FFCP PHASE1:Hg19::chr17:50237374..50237388,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:50237374..50237388,- to FFCP PHASE1:Hg19::chr17:50237374..50237388,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56934 | |EntrezGene=56934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1369 | |HGNC=1369 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS85 | |UniProt=Q9NS85 | ||
|association_with_transcript=0bp_to_ENST00000442502,NM_001082534,uc002ity.3,uc002itz.2_5end | |||
|cluster_id=chr17:50237374..50237388,- | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_9_at_CA10_5end | |||
|id=chr17:50237374..50237388,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.13e-24;3!UBERON:0006601;1.58e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.12e-111!57;UBERON:0005068!1.12e-111!57;UBERON:0006241!1.12e-111!57;UBERON:0007135!1.12e-111!57;UBERON:0002616!1.41e-92!59;UBERON:0001017!1.02e-90!82;UBERON:0000955!2.44e-90!69;UBERON:0006238!2.44e-90!69;UBERON:0005743!5.21e-90!86;UBERON:0002780!1.39e-84!41;UBERON:0001890!1.39e-84!41;UBERON:0006240!1.39e-84!41;UBERON:0003080!1.98e-82!42;UBERON:0000073!1.01e-80!94;UBERON:0001016!1.01e-80!94;UBERON:0003075!1.08e-78!86;UBERON:0007284!1.08e-78!86;UBERON:0002346!8.42e-75!90;UBERON:0001893!1.53e-72!34;UBERON:0002020!1.72e-72!34;UBERON:0003528!1.72e-72!34;UBERON:0002791!5.56e-69!33;UBERON:0002619!6.65e-69!22;UBERON:0001869!2.29e-66!32;UBERON:0001950!2.37e-62!20;UBERON:0000956!2.55e-60!25;UBERON:0000203!2.55e-60!25;UBERON:0007023!2.81e-60!115;UBERON:0003056!2.47e-58!61;UBERON:0000033!2.96e-52!123;UBERON:0000153!2.10e-49!129;UBERON:0007811!2.10e-49!129;UBERON:0004121!4.43e-41!169;UBERON:0000924!6.51e-40!173;UBERON:0006601!6.51e-40!173;UBERON:0000025!1.74e-29!194;UBERON:0003076!1.53e-28!15;UBERON:0003057!1.53e-28!15;UBERON:0000200!2.48e-23!6;UBERON:0001871!1.88e-22!7;UBERON:0004111!8.19e-22!241;UBERON:0004733!1.45e-19!12;UBERON:0002028!1.45e-19!12;UBERON:0007277!1.45e-19!12;UBERON:0002021!2.80e-19!5;UBERON:0000349!1.26e-18!5;UBERON:0000477!5.84e-18!286;UBERON:0004732!5.94e-18!13;UBERON:0000483!6.92e-17!309;UBERON:0000119!1.26e-16!312;UBERON:0002298!4.02e-16!8;UBERON:0002680!1.89e-15!9;UBERON:0001895!1.89e-15!9;UBERON:0010092!1.89e-15!9;UBERON:0003296!2.88e-15!4;UBERON:0010133!2.88e-15!4;UBERON:0000064!5.71e-15!219;UBERON:0000475!1.18e-14!365;UBERON:0002420!3.52e-14!9;UBERON:0007245!3.52e-14!9;UBERON:0010009!3.52e-14!9;UBERON:0010011!3.52e-14!9;UBERON:0000454!3.52e-14!9;UBERON:0002308!6.72e-14!9;UBERON:0000125!6.72e-14!9;UBERON:0001872!4.11e-13!5;UBERON:0001894!4.63e-13!7;UBERON:0006222!4.63e-13!7;UBERON:0002771!4.39e-12!3;UBERON:0000988!5.11e-12!3;UBERON:0006331!1.57e-11!3;UBERON:0002240!1.82e-11!3;UBERON:0000062!1.65e-09!511;UBERON:0001870!3.95e-09!2;UBERON:0001876!8.31e-09!2;UBERON:0001905!9.70e-09!2;UBERON:0002757!9.70e-09!2;UBERON:0010134!9.70e-09!2;UBERON:0002784!9.70e-09!2;UBERON:0005408!9.70e-09!2;UBERON:0001899!9.70e-09!2;UBERON:0002148!2.33e-08!2;UBERON:0009662!2.33e-08!2;UBERON:0009663!2.48e-08!7;UBERON:0000481!2.69e-08!347;UBERON:0000007!3.14e-08!2;UBERON:0001954!4.07e-08!2;UBERON:0003022!4.07e-08!2;UBERON:0002421!4.07e-08!2;UBERON:0002600!4.07e-08!2;UBERON:0005174!4.68e-07!5;UBERON:0001137!4.68e-07!5;UBERON:0002037!8.26e-07!6;UBERON:0006215!8.26e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.17e-66;20!UBERON:0002619;2.10e-60;22!UBERON:0000956;3.77e-53;25!UBERON:0000203;3.77e-53;25!UBERON:0001869;6.95e-44;32!UBERON:0001893;1.34e-39;34!UBERON:0002791;1.22e-37;32!UBERON:0003528;7.84e-35