FFCP PHASE1:Hg19::chr9:136024780..136024827,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5900 | |EntrezGene=5900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9842 | |HGNC=9842 | ||
|TSSclassifier=strong | |||
|UniProt=Q6KH11 | |UniProt=Q6KH11 | ||
|association_with_transcript=-59bp_to_ENST00000393160_5end | |association_with_transcript=-59bp_to_ENST00000393160_5end | ||
|cluster_id=chr9:136024780..136024827,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_RALGDS_5end | |description=CAGE_peak_4_at_RALGDS_5end | ||
|id=chr9:136024780..136024827,- | |id=chr9:136024780..136024827,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.88e-19!94;UBERON:0001016!9.88e-19!94;UBERON:0005743!1.65e-18!86;UBERON:0001017!2.03e-17!82;UBERON:0003075!7.10e-16!86;UBERON:0007284!7.10e-16!86;UBERON:0002346!1.24e-15!90;UBERON:0001049!2.03e-15!57;UBERON:0005068!2.03e-15!57;UBERON:0006241!2.03e-15!57;UBERON:0007135!2.03e-15!57;UBERON:0000955!4.61e-15!69;UBERON:0006238!4.61e-15!69;UBERON:0002616!8.64e-15!59;UBERON:0007023!1.04e-12!115;UBERON:0001893!1.28e-12!34;UBERON:0001869!1.99e-12!32;UBERON:0002791!4.02e-12!33;UBERON:0002020!6.58e-12!34;UBERON:0003528!6.58e-12!34;UBERON:0002780!8.75e-12!41;UBERON:0001890!8.75e-12!41;UBERON:0006240!8.75e-12!41;UBERON:0003080!1.86e-11!42;UBERON:0000956!3.28e-11!25;UBERON:0000203!3.28e-11!25;UBERON:0002619!4.53e-11!22;UBERON:0003056!5.06e-11!61;UBERON:0001950!3.13e-10!20;UBERON:0000153!8.95e-10!129;UBERON:0007811!8.95e-10!129;UBERON:0000033!2.46e-09!123;UBERON:0000924!3.33e-09!173;UBERON:0006601!3.33e-09!173;UBERON:0004121!3.68e-09!169;UBERON:0000025!5.45e-07!194 | |ontology_enrichment_uberon=UBERON:0000073!9.88e-19!94;UBERON:0001016!9.88e-19!94;UBERON:0005743!1.65e-18!86;UBERON:0001017!2.03e-17!82;UBERON:0003075!7.10e-16!86;UBERON:0007284!7.10e-16!86;UBERON:0002346!1.24e-15!90;UBERON:0001049!2.03e-15!57;UBERON:0005068!2.03e-15!57;UBERON:0006241!2.03e-15!57;UBERON:0007135!2.03e-15!57;UBERON:0000955!4.61e-15!69;UBERON:0006238!4.61e-15!69;UBERON:0002616!8.64e-15!59;UBERON:0007023!1.04e-12!115;UBERON:0001893!1.28e-12!34;UBERON:0001869!1.99e-12!32;UBERON:0002791!4.02e-12!33;UBERON:0002020!6.58e-12!34;UBERON:0003528!6.58e-12!34;UBERON:0002780!8.75e-12!41;UBERON:0001890!8.75e-12!41;UBERON:0006240!8.75e-12!41;UBERON:0003080!1.86e-11!42;UBERON:0000956!3.28e-11!25;UBERON:0000203!3.28e-11!25;UBERON:0002619!4.53e-11!22;UBERON:0003056!5.06e-11!61;UBERON:0001950!3.13e-10!20;UBERON:0000153!8.95e-10!129;UBERON:0007811!8.95e-10!129;UBERON:0000033!2.46e-09!123;UBERON:0000924!3.33e-09!173;UBERON:0006601!3.33e-09!173;UBERON:0004121!3.68e-09!169;UBERON:0000025!5.45e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.97e-11;22!UBERON:0000956;3.23e-11;25!UBERON:0000203;3.23e-11;25!UBERON:0001869;6.35e-11;32!UBERON:0001893;1.28e-10;34!UBERON:0001950;1.73e-10;20!UBERON:0002791;3.27e-10;32!UBERON:0003528;5.02e-10;