FFCP PHASE1:Mm9::chr5:135028323..135028346,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=269713|HGNC=|MCL_coexpression_id=22|UniProt=Q9Z0H8|association_with_transcript=-19bp_to_ENSMUST00000036999,ENSMUST00000100647,NM_001039162,NM_009990,uc008zwi.1,uc008zwj.1_5end|description=CAGE_peak_5_at_Clip2_5end|id=chr5:135028323..135028346,-|ontology_enrichment_celltype=CL:0000117!2.45e-15!23;CL:0000337!2.45e-15!23;CL:0000540!2.84e-14!33;CL:0000047!2.84e-14!33;CL:0000031!2.84e-14!33;CL:0000404!2.84e-14!33;CL:0002319!8.78e-11!43;CL:0000393!1.29e-10!39;CL:0000211!1.29e-10!39;CL:0000221!1.62e-10!44;CL:0000133!1.62e-10!44;CL:0000055!9.67e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.93e-27,23;CL:0000337,4.93e-27,23;CL:0000540,4.68e-22,33;CL:0000047,4.68e-22,33;CL:0000031,4.68e-22,33;CL:0000404,4.68e-22,33;CL:0002319,2.67e-17,43;CL:0000393,3.10e-17,39;CL:0000211,3.10e-17,39;CL:0000221,1.09e-16,44;CL:0000133,1.09e-16,44;CL:0002609,1.04e-08,6;CL:0002321,3.24e-07,70;CL:0000723,4.10e-07,91;CL:0000048,4.10e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.71e-16!75;UBERON:0001016!1.71e-16!75;UBERON:0001017!4.03e-16!73;UBERON:0005743!4.03e-16!73;UBERON:0002346!1.07e-13!71;UBERON:0003075!1.07e-13!71;UBERON:0007284!1.07e-13!71;UBERON:0004121!2.06e-13!102;UBERON:0000924!2.06e-13!102;UBERON:0006601!2.06e-13!102;UBERON:0000033!3.30e-13!63;UBERON:0003056!4.76e-13!49;UBERON:0001049!3.54e-12!52;UBERON:0005068!3.54e-12!52;UBERON:0006241!3.54e-12!52;UBERON:0007135!3.54e-12!52;UBERON:0000955!1.92e-11!50;UBERON:0006238!1.92e-11!50;UBERON:0002020!2.88e-11!34;UBERON:0002616!6.71e-11!49;UBERON:0003080!5.68e-10!40;UBERON:0000153!8.04e-10!94;UBERON:0002780!1.86e-09!39;UBERON:0001890!1.86e-09!39;UBERON:0006240!1.86e-09!39;UBERON:0007811!2.46e-09!86;UBERON:0002791!1.03e-08!29;UBERON:0003528!1.03e-08!29;UBERON:0001893!1.03e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.43e-23,73;UBERON:0004121,3.09e-22,95;UBERON:0000924,3.09e-22,95;UBERON:0006601,3.09e-22,95;UBERON:0001016,4.46e-22,75;UBERON:0002020,4.91e-22,34;UBERON:0002346,5.82e-20,64;UBERON:0003075,5.82e-20,64;UBERON:0007284,5.82e-20,64;UBERON:0003056,7.29e-20,49;UBERON:0000073,7.33e-20,54;UBERON:0003528,3.85e-17,29;UBERON:0002791,3.85e-17,29;UBERON:0001893,3.85e-17,29;UBERON:0010371,7.37e-17,73;UBERON:0001049,9.87e-17,52;UBERON:0005068,9.87e-17,52;UBERON:0006241,9.87e-17,52;UBERON:0007135,9.87e-17,52;UBERON:0003080,4.18e-15,40;UBERON:0002780,3.38e-14,39;UBERON:0001890,3.38e-14,39;UBERON:0006240,3.38e-14,39;UBERON:0000955,5.60e-14,47;UBERON:0006238,5.60e-14,47;UBERON:0002616,4.29e-13,46;UBERON:0010314,1.46e-11,92;UBERON:0002420,5.69e-10,8;UBERON:0007245,5.69e-10,8;UBERON:0010009,5.69e-10,8;UBERON:0010011,5.69e-10,8;UBERON:0000454,5.69e-10,8;UBERON:0000956,2.27e-09,21;UBERON:0001869,2.27e-09,21;UBERON:0000203,2.27e-09,21;UBERON:0000369,2.59e-07,5;UBERON:0002435,2.59e-07,5;UBERON:0000204,2.59e-07,5;UBERON:0010082,2.59e-07,5|phase1_expression=1.12104192973356,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0.467225281191051,0.903863264091034,0,0,0.171217968225505,0.0797721589953364,0,0.437102012094987,0,0,0,0.473193248037357,0,0,0.595303031057488,0.198581902401771,0.261199789138935,0.159992422793407,0,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0.288851619751275,0,0,1.25559489221072,0.7813353445238,0,0.588231488031014,2.04913645487534,1.94204141212461,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0.515672092277442,10.5204559646991,11.1088105647127,12.6766280701236,0.338844532069132,0,4.04954872776629,1.97773272513395,1.4209602298922,1.49800055259202,1.15265491596466,4.14758449233911,5.94026128659439,6.94072372459561,1.71390590642282,1.32521124570968,7.7169203505421,6.22995561618536,6.43453150627015,3.30347642998166,1.78762273319263,1.53606533256243,9.62769900430415,9.42322729104819,7.29278718779464,1.67509799400829,1.68828783009504,2.44477196442896,3.24091444021034,2.56269025438385,7.26957838