FFCP PHASE1:Hg19::chr6:152623336..152623343,-: Difference between revisions
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|id=chr6:152623336..152623343,-
|short_description=p28@SYNE1
|description=CAGE_peak_28_at_SYNE1_5end
|association_with_transcript=60bp_to_ENST00000489156_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=60bp_to_ENST00000489156_5end | |||
|cluster_id=chr6:152623336..152623343,- | |||
|description=CAGE_peak_28_at_SYNE1_5end | |||
|id=chr6:152623336..152623343,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.13e-23;3!UBERON:0010122;1.27e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.51e-22!57;UBERON:0005068!1.51e-22!57;UBERON:0006241!1.51e-22!57;UBERON:0007135!1.51e-22!57;UBERON:0001017!1.12e-20!82;UBERON:0005743!5.30e-20!86;UBERON:0000955!6.74e-20!69;UBERON:0006238!6.74e-20!69;UBERON:0002780!6.85e-19!41;UBERON:0001890!6.85e-19!41;UBERON:0006240!6.85e-19!41;UBERON:0002616!1.20e-18!59;UBERON:0000073!2.09e-18!94;UBERON:0001016!2.09e-18!94;UBERON:0003080!3.34e-18!42;UBERON:0002020!1.37e-17!34;UBERON:0003528!1.37e-17!34;UBERON:0001869!2.71e-17!32;UBERON:0001893!3.30e-17!34;UBERON:0002791!3.10e-16!33;UBERON:0003075!1.53e-15!86;UBERON:0007284!1.53e-15!86;UBERON:0002346!4.79e-15!90;UBERON:0007023!6.37e-15!115;UBERON:0000956!2.47e-14!25;UBERON:0000203!2.47e-14!25;UBERON:0002619!1.74e-13!22;UBERON:0003056!4.84e-12!61;UBERON:0001950!1.14e-11!20;UBERON:0000033!2.82e-08!123;UBERON:0000153!9.73e-08!129;UBERON:0007811!9.73e-08!129;UBERON:0000025!1.38e-07!194;UBERON:0004121!5.57e-07!169;UBERON:0000924!6.58e-07!173;UBERON:0006601!6.58e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.97e-34;2!UBERON:0002757;5.97e-34;2!UBERON:0010134;5.97e-34;2!UBERON:0005408;5.97e-34;2!UBERON:0001899;5.97e-34;2!UBERON:0003296;1.57e-17;4!UBERON:0010133;1.57e-17;4!UBERON:0002784;1.57e-17;4!UBERON:0002021;3.14e-14;5!UBERON:0002037;5.08e-12;6!UBERON:0002780;6.74e-11;41!UBERON:0001890;6.74e-11;41!UBERON:0001894;1.94e-10;7!UBERON:0000073;1.99e-10;53!UBERON:0002616;1.99e-10;53!UBERON:0001873;1.27e-09;2!UBERON:0000955;1.52e-08;68!UBERON:0002680;2.55e-08;9!UBERON:0001895;2.55e-08;9!UBERON:0002791;3.50e-08;32!UBERON:0001869;4.48e-08;32!UBERON:0003528;1.03e-07;34!UBERON:0002020;1.03e-07;34!UBERON:0001950;1.03e-07;20!UBERON:0001016;1.33e-07;83!UBERON:0002619;4.35e-07;22!UBERON:0001893;5.42e-07;34!UBERON:0005383;7.92e-07;3!UBERON:0005382;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.19e-33,2;UBERON:0002757,3.19e-33,2;UBERON:0010134,3.19e-33,2;UBERON:0005408,3.19e-33,2;UBERON:0001899,3.19e-33,2;UBERON:0000073,4.75e-19,53;UBERON:0002616,4.75e-19,53;UBERON:0001049,5.06e-18,56;UBERON:0005068,5.06e-18,56;UBERON:0006241,5.06e-18,56;UBERON:0007135,5.06e-18,56;UBERON:0003296,3.61e-17,4;UBERON:0010133,3.61e-17,4;UBERON:0002784,3.61e-17,4;UBERON:0000955,1.40e-14,68;UBERON:0006238,1.40e-14,68;UBERON:0002021,2.76e-14,5;UBERON:0002780,6.06e-14,41;UBERON:0001890,6.06e-14,41;UBERON:0003080,6.06e-14,41;UBERON:0006240,6.06e-14,41;UBERON:0001017,3.27e-12,81;UBERON:0003075,3.27e-12,82;UBERON:0007284,3.27e-12,82;UBERON:0002037,3.44e-12,6;UBERON:0006215,3.44e-12,6;UBERON:0002346,1.27e-11,86;UBERON:0001016,5.83e-11,89;UBERON:0001894,3.11e-10,7;UBERON:0006222,3.11e-10,7;UBERON:0001873,8.69e-10,2;UBERON:0010122,8.69e-10,2;UBERON:0010371,1.58e-09,104;UBERON:0003056,2.20e-09,61;UBERON:0002680,1.97e-08,9;UBERON:0001895,1.97e-08,9;UBERON:0010092,1.97e-08,9;UBERON:0002791,2.25e-08,32;UBERON:0001869,2.25e-08,32;UBERON:0003528,6.56e-08,34;UBERON:0002020,6.56e-08,34;UBERON:0001893,6.56e-08,34;UBERON:0001950,1.07e-07,20;UBERON:0010314,2.19e-07,132;UBERON:0002619,4.49e-07,22;UBERON:0005383,6.14e-07,3;UBERON:0005382,6.14e-07,3 | |||
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| ||
|short_description=p28@SYNE1 | |||
}} | }} |
Latest revision as of 06:34, 16 September 2015
Short description: | p28@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_SYNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENST00000489156_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data