FFCP PHASE1:Hg19::chr12:109458685..109458698,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55530 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25417 | |||
|TSSclassifier=strong | |||
|UniProt=F8VNW2,Q8N4V2 | |||
|association_with_transcript=146bp_to_ENST00000550046,ENST00000550490,ENST00000551429,NM_018711,uc010sxh.1_5end | |||
|cluster_id=chr12:109458685..109458698,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SVOP_5end | |||
|id=chr12:109458685..109458698,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.15e-18;3!UBERON:0006601;2.94e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.13e-74!57;UBERON:0005068!8.13e-74!57;UBERON:0006241!8.13e-74!57;UBERON:0007135!8.13e-74!57;UBERON:0000073!2.25e-69!94;UBERON:0001016!2.25e-69!94;UBERON:0001017!1.21e-68!82;UBERON:0005743!3.38e-68!86;UBERON:0002616!3.09e-67!59;UBERON:0002780!1.29e-65!41;UBERON:0001890!1.29e-65!41;UBERON:0006240!1.29e-65!41;UBERON:0000955!2.40e-65!69;UBERON:0006238!2.40e-65!69;UBERON:0003080!6.91e-64!42;UBERON:0003075!1.24e-56!86;UBERON:0007284!1.24e-56!86;UBERON:0001893!2.54e-56!34;UBERON:0002020!6.14e-56!34;UBERON:0003528!6.14e-56!34;UBERON:0001869!9.70e-56!32;UBERON:0002346!1.20e-53!90;UBERON:0002791!2.33e-53!33;UBERON:0002619!4.81e-53!22;UBERON:0003056!1.48e-47!61;UBERON:0001950!2.83e-47!20;UBERON:0000956!2.94e-46!25;UBERON:0000203!2.94e-46!25;UBERON:0007023!7.02e-45!115;UBERON:0004121!4.52e-37!169;UBERON:0000033!2.27e-36!123;UBERON:0000924!6.09e-36!173;UBERON:0006601!6.09e-36!173;UBERON:0000153!3.42e-34!129;UBERON:0007811!3.42e-34!129;UBERON:0000200!6.92e-20!6;UBERON:0001872!8.84e-17!5;UBERON:0000349!4.14e-16!5;UBERON:0000025!9.01e-16!194;UBERON:0001871!2.74e-14!7;UBERON:0002680!7.51e-12!9;UBERON:0001895!7.51e-12!9;UBERON:0010092!7.51e-12!9;UBERON:0003076!8.27e-12!15;UBERON:0003057!8.27e-12!15;UBERON:0002420!1.03e-11!9;UBERON:0007245!1.03e-11!9;UBERON:0010009!1.03e-11!9;UBERON:0010011!1.03e-11!9;UBERON:0000454!1.03e-11!9;UBERON:0004733!1.10e-11!12;UBERON:0002028!1.10e-11!12;UBERON:0007277!1.10e-11!12;UBERON:0000483!1.25e-11!309;UBERON:0000119!2.08e-11!312;UBERON:0002308!2.50e-11!9;UBERON:0000125!2.50e-11!9;UBERON:0002021!5.22e-11!5;UBERON:0004111!8.54e-11!241;UBERON:0004732!1.05e-10!13;UBERON:0002771!1.62e-10!3;UBERON:0001894!1.78e-10!7;UBERON:0006222!1.78e-10!7;UBERON:0000988!1.37e-09!3;UBERON:0000064!1.42e-09!219;UBERON:0000475!9.03e-09!365;UBERON:0000477!2.70e-08!286;UBERON:0001870!6.06e-08!2;UBERON:0003296!1.42e-07!4;UBERON:0010133!1.42e-07!4;UBERON:0000369!1.74e-07!4;UBERON:0002435!1.74e-07!4;UBERON:0000204!1.74e-07!4;UBERON:0010082!1.74e-07!4;UBERON:0001954!1.94e-07!2;UBERON:0003022!1.94e-07!2;UBERON:0002421!1.94e-07!2;UBERON:0002600!1.94e-07!2;UBERON:0001876!2.20e-07!2;UBERON:0001905!3.01e-07!2;UBERON:0002757!3.01e-07!2;UBERON:0010134!3.01e-07!2;UBERON:0002784!3.01e-07!2;UBERON:0005408!3.01e-07!2;UBERON:0001899!3.01e-07!2;UBERON:0009663!5.25e-07!7;UBERON:0002360!5.93e-07!2;UBERON:0000094!5.93e-07!2;UBERON:0007645!5.93e-07!2;UBERON:0002148!9.05e-07!2;UBERON:0009662!9.05e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.59e-96;22!UBERON:0001950;2.46e-94;20!UBERON:0000956;2.64e-84;25!UBERON:0000203;2.64e-84;25!UBERON:0001869;2.64e-71;32!UBERON:0001893;2.83e-68;34!UBERON:0002791;1.47e-63;32!UBERON:0003528;9.93e-61;34!UBERON:0002020;9.93e-61;34!UBERON:0002780;9.09e-46;41!UBERON:0001890;9.09e-46;41!UBERON:0000073;2.50e-40;53!UBERON:0002616;2.50e-40;53!UBERON:0000200;4.02e-38;6!UBERON:0001872;6.50e-32;5!UBERON:0000955;6.68e-29;68!UBERON:0001017;5.13e-27;75!UBERON:0001871;4.26e-22;6!UBERON:0001016;9.23e-22;83!UBERON:0002021;8.34e-21;5!UBERON:0001870;3.58e-20;3!UBERON:0000349;4.85e-20;5!UBERON:0002702;7.86e-14;2!UBERON:0002771;1.80e-13;2!UBERON:0001876;4.33e-13;2!UBERON:0007023;3.47e-12;114!UBERON:0002680;6.79e-11;9!UBERON:0001895;6.79e-11;9!UBERON:0002037;1.31e-09;6!UBERON:0011216;2.02e-09;132!UBERON:0004733;3.31e-08;12!UBERON:0002028;3.31e-08;12!UBERON:0002581;4.42e-08;1!UBERON:0002902;5.05e-08;1!UBERON:0009899;5.05e-08;1!UBERON:0007190;5.05e-08;1!UBERON:0002022;6.16e-08;1!UBERON:0001882;1.11e-07;1!UBERON:0005403;1.11e-07;1!UBERON:0004732;1.38e-07;13!UBERON:0003112;1.80e-07;1!UBERON:0011158;1.80e-07;1!UBERON:0003128;1.80e-07;1!UBERON:0001703;1.80e-07;1!UBERON:0002241;1.80e-07;1 | |||
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|short_description=p5@SVOP | |||
}} |
Latest revision as of 05:57, 16 September 2015
Short description: | p5@SVOP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SVOP_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 146bp_to_ENST00000550046, ENST00000550490, ENST00000551429, NM_018711, uc010sxh.1_5end |
EntrezGene: | SVOP |
HGNC: | 25417 |
UniProt: | F8VNW2Q8N4V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data