718672,0.757261933331841,0.831287161174641,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0.258937883647172,1.1875371125186,0.693941307064543,0,0.230615497256059,0.150722640552623,0.117588707135705,0.502666365318702,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.510914110417183,0.359445373517761,0,0,2.69623150928681,1.83000241127451,3.5183218591602,1.73824320192276,0.511430914660661,1.24672826735736,1.1356888414743,0.101839363850316,0.248813941220186,0,1.05220927943237,1.04096354370163,0.689706313300419,1.98068342785884,1.20563854268572,1.2246569847239,1.5373646434182,1.40552586839593,1.29351685369508,4.095791865724,1.13463648100692,0.527853372491847,0.876782929710299,0,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0.828503090142008,0,0.36012412292203,0.710234206755631,0.393528463494808,0,0,0,0.116765342367169,0.329119699826961,0,0,0.146199987425332,0,0.268412837520744,1.05144974282064,2.57261530948211,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0.605050573870028,0.889512175379481,0.380451252225118,0,0.658795818896044,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,0,0.569003702859245,0.685491075658373,2.25415471346161,0.407302655690628,0.581857461502877,0.350679099451593,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.184753190166605,0.947457058852424,0.488894929326078,0.678980343100753,0.469380496577004,0.670025029767263,0.952174563544055,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,1.63171705145613,0,0,1.28440471990234,0.937693492737625,0.163934945376675,0.252470927204373,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0.891194696329576,1.13230612315533,1.21443210502468,1.16902343164525,0,3.85585579706168,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,1.4229455216103,0.857348140126369,0.354680467284547,0.713475270408282,0.658196082408484,0.304464949114599,1.17335854031855,4.44847348814022,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.927126510052548,0.341741761595705,0,0.740778109478847,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,1.26534397432454,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.897099276263873,0.496375471371293,0.777804753376191,0.774958940866387,0,0.234714477291508,0.39061315453185,0.524296722128554,0,0,0.948033361884535,0.810900861160657,0.205421914329655,0.25984164595559,0.179026695667481,0.79472541912506,0.841368146639782,0.738447635872886,0.302899349844443,0.457240839929999,0.705783295957884,0.487289403698762,0.769694733122636,0.350630706544707,0,0.665957860122194,0.62799699626633,1.34307693091263,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,1.6942555278512,0,1.14579102687879,1.20297227640581,2.74033007908257,0,0.675022500231806,1.35096360967266,0,1.03552062350364,2.07574695168353,1.59609949360412,1.53660245178721,1.45864030240976,1.46729213839588,1.47074806760011,0.888986911206461,0.824140228955577,0.320919209591815,1.01078884705519,0.50695859978048,0.565879024158229,0.749132059759059,1.08842759088278,0.918967503289812,0,0.811190281613988,0.38581844092741,2.47251540481984,0.588795680537589,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,1.41164070622996,0.761531471025089,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,1.42362021749009,1.28055827088233,0.818462086339379,0.619747364743864,0.964533054905707,2.74791635731741,0.935726433781634,0.429742108096597,0.191288332068843,0.882365676478062,0|short_description=p5@Clip2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269713 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z0H8 | |||
|association_with_transcript=-19bp_to_ENSMUST00000036999,ENSMUST00000100647,NM_001039162,NM_009990,uc008zwi.1,uc008zwj.1_5end | |||
|cluster_id=chr5:135028323..135028346,- | |||
|description=CAGE_peak_5_at_Clip2_5end | |||
|id=chr5:135028323..135028346,- | |||
