FFCP PHASE1:Hg19::chr8:125740643..125740697,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:125740643..125740697,-
|short_description=p1@MTSS1
|description=CAGE_peak_1_at_MTSS1_5end
|association_with_transcript=0bp_to_ENST00000518547_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9788 | |EntrezGene=9788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20443 | |HGNC=20443 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000518547_5end | |||
|cluster_id=chr8:125740643..125740697,- | |||
|coexpression_cluster_id=C2008 | |||
|description=CAGE_peak_1_at_MTSS1_5end | |||
|id=chr8:125740643..125740697,- | |||
|ontology_enrichment_celltype=CL:0002057!2.32e-13!42;CL:0000860!1.41e-10!45;CL:0000557!2.50e-09!71;CL:0000839!1.27e-08!70;CL:0002009!1.68e-08!65;CL:0000766!2.42e-08!76;CL:0002194!1.26e-07!63;CL:0000576!1.26e-07!63;CL:0000040!1.26e-07!63;CL:0000559!1.26e-07!63;CL:0002393!7.76e-07!9;CL:0002397!7.76e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.04e-08;48!CL:0000860;3.58e-08;33!CL:0002057;3.58e-08;33!CL:0000473;8.92e-07;39!CL:0000234;8.92e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.43e-13,42;CL:0002057,1.43e-13,42;CL:0000473,4.35e-13,48;CL:0000234,4.35e-13,48;CL:0000557,7.45e-12,67;CL:0000839,6.05e-11,66;CL:0002009,6.65e-11,61;CL:0000766,1.85e-10,72;CL:0002194,6.79e-10,59;CL:0000576,6.79e-10,59;CL:0000040,6.79e-10,59;CL:0000559,6.79e-10,59;CL:0000763,8.15e-08,108;CL:0000049,8.15e-08,108;CL:0000738,6.13e-07,136;CL:0002393,6.23e-07,9;CL:0002397,6.23e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.63e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-25!115;UBERON:0001049!2.60e-14!57;UBERON:0005068!2.60e-14!57;UBERON:0006241!2.60e-14!57;UBERON:0007135!2.60e-14!57;UBERON:0001017!1.68e-11!82;UBERON:0005743!1.74e-11!86;UBERON:0003080!3.50e-11!42;UBERON:0002616!6.44e-11!59;UBERON:0002050!6.62e-11!605;UBERON:0005423!6.62e-11!605;UBERON:0002780!6.98e-11!41;UBERON:0001890!6.98e-11!41;UBERON:0006240!6.98e-11!41;UBERON:0000923!8.99e-11!604;UBERON:0005291!8.99e-11!604;UBERON:0006598!8.99e-11!604;UBERON:0002532!8.99e-11!604;UBERON:0000922!1.17e-10!612;UBERON:0000073!3.15e-10!94;UBERON:0001016!3.15e-10!94;UBERON:0000955!7.31e-10!69;UBERON:0006238!7.31e-10!69;UBERON:0001893!1.08e-09!34;UBERON:0000467!1.50e-09!625;UBERON:0002405!2.14e-09!115;UBERON:0002020!2.23e-09!34;UBERON:0003528!2.23e-09!34;UBERON:0002193!2.39e-09!112;UBERON:0002791!2.68e-09!33;UBERON:0000480!2.83e-09!626;UBERON:0000025!4.80e-09!194;UBERON:0002390!5.02e-09!102;UBERON:0003061!5.02e-09!102;UBERON:0001869!9.93e-09!32;UBERON:0000479!1.56e-08!787;UBERON:0004111!1.60e-08!241;UBERON:0002619!2.28e-08!22;UBERON:0000468!4.30e-08!659;UBERON:0002371!4.79e-08!80;UBERON:0001950!6.78e-08!20;UBERON:0003075!1.25e-07!86;UBERON:0007284!1.25e-07!86;UBERON:0002346!1.78e-07!90;UBERON:0001474!5.36e-07!86;UBERON:0000956!8.58e-07!25;UBERON:0000203!8.58e