FFCP PHASE1:Mm9::chr11:69139754..69139777,+: Difference between revisions
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{{FFCP|EntrezGene=16499|HGNC=|MCL_coexpression_id=1|UniProt=Q8VD73,Q8C439,Q8C7S9|association_with_transcript=0bp_to_ENSMUST00000018614,NM_010599,uc007jps.1_5end|description=CAGE_peak_2_at_Kcnab3_5end|id=chr11:69139754..69139777,+|ontology_enrichment_celltype=CL:0000117!9.91e-12!23;CL:0000337!9.91e-12!23;CL:0000221!1.62e-09!44;CL:0000133!1.62e-09!44;CL:0002319!2.35e-09!43;CL:0000540!2.82e-09!33;CL:0000047!2.82e-09!33;CL:0000031!2.82e-09!33;CL:0000404!2.82e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-15,23;CL:0000337,1.72e-15,23;CL:0000540,1.30e-10,33;CL:0000047,1.30e-10,33;CL:0000031,1.30e-10,33;CL:0000404,1.30e-10,33;CL:0000221,8.67e-10,44;CL:0000133,8.67e-10,44;CL:0002319,1.43e-09,43;CL:0000393,1.31e-07,39;CL:0000211,1.31e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.15e-24!102;UBERON:0000924!3.15e-24!102;UBERON:0006601!3.15e-24!102;UBERON:0000073!5.95e-24!75;UBERON:0001016!5.95e-24!75;UBERON:0000033!1.01e-23!63;UBERON:0001017!1.17e-23!73;UBERON:0005743!1.17e-23!73;UBERON:0002346!3.70e-23!71;UBERON:0003075!3.70e-23!71;UBERON:0007284!3.70e-23!71;UBERON:0001049!2.82e-21!52;UBERON:0005068!2.82e-21!52;UBERON:0006241!2.82e-21!52;UBERON:0007135!2.82e-21!52;UBERON:0000955!7.18e-21!50;UBERON:0006238!7.18e-21!50;UBERON:0002616!3.98e-20!49;UBERON:0003056!3.36e-17!49;UBERON:0002020!2.60e-15!34;UBERON:0003080!8.74e-15!40;UBERON:0000153!4.05e-14!94;UBERON:0002780!4.15e-14!39;UBERON:0001890!4.15e-14!39;UBERON:0006240!4.15e-14!39;UBERON:0007811!1.24e-13!86;UBERON:0002791!6.69e-13!29;UBERON:0003528!6.69e-13!29;UBERON:0001893!6.69e-13!29;UBERON:0000956!1.59e-09!21;UBERON:0001869!1.59e-09!21;UBERON:0000203!1.59e-09!21;UBERON:0002619!1.57e-07!17;UBERON:0003076!2.55e-07!12;UBERON:0003057!2.55e-07!12;UBERON:0002021!2.68e-07!10;UBERON:0000411!2.68e-07!10;UBERON:0001950!2.68e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.89e-31,54;UBERON:0002346,4.97e-31,64;UBERON:0003075,4.97e-31,64;UBERON:0007284,4.97e-31,64;UBERON:0004121,1.29e-29,95;UBERON:0000924,1.29e-29,95;UBERON:0006601,1.29e-29,95;UBERON:0001049,2.13e-29,52;UBERON:0005068,2.13e-29,52;UBERON:0006241,2.13e-29,52;UBERON:0007135,2.13e-29,52;UBERON:0001017,2.45e-29,73;UBERON:0001016,5.97e-29,75;UBERON:0010371,1.68e-28,73;UBERON:0000955,7.28e-26,47;UBERON:0006238,7.28e-26,47;UBERON:0002616,7.33e-25,46;UBERON:0003056,2.61e-23,49;UBERON:0010314,5.15e-21,92;UBERON:0002020,9.40e-21,34;UBERON:0003080,2.03e-20,40;UBERON:0002780,1.76e-19,39;UBERON:0001890,1.76e-19,39;UBERON:0006240,1.76e-19,39;UBERON:0003528,1.94e-17,29;UBERON:0002791,1.94e-17,29;UBERON:0001893,1.94e-17,29;UBERON:0000956,8.34e-13,21;UBERON:0001869,8.34e-13,21;UBERON:0000203,8.34e-13,21;UBERON:0002619,4.56e-10,17;UBERON:0003076,1.86e-09,12;UBERON:0003057,1.86e-09,12;UBERON:0002021,1.99e-09,10;UBERON:0000411,1.99e-09,10;UBERON:0001950,1.99e-09,10;UBERON:0004111,