|ontology_enrichment_celltype=CL:0000117!2.45e-15!23;CL:0000337!2.45e-15!23;CL:0000540!2.84e-14!33;CL:0000047!2.84e-14!33;CL:0000031!2.84e-14!33;CL:0000404!2.84e-14!33;CL:0002319!8.78e-11!43;CL:0000393!1.29e-10!39;CL:0000211!1.29e-10!39;CL:0000221!1.62e-10!44;CL:0000133!1.62e-10!44;CL:0000055!9.67e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.93e-27,23;CL:0000337,4.93e-27,23;CL:0000540,4.68e-22,33;CL:0000047,4.68e-22,33;CL:0000031,4.68e-22,33;CL:0000404,4.68e-22,33;CL:0002319,2.67e-17,43;CL:0000393,3.10e-17,39;CL:0000211,3.10e-17,39;CL:0000221,1.09e-16,44;CL:0000133,1.09e-16,44;CL:0002609,1.04e-08,6;CL:0002321,3.24e-07,70;CL:0000723,4.10e-07,91;CL:0000048,4.10e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.71e-16!75;UBERON:0001016!1.71e-16!75;UBERON:0001017!4.03e-16!73;UBERON:0005743!4.03e-16!73;UBERON:0002346!1.07e-13!71;UBERON:0003075!1.07e-13!71;UBERON:0007284!1.07e-13!71;UBERON:0004121!2.06e-13!102;UBERON:0000924!2.06e-13!102;UBERON:0006601!2.06e-13!102;UBERON:0000033!3.30e-13!63;UBERON:0003056!4.76e-13!49;UBERON:0001049!3.54e-12!52;UBERON:0005068!3.54e-12!52;UBERON:0006241!3.54e-12!52;UBERON:0007135!3.54e-12!52;UBERON:0000955!1.92e-11!50;UBERON:0006238!1.92e-11!50;UBERON:0002020!2.88e-11!34;UBERON:0002616!6.71e-11!49;UBERON:0003080!5.68e-10!40;UBERON:0000153!8.04e-10!94;UBERON:0002780!1.86e-09!39;UBERON:0001890!1.86e-09!39;UBERON:0006240!1.86e-09!39;UBERON:0007811!2.46e-09!86;UBERON:0002791!1.03e-08!29;UBERON:0003528!1.03e-08!29;UBERON:0001893!1.03e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.43e-23,73;UBERON:0004121,3.09e-22,95;UBERON:0000924,3.09e-22,95;UBERON:0006601,3.09e-22,95;UBERON:0001016,4.46e-22,75;UBERON:0002020,4.91e-22,34;UBERON:0002346,5.82e-20,64;UBERON:0003075,5.82e-20,64;UBERON:0007284,5.82e-20,64;UBERON:0003056,7.29e-20,49;UBERON:0000073,7.33e-20,54;UBERON:0003528,3.85e-17,29;UBERON:0002791,3.85e-17,29;UBERON:0001893,3.85e-17,29;UBERON:0010371,7.37e-17,73;UBERON:0001049,9.87e-17,52;UBERON:0005068,9.87e-17,52;UBERON:0006241,9.87e-17,52;UBERON:0007135,9.87e-17,52;UBERON:0003080,4.18e-15,40;UBERON:0002780,3.38e-14,39;UBERON:0001890,3.38e-14,39;UBERON:0006240,3.38e-14,39;UBERON:0000955,5.60e-14,47;UBERON:0006238,5.60e-14,47;UBERON:0002616,4.29e-13,46;UBERON:0010314,1.46e-11,92;UBERON:0002420,5.69e-10,8;UBERON:0007245,5.69e-10,8;UBERON:0010009,5.69e-10,8;UBERON:0010011,5.69e-10,8;UBERON:0000454,5.69e-10,8;UBERON:0000956,2.27e-09,21;UBERON:0001869,2.27e-09,21;UBERON:0000203,2.27e-09,21;UBERON:0000369,2.59e-07,5;UBERON:0002435,2.59e-07,5;UBERON:0000204,2.59e-07,5;UBERON:0010082,2.59e-07,5 | |||
|phase1_expression=1.12104192973356,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0.467225281191051,0.903863264091034,0,0,0.171217968225505,0.0797721589953364,0,0.437102012094987,0,0,0,0.473193248037357,0,0,0.595303031057488,0.198581902401771,0.261199789138935,0.159992422793407,0,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0.288851619751275,0,0,1.25559489221072,0.7813353445238,0,0.588231488031014,2.04913645487534,1.94204141212461,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0.515672092277442,10.5204559646991,11.1088105647127,12.6766280701236,0.338844532069132,0,4.04954872776629,1.97773272513395,1.4209602298922,1.49800055259202,1.15265491596466,4.14758449233911,5.94026128659439,6.94072372459561,1.71390590642282,1.32521124570968,7.7169203505421,6.22995561618536,6.43453150627015,3.30347642998166,1.78762273319263,1.53606533256243,9.62769900430415,9.42322729104819,7.29278718779464,1.67509799400829,1.68828783009504,2.44477196442896,3.24091444021034,2.56269025438385,7.26957838718672,0.757261933331841,0.831287161174641,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0.258937883647172,1.1875371125186,0.693941307064543,0,0.230615497256059,0.150722640552623,0.117588707135705,0.502666365318702,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0.83778682725382,0.510914110417183,0.359445373517761,0,0,2.69623150928681,1.83000241127451,3.5183218591602,1.73824320192276,0.511430914660661,1.24672826735736,1.1356888414743,0.101839363