;34!UBERON:0002020;7.84e-35;34!UBERON:0002780;1.79e-31;41!UBERON:0001890;1.79e-31;41!UBERON:0000073;6.37e-30;53!UBERON:0002616;6.37e-30;53!UBERON:0000955;2.97e-28;68!UBERON:0001872;6.76e-24;5!UBERON:0001017;8.87e-24;75!UBERON:0002021;1.22e-23;5!UBERON:0001016;1.40e-20;83!UBERON:0000200;2.45e-20;6!UBERON:0001905;1.23e-15;2!UBERON:0002757;1.23e-15;2!UBERON:0010134;1.23e-15;2!UBERON:0005408;1.23e-15;2!UBERON:0001899;1.23e-15;2!UBERON:0002680;7.14e-14;9!UBERON:0001895;7.14e-14;9!UBERON:0002037;2.72e-12;6!UBERON:0001870;4.42e-11;3!UBERON:0007023;9.49e-11;114!UBERON:0004733;1.93e-10;12!UBERON:0002028;1.93e-10;12!UBERON:0001871;2.38e-10;6!UBERON:0004732;1.20e-09;13!UBERON:0011216;8.43e-09;132!UBERON:0002581;1.13e-08;1!UBERON:0002902;1.13e-08;1!UBERON:0002022;1.13e-08;1!UBERON:0003112;1.13e-08;1!UBERON:0011158;1.13e-08;1!UBERON:0009899;1.13e-08;1!UBERON:0007190;1.13e-08;1!UBERON:0003128;1.13e-08;1!UBERON:0001703;1.13e-08;1!UBERON:0002241;1.13e-08;1!UBERON:0003296;2.88e-08;4!UBERON:0010133;2.88e-08;4!UBERON:0002784;2.88e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.66e-66,20;UBERON:0002619,4.21e-60,22;UBERON:0000955,5.08e-57,68;UBERON:0006238,5.08e-57,68;UBERON:0000073,1.11e-56,53;UBERON:0002616,1.11e-56,53;UBERON:0001049,1.66e-53,56;UBERON:0005068,1.66e-53,56;UBERON:0006241,1.66e-53,56;UBERON:0007135,1.66e-53,56;UBERON:0000956,6.96e-53,25;UBERON:0000203,6.96e-53,25;UBERON:0001017,8.17e-52,81;UBERON:0001869,1.96e-47,32;UBERON:0002780,2.54e-47,41;UBERON:0001890,2.54e-47,41;UBERON:0003080,2.54e-47,41;UBERON:0006240,2.54e-47,41;UBERON:0001016,2.33e-46,89;UBERON:0001893,1.43e-44,34;UBERON:0002791,3.87e-41,32;UBERON:0003528,1.21e-38,34;UBERON:0002020,1.21e-38,34;UBERON:0003075,1.34e-35,82;UBERON:0007284,1.34e-35,82;UBERON:0002346,8.62e-34,86;UBERON:0007023,1.70e-33,114;UBERON:0003056,4.67e-31,61;UBERON:0010371,2.34e-27,104;UBERON:0001872,4.76e-24,5;UBERON:0002021,2.97e-23,5;UBERON:0010314,4.34e-23,132;UBERON:0004121,1.34e-22,171;UBERON:0000924,1.34e-22,171;UBERON:0006601,1.34e-22,171;UBERON:0000200,1.32e-20,6;UBERON:0011216,5.56e-18,223;UBERON:0001905,2.59e-15,2;UBERON:0002757,2.59e-15,2;UBERON:0010134,2.59e-15,2;UBERON:0005408,2.59e-15,2;UBERON:0001899,2.59e-15,2;UBERON:0002680,6.59e-14,9;UBERON:0001895,6.59e-14,9;UBERON:0010092,6.59e-14,9;UBERON:0000025,3.85e-13,192;UBERON:0002037,2.78e-12,6;UBERON:0006215,2.78e-12,6;UBERON:0001870,5.15e-11,3;UBERON:0004733,1.82e-10,12;UBERON:0002028,1.82e-10,12;UBERON:0007277,1.82e-10,12;UBERON:0001871,2.98e-10,6;UBERON:0004111,9.50e-10,240;UBERON:0004732,1.14e-09,13;UBERON:0002581,6.65e-09,1;UBERON:0007190,7.18e-09,1;UBERON:0002022,8.36e-09,1;UBERON:0003112,9.74e-09,1;UBERON:0011158,9.74e-09,1;UBERON:0003128,9.74e-09,1;UBERON:0001703,9.74e-09,1;UBERON:0002241,9.74e-09,1;UBERON:0004761,9.74e-09,1;UBERON:0009617,9.74e-09,1;UBERON:0002902,1.53e-08,1;UBERON:0009899,1.53e-08,1;UBERON:0003076,2.14e-08,15;UBERON:0003057,2.14e-08,15;UBERON:0003296,4.15e-08,4;UBERON:0010133,4.15e-08,4;UBERON:0002784,4.15e-08,4;UBERON:0000483,8.27e-07,306 | |||
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|short_description=p9@CA10 | |||
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Latest revision as of 05:55, 16 September 2015
Short description: | p9@CA10 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CA10_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000442502, NM_001082534, uc002ity.3, uc002itz.2_5end |
EntrezGene: | CA10 |
HGNC: | 1369 |
UniProt: | Q9NS85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data