3.36e-07,122;UBERON:0000025,5.79e-07,114|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0.140788722151667,0,0,0,0,0.437102012094987,0,0,0,0,0,0,3.57181818634493,0.0992909512008853,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0.443461021310609,1.27006134691926,0.61506478758457,0,0,0,0,0,0.7813353445238,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,1.56478268869608,2.18025156380447,0,0.58328969722285,0.839918529752175,1.43752564364972,0,0,0,0,0,0.515672092277442,1.61853168687678,2.11596391708813,5.07065122804943,0.677689064138264,1.77858959222228,0.449949858640699,0,0.7104801149461,0.898800331555214,1.15265491596466,3.11068836925433,3.51015439662396,3.99617426567626,4.85606673486466,4.19650227808066,4.40966877173835,2.1086003624012,2.75765635983006,33.0347642998166,25.154405602782,20.4296689230804,1.84640802822271,1.00636407962651,2.08365348222704,24.0097379141188,12.9435400307286,11.1542720877071,2.94628585473668,3.13217697758026,2.60959224155421,1.21161909333094,0.982430281388212,0.289864488701678,0,0,1.07940638327563,0,0.448026887097336,0.983110940922263,0.852151612890289,0.779358013808606,1.06001872353102,1.12674735821344,2.56652954828636,2.54805239706646,0,0.649473123033642,0.253359865475099,0,1.1418387971906,0.258937883647172,2.52351636410202,1.04091196059682,0.608930956624282,0.230615497256059,0.452167921657868,1.05829836422134,1.75933227861546,0,0.722996784599558,0,0.161766849947409,0.220841518460394,0,1.86391761218122,14.9318206475889,9.42510180660548,1.27728527604296,0.11981512450592,0,0,29.9581278809645,10.980014467647,2.1361239859187,17.9039049798045,10.4843337505436,14.3373750746096,11.1946471516753,0.407357455401265,0.870848794270651,1.0108910337347,4.41927897361595,0.650602214813519,1.14951052216736,1.0803727788321,1.05493372485001,2.65342346690179,3.58718416797579,2.43624483855295,2.84573707812917,0.862271971731369,1.70195472151037,0.703804496655795,0.876782929710299,1.11218899690239,1.0447564995665,1.23469281844766,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,0.540186184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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16499 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8VD73,uniprot:Q8C439,uniprot:Q8C7S9 | |||
|association_with_transcript=0bp_to_ENSMUST00000018614,NM_010599,uc007jps.1_5end | |||
|cluster_id=chr11:69139754..69139777,+ | |||
|description=CAGE_peak_2_at_Kcnab3_5end | |||
|id=chr11:69139754..69139777,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.91e-12!23;CL:0000337!9.91e-12!23;CL:0000221!1.62e-09!44;CL:0000133!1.62e-09!44;CL:0002319!2.35e-09!43;CL:0000540!2.82e-09!33;CL:0000047!2.82e-09!33;CL:0000031!2.82e-09!33;CL:0000404!2.82e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-15,23;CL:0000337,1.72e-15,23;CL:0000540,1.30e-10,33;CL:0000047,1.30e-10,33;CL:0000031,1.30e-10,33;CL:0000404,1.30e-10,33;CL:0000221,8.67e-10,44;CL:0000133,8.67e-10,44;CL:0002319,1.43e-09,43;CL:0000393,1.31e-07,39;CL:0000211,1.31e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.15e-24!102;UBERON:0000924!3.15e-24!102;UBERON:0006601!3.15e-24!102;UBERON:0000073!5.95e-24!75;UBERON:0001016!5.95e-24!75;UBERON:0000033!1.01e-23!63;UBERON:0001017!1.17e-23!73;UBERON:0005743!1.17e-23!73;UBERON:0002346!3.70e-23!71;UBERON:0003075!3.70e-23!71;UBERON:0007284!3.70e-23!71;UBERON:0001049!2.82e-21!52;UBERON:0005068!2.82e-21!52;UBERON:0006241!2.82e-21!52;UBERON:0007135!2.82e-21!52;UBERON:0000955!7.18e-21!50;UBERON:0006238!7.18e-21!50;UBERON:0002616!3.98e-20!49;UBERON:0003056!3.36e-17!49;UBERON:0002020!2.60e-15!34;UBERON:0003080!8.74e-15!40;UBERON:0000153!4.05e-14!94;UBERON:0002780!4.15e-14!39;UBERON:0001890!4.15e-14!39;UBERON:0006240!4.15e-14!39;UBERON:0007811!1.24e-13!86;UBERON:0002791!6.69e-13!29;UBERON:0003528!6.69e-13!29;UBERON:0001893!6.69e-13!29;UBERON:0000956!1.59e-09!21;UBERON:0001869!1.59e-09!21;UBERON:0000203!1.59e-09!21;UBERON:0002619!1.57e-07!17;UBERON:0003076!2.55e-07!12;UBERON:0003057!2.55e-07!12;UBERON:0002021!2.68e-07!10;UBERON:0000411!2.68e-07!10;UBERON:0001950!2.68e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.89e-31,54;UBERON:0002346,4.97e-31,64;UBERON:0003075,4.97e-31,64;UBERON:0007284,4.97e-31,64;UBERON:0004121,1.29e-29,95;UBERON:0000924,1.29e-29,95;UBERON:0006601,1.29e-29,95;UBERON:0001049,2.13e-29,52;UBERON:0005068,2.13e-29,52;UBERON:0006241,2.13e-29,52;UBERON:0007135,2.13e-29,52;UBERON:0001017,2.45e-29,73;UBERON:0001016,5.97e-29,75;UBERON:0010371,1.68e-28,73;UBERON:0000955,7.28e-26,47;UBERON:0006238,7.28e-26,47;UBERON:0002616,7.33e-25,46;UBERON:0003056,2.61e-23,49;UBERON:0010314,5.15e-21,92;UBERON:0002020,9.40e-21,34;UBERON:0003080,2.03e-20,40;UBERON:0002780,1.76e-19,39;UBERON:0001890,1.76e-19,39;UBERON:0006240,1.76e-19,39;UBERON:0003528,1.94e-17,29;UBERON:0002791,1.94e-17,29;UBERON:0001893,1.94e-17,29;UBERON:0000956,8.34e-13,21;UBERON:0001869,8.34e-13,21;UBERON:0000203,8.34e-13,21;UBERON:0002619,4.56e-10,17;UBERON:0003076,1.86e-09,12;UBERON:0003057,1.86e-09,12;UBERON:0002021,1.99e-09,10;UBERON:0000411,1.99e-09,10;UBERON:0001950,1.99e-09,10;UBERON:0004111,3.36e-07,122;UBERON:0000025,5.79e-07,114 | |||
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| |||
|short_description=p2@Kcnab3 | |||
}} |
Revision as of 09:41, 6 August 2015
Short description: | p2@Kcnab3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnab3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000018614, NM_010599, uc007jps.1_5end |
EntrezGene: | 16499 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.72e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-15 | 23 |
neuron | 1.30e-10 | 33 |
neuronal stem cell | 1.30e-10 | 33 |
neuroblast | 1.30e-10 | 33 |
electrically signaling cell | 1.30e-10 | 33 |
ectodermal cell | 8.67e-10 | 44 |
neurectodermal cell | 8.67e-10 | 44 |
neural cell | 1.43e-09 | 43 |
electrically responsive cell | 1.31e-07 | 39 |
electrically active cell | 1.31e-07 | 39 |