850316,0.248813941220186,0,1.05220927943237,1.04096354370163,0.689706313300419,1.98068342785884,1.20563854268572,1.2246569847239,1.5373646434182,1.40552586839593,1.29351685369508,4.095791865724,1.13463648100692,0.527853372491847,0.876782929710299,0,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0.828503090142008,0,0.36012412292203,0.710234206755631,0.393528463494808,0,0,0,0.116765342367169,0.329119699826961,0,0,0.146199987425332,0,0.268412837520744,1.05144974282064,2.57261530948211,0,0,0.853153002140936,0.696710015581316,0.38660238396628,0.605050573870028,0.889512175379481,0.380451252225118,0,0.658795818896044,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,0,0.569003702859245,0.685491075658373,2.25415471346161,0.407302655690628,0.581857461502877,0.350679099451593,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.184753190166605,0.947457058852424,0.488894929326078,0.678980343100753,0.469380496577004,0.670025029767263,0.952174563544055,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,1.63171705145613,0,0,1.28440471990234,0.937693492737625,0.163934945376675,0.252470927204373,0.94652465824877,0.390438744296638,0.215423397732799,0.477937595905104,0.891194696329576,1.13230612315533,1.21443210502468,1.16902343164525,0,3.85585579706168,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,1.4229455216103,0.857348140126369,0.354680467284547,0.713475270408282,0.658196082408484,0.304464949114599,1.17335854031855,4.44847348814022,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.927126510052548,0.341741761595705,0,0.740778109478847,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,1.26534397432454,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.897099276263873,0.496375471371293,0.777804753376191,0.774958940866387,0,0.234714477291508,0.39061315453185,0.524296722128554,0,0,0.948033361884535,0.810900861160657,0.205421914329655,0.25984164595559,0.179026695667481,0.79472541912506,0.841368146639782,0.738447635872886,0.302899349844443,0.457240839929999,0.705783295957884,0.487289403698762,0.769694733122636,0.350630706544707,0,0.665957860122194,0.62799699626633,1.34307693091263,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,1.6942555278512,0,1.14579102687879,1.20297227640581,2.74033007908257,0,0.675022500231806,1.35096360967266,0,1.03552062350364,2.07574695168353,1.59609949360412,1.53660245178721,1.45864030240976,1.46729213839588,1.47074806760011,0.888986911206461,0.824140228955577,0.320919209591815,1.01078884705519,0.50695859978048,0.565879024158229,0.749132059759059,1.08842759088278,0.918967503289812,0,0.811190281613988,0.38581844092741,2.47251540481984,0.588795680537589,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,1.41164070622996,0.761531471025089,0.73171189149109,0.263069711437843,1.08643291076689,1.12228454331548,1.42362021749009,1.28055827088233,0.818462086339379,0.619747364743864,0.964533054905707,2.74791635731741,0.935726433781634,0.429742108096597,0.191288332068843,0.882365676478062,0 | |||
|short_description=p5@Clip2 | |||
}} |
Revision as of 09:42, 6 August 2015
Short description: | p5@Clip2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Clip2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -19bp_to_ENSMUST00000036999, ENSMUST00000100647, NM_001039162, NM_009990, uc008zwi.1, uc008zwj.1_5end |
EntrezGene: | 269713 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.93e-27 | 23 |
neuroblast (sensu Vertebrata) | 4.93e-27 | 23 |
neuron | 4.68e-22 | 33 |
neuronal stem cell | 4.68e-22 | 33 |
neuroblast | 4.68e-22 | 33 |
electrically signaling cell | 4.68e-22 | 33 |
neural cell | 2.67e-17 | 43 |
electrically responsive cell | 3.10e-17 | 39 |
electrically active cell | 3.10e-17 | 39 |
ectodermal cell | 1.09e-16 | 44 |
neurectodermal cell | 1.09e-16 | 44 |
neuron of cerebral cortex | 1.04e-08 | 6 |
embryonic cell | 3.24e-07 | 70 |
somatic stem cell | 4.10e-07 | 91 |
multi fate stem cell | 4.10e-07 | 91 |