34!UBERON:0002020;5.02e-10;34!UBERON:0000073;3.34e-09;53!UBERON:0002616;3.34e-09;53!UBERON:0002780;6.40e-09;41!UBERON:0001890;6.40e-09;41!UBERON:0001017;1.84e-07;75!UBERON:0001016;4.77e-07;83!UBERON:0000955;9.65e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.10e-17,89;UBERON:0001017,1.82e-17,81;UBERON:0003075,6.26e-17,82;UBERON:0007284,6.26e-17,82;UBERON:0002346,1.22e-16,86;UBERON:0001049,5.61e-16,56;UBERON:0005068,5.61e-16,56;UBERON:0006241,5.61e-16,56;UBERON:0007135,5.61e-16,56;UBERON:0000073,1.67e-15,53;UBERON:0002616,1.67e-15,53;UBERON:0000955,2.48e-15,68;UBERON:0006238,2.48e-15,68;UBERON:0001893,7.93e-13,34;UBERON:0007023,9.37e-13,114;UBERON:0001869,1.24e-12,32;UBERON:0003528,4.20e-12,34;UBERON:0002020,4.20e-12,34;UBERON:0002780,6.15e-12,41;UBERON:0001890,6.15e-12,41;UBERON:0003080,6.15e-12,41;UBERON:0006240,6.15e-12,41;UBERON:0002791,8.05e-12,32;UBERON:0000956,2.16e-11,25;UBERON:0000203,2.16e-11,25;UBERON:0003056,2.29e-11,61;UBERON:0002619,3.00e-11,22;UBERON:0001950,2.15e-10,20;UBERON:0004121,3.16e-10,171;UBERON:0000924,3.16e-10,171;UBERON:0006601,3.16e-10,171;UBERON:0010371,1.09e-09,104;UBERON:0010314,6.50e-09,132;UBERON:0000025,3.11e-07,192 | |||
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| ||
|short_description=p4@RALGDS | |short_description=p4@RALGDS | ||
}} | }} |
Latest revision as of 06:25, 16 September 2015
Short description: | p4@RALGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RALGDS_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -59bp_to_ENST00000393160_5end |
EntrezGene: | RALGDS |
HGNC: | 9842 |
UniProt: | Q6KH11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.10e-17 | 89 |
central nervous system | 1.82e-17 | 81 |
neural plate | 6.26e-17 | 82 |
presumptive neural plate | 6.26e-17 | 82 |
neurectoderm | 1.22e-16 | 86 |
neural tube | 5.61e-16 | 56 |
neural rod | 5.61e-16 | 56 |
future spinal cord | 5.61e-16 | 56 |
neural keel | 5.61e-16 | 56 |
regional part of nervous system | 1.67e-15 | 53 |
regional part of brain | 1.67e-15 | 53 |
brain | 2.48e-15 | 68 |
future brain | 2.48e-15 | 68 |
telencephalon | 7.93e-13 | 34 |
adult organism | 9.37e-13 | 114 |
cerebral hemisphere | 1.24e-12 | 32 |
brain grey matter | 4.20e-12 | 34 |
gray matter | 4.20e-12 | 34 |
regional part of forebrain | 6.15e-12 | 41 |
forebrain | 6.15e-12 | 41 |
anterior neural tube | 6.15e-12 | 41 |
future forebrain | 6.15e-12 | 41 |
regional part of telencephalon | 8.05e-12 | 32 |
cerebral cortex | 2.16e-11 | 25 |
pallium | 2.16e-11 | 25 |
pre-chordal neural plate | 2.29e-11 | 61 |
regional part of cerebral cortex | 3.00e-11 | 22 |
neocortex | 2.15e-10 | 20 |
ectoderm-derived structure | 3.16e-10 | 171 |
ectoderm | 3.16e-10 | 171 |
presumptive ectoderm | 3.16e-10 | 171 |
ecto-epithelium | 1.09e-09 | 104 |
structure with developmental contribution from neural crest | 6.50e-09 | 132 |
tube | 3.11e-07 | 192 |