31e-19,64;UBERON:0000955,2.29e-18,47;UBERON:0006238,2.29e-18,47;UBERON:0002616,7.49e-18,46;UBERON:0010371,3.13e-17,73;UBERON:0002020,1.24e-16,34;UBERON:0003080,6.05e-15,40;UBERON:0002780,2.04e-14,39;UBERON:0001890,2.04e-14,39;UBERON:0006240,2.04e-14,39;UBERON:0003528,4.23e-14,29;UBERON:0002791,4.23e-14,29;UBERON:0001893,4.23e-14,29;UBERON:0010314,5.54e-12,92;UBERON:0003056,2.47e-11,49;UBERON:0000956,2.20e-10,21;UBERON:0001869,2.20e-10,21;UBERON:0000203,2.20e-10,21;UBERON:0002619,1.29e-09,17;UBERON:0000010,1.09e-08,11;UBERON:0002410,1.47e-07,9;UBERON:0002021,3.43e-07,10;UBERON:0000411,3.43e-07,10;UBERON:0001950,3.43e-07,10;UBERON:0003076,7.02e-07,12;UBERON:0003057,7.02e-07,12 | |||
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| |||
|short_description=p1@Dagla | |||
}} |
Revision as of 06:17, 6 August 2015
Short description: | p1@Dagla |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dagla_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 0bp_to_ENSMUST00000039327, NM_198114, uc008gpm.1, uc008gpn.1_5end |
EntrezGene: | 269060 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.07e-20 | 44 |
neurectodermal cell | 1.07e-20 | 44 |
neural cell | 2.68e-20 | 43 |
neuron | 1.84e-16 | 33 |
neuronal stem cell | 1.84e-16 | 33 |
neuroblast | 1.84e-16 | 33 |
electrically signaling cell | 1.84e-16 | 33 |
electrically responsive cell | 1.31e-14 | 39 |
electrically active cell | 1.31e-14 | 39 |
CNS neuron (sensu Vertebrata) | 4.87e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.87e-10 | 23 |
embryonic cell | 9.07e-10 | 70 |
autonomic neuron | 1.47e-07 | 9 |