FFCP PHASE1:Hg19::chr2:233562028..233562056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26058 | |EntrezGene=26058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11960 | |HGNC=11960 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBB0,A6H8W4,Q6Y7W6,C9JPV7,C9JHW1,C9JXQ0,C9JHT0,F5H3C2 | |UniProt=E9PBB0,A6H8W4,Q6Y7W6,C9JPV7,C9JHW1,C9JXQ0,C9JHT0,F5H3C2 | ||
|association_with_transcript=0bp_to_ENST00000409196,ENST00000409451,ENST00000409547,ENST00000421433,ENST00000423659,ENST00000425040,ENST00000430720,ENST00000464402,ENST00000475359,ENST00000484409,ENST00000488629,ENST00000488734,ENST00000490612,ENST00000492910,ENST00000535418_5end | |association_with_transcript=0bp_to_ENST00000409196,ENST00000409451,ENST00000409547,ENST00000421433,ENST00000423659,ENST00000425040,ENST00000430720,ENST00000464402,ENST00000475359,ENST00000484409,ENST00000488629,ENST00000488734,ENST00000490612,ENST00000492910,ENST00000535418_5end | ||
|cluster_id=chr2:233562028..233562056,+ | |||
|coexpression_cluster_id=C2166 | |coexpression_cluster_id=C2166 | ||
|description=CAGE_peak_1_at_GIGYF2_5end | |description=CAGE_peak_1_at_GIGYF2_5end | ||
|id=chr2:233562028..233562056,+ | |id=chr2:233562028..233562056,+ | ||
|ontology_enrichment_celltype=CL:0000839!2.24e-08!70;CL:0002057!3.63e-08!42;CL:0000557!7.02e-08!71;CL:0000860!2.26e-07!45;CL:0000763!2.82e-07!112;CL:0000049!2.82e-07!112;CL:0000766!6.24e-07!76 | |ontology_enrichment_celltype=CL:0000839!2.24e-08!70;CL:0002057!3.63e-08!42;CL:0000557!7.02e-08!71;CL:0000860!2.26e-07!45;CL:0000763!2.82e-07!112;CL:0000049!2.82e-07!112;CL:0000766!6.24e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.90e-09;33!CL:0002057;1.90e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,3.69e-09,66;CL:0000557,1.30e-08,67;CL:0000860,3.63e-08,42;CL:0002057,3.63e-08,42;CL:0000763,9.31e-08,108;CL:0000049,9.31e-08,108;CL:0000766,1.49e-07,72;CL:0002194,3.40e-07,59;CL:0000576,3.40e-07,59;CL:0000040,3.40e-07,59;CL:0000559,3.40e-07,59;CL:0002009,3.77e-07,61;CL:0000473,6.02e-07,48;CL:0000234,6.02e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.02e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-40!115;UBERON:0001049!2.66e-22!57;UBERON:0005068!2.66e-22!57;UBERON:0006241!2.66e-22!57;UBERON:0007135!2.66e-22!57;UBERON:0003080!1.29e-19!42;UBERON:0002780!3.45e-19!41;UBERON:0001890!3.45e-19!41;UBERON:0006240!3.45e-19!41;UBERON:0001017!2.25e-18!82;UBERON:0002616!4.33e-18!59;UBERON:0000955!1.17e-17!69;UBERON:0006238!1.17e-17!69;UBERON:0005743!1.61e-17!86;UBERON:0000073!5.15e-16!94;UBERON:0001016!5.15e-16!94;UBERON:0002020!3.33e-15!34;UBERON:0003528!3.33e-15!34;UBERON:0001893!3.41e-15!34;UBERON:0002791!9.01e-15!33;UBERON:0001869!4.91e-14!32;UBERON:0002346!3.00e-13!90;UBERON:0003075!9.93e-13!86;UBERON:0007284!9.93e-13!86;UBERON:0002619!1.32e-12!22;UBERON:0001950!1.93e-11!20;UBERON:0000956!1.24e-10!25;UBERON:0000203!1.24e-10!25;UBERON:0003056!3.33e-09!61;UBERON:0000153!4.83e-09!129;UBERON:0007811!4.83e-09!129;UBERON:0000033!4.26e-08!123;UBERON:0000924!5.18e-08!173;UBERON:0006601!5.18e-08!173;UBERON:0004121!1.42e-07!169;UBERON:0000062!5.88e-07!511;UBERON:0002390!9.49e-07!102;UBERON:0003061!9.49e-07!102 | |ontology_enrichment_uberon=UBERON:0007023!2.88e-40!115;UBERON:0001049!2.66e-22!57;UBERON:0005068!2.66e-22!57;UBERON:0006241!2.66e-22!57;UBERON:0007135!2.66e-22!57;UBERON:0003080!1.29e-19!42;UBERON:0002780!3.45e-19!41;UBERON:0001890!3.45e-19!41;UBERON:0006240!3.45e-19!41;UBERON:0001017!2.25e-18!82;UBERON:0002616!4.33e-18!59;UBERON:0000955!1.17e-17!69;UBERON:0006238!1.17e-17!69;UBERON:0005743!1.61e-17!86;UBERON:0000073!5.15e-16!94;UBERON:0001016!5.15e-16!94;UBERON:0002020!3.33e-15!34;UBERON:0003528!3.33e-15!34;UBERON:0001893!3.41e-15!34;UBERON:0002791!9.01e-15!33;UBERON:0001869!4.91e-14!32;UBERON:0002346!3.00e-13!90;UBERON:0003075!9.93e-13!86;UBERON:0007284!9.93e-13!86;UBERON:0002619!1.32e-12!22;UBERON:0001950!1.93e-11!20;UBERON:0000956!1.24e-10!25;UBERON:0000203!1.24e-10!25;UBERON:0003056!3.33e-09!61;UBERON:0000153!4.83e-09!129;UBERON:0007811!4.83e-09!129;UBERON:0000033!4.26e-08!123;UBERON:0000924!5.18e-08!173;UBERON:0006601!5.18e-08!173;UBERON:0004121!1.42e-07!169;UBERON:0000062!5.88e-07!511;UBERON:0002390!9.49e-07!102;UBERON:0003061!9.49e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.18e-14;41!UBERON:0001890;4.18e-14;41!UBERON:0003528;6.14e-13;34!UBERON:0002020;6.14e-13;34!UBERON:0001893;7.70e-13;34!UBERON:0002791;8.85e-13;32!UBERON:0001869;1.12e-12;32!UBERON:0002619;1.43e-12;22!UBERON:0000073;2.53e-12;53!UBERON:0002616;2.53e-12;53!UBERON:0007023;8.47e-12;114!UBERON:0001950;2.11e-11;20!UBERON:0000956;1.39e-10;25!UBERON:0000203;1.39e-10;25!UBERON:0001017;2.64e-08;75!UBERON:0000955;5.36e-08;68!UBERON:0001016;1.02e-07;83 | |||
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|short_description=p1@GIGYF2 | |short_description=p1@GIGYF2 | ||
}} | }} |
Latest revision as of 22:12, 15 September 2015
Short description: | p1@GIGYF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GIGYF2_5end |
Coexpression cluster: | C2166_pineal_cerebellum_pituitary_lung_Mast_spinal_occipital |
Association with transcript: | 0bp_to_ENST00000409196, ENST00000409451, ENST00000409547, ENST00000421433, ENST00000423659, ENST00000425040, ENST00000430720, ENST00000464402, ENST00000475359, ENST00000484409, ENST00000488629, ENST00000488734, ENST00000490612, ENST00000492910, ENST00000535418_5end |
EntrezGene: | GIGYF2 |
HGNC: | 11960 |
UniProt: | E9PBB0A6H8W4Q6Y7W6C9JPV7C9JHW1C9JXQ0C9JHT0F5H3C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 3.69e-09 | 66 |
granulocyte monocyte progenitor cell | 1.30e-08 | 67 |
classical monocyte | 3.63e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.63e-08 | 42 |
myeloid cell | 9.31e-08 | 108 |
common myeloid progenitor | 9.31e-08 | 108 |
myeloid leukocyte | 1.49e-07 | 72 |
monopoietic cell | 3.40e-07 | 59 |
monocyte | 3.40e-07 | 59 |
monoblast | 3.40e-07 | 59 |
promonocyte | 3.40e-07 | 59 |
macrophage dendritic cell progenitor | 3.77e-07 | 61 |
defensive cell | 6.02e-07 | 48 |
phagocyte | 6.02e-07 | 48 |