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.90e-08;22!UBERON:0002780;2.42e-08;41!UBERON:0001890;2.42e-08;41!UBERON:0001893;2.80e-08;34!UBERON:0000073;3.25e-08;53!UBERON:0002616;3.25e-08;53!UBERON:0003528;5.33e-08;34!UBERON:0002020;5.33e-08;34!UBERON:0001950;5.87e-08;20!UBERON:0002791;6.81e-08;32!UBERON:0001869;7.87e-08;32!UBERON:0007023;2.68e-07;114!UBERON:0000956;7.91e-07;25!UBERON:0000203;7.91e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.62e-25,114;UBERON:0001049,2.44e-14,56;UBERON:0005068,2.44e-14,56;UBERON:0006241,2.44e-14,56;UBERON:0007135,2.44e-14,56;UBERON:0002050,1.09e-13,564;UBERON:0005423,1.11e-13,581;UBERON:0000073,3.28e-13,53;UBERON:0002616,3.28e-13,53;UBERON:0000923,3.39e-13,560;UBERON:0010316,3.39e-13,560;UBERON:0005291,3.39e-13,560;UBERON:0006598,3.39e-13,560;UBERON:0010317,3.39e-13,560;UBERON:0002532,3.39e-13,560;UBERON:0000922,4.10e-12,592;UBERON:0002193,2.37e-11,108;UBERON:0001017,3.47e-11,81;UBERON:0002390,3.66e-11,98;UBERON:0003061,3.66e-11,98;UBERON:0002780,4.79e-11,41;UBERON:0001890,4.79e-11,41;UBERON:0003080,4.79e-11,41;UBERON:0006240,4.79e-11,41;UBERON:0000479,5.60e-11,773;UBERON:0002371,3.22e-10,76;UBERON:0002405,7.34e-10,93;UBERON:0001893,7.82e-10,34;UBERON:0001016,9.26e-10,89;UBERON:0000955,9.45e-10,68;UBERON:0006238,9.45e-10,68;UBERON:0003528,1.63e-09,34;UBERON:0002020,1.63e-09,34;UBERON:0001474,6.15e-09,82;UBERON:0002791,6.64e-09,32;UBERON:0001869,7.44e-09,32;UBERON:0002619,1.72e-08,22;UBERON:0000025,1.72e-08,192;UBERON:0003075,4.54e-08,82;UBERON:0007284,4.54e-08,82;UBERON:0001950,5.22e-08,20;UBERON:0004765,6.78e-08,90;UBERON:0002346,7.57e-08,86;UBERON:0004111,1.35e-07,240;UBERON:0010371,5.63e-07,104;UBERON:0000956,6.96e-07,25;UBERON:0000203,6.96e-07,25 | |||
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| ||
|short_description=p1@MTSS1 | |||
}} | }} |
Latest revision as of 02:06, 16 September 2015
Short description: | p1@MTSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTSS1_5end |
Coexpression cluster: | C2008_immature_migratory_CD14CD16_CD14_leukemia_mesothelioma_temporal |
Association with transcript: | 0bp_to_ENST00000518547_5end |
EntrezGene: | MTSS1 |
HGNC: | 20443 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.43e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.43e-13 | 42 |
defensive cell | 4.35e-13 | 48 |
phagocyte | 4.35e-13 | 48 |
granulocyte monocyte progenitor cell | 7.45e-12 | 67 |
myeloid lineage restricted progenitor cell | 6.05e-11 | 66 |
macrophage dendritic cell progenitor | 6.65e-11 | 61 |
myeloid leukocyte | 1.85e-10 | 72 |
monopoietic cell | 6.79e-10 | 59 |
monocyte | 6.79e-10 | 59 |
monoblast | 6.79e-10 | 59 |
promonocyte | 6.79e-10 | 59 |
myeloid cell | 8.15e-08 | 108 |
common myeloid progenitor | 8.15e-08 | 108 |
leukocyte | 6.13e-07 | 136 |
intermediate monocyte | 6.23e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.23e-07 | 9 |