FFCP PHASE1:Hg19::chr3:156840776..156840823,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339894 | |EntrezGene=339894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471357,NR_034007,uc003fbc.2_5end | |association_with_transcript=0bp_to_ENST00000471357,NR_034007,uc003fbc.2_5end | ||
|cluster_id=chr3:156840776..156840823,- | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_1_at_LOC339894_5end | |description=CAGE_peak_1_at_LOC339894_5end | ||
|id=chr3:156840776..156840823,- | |id=chr3:156840776..156840823,- | ||
|ontology_enrichment_celltype=CL:0002159!4.12e-07!13;CL:0002076!8.64e-07!43 | |ontology_enrichment_celltype=CL:0002159!4.12e-07!13;CL:0002076!8.64e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002536;1.58e-11;2!CL:0002548;2.32e-08;6!CL:0002494;7.45e-08;16!CL:0000746;1.04e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,1.35e-11,2;CL:0002548,2.60e-08,6;CL:0002494,8.99e-08,16;CL:0000746,1.37e-07,3;CL:0000513,1.37e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.79e-09;82!UBERON:0006241;2.77e-08;3!UBERON:0003057;2.77e-08;3!UBERON:0006215;9.23e-08;3!CL:0000513;1.04e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.62e-19!57;UBERON:0005068!4.62e-19!57;UBERON:0006241!4.62e-19!57;UBERON:0007135!4.62e-19!57;UBERON:0003075!4.92e-19!86;UBERON:0007284!4.92e-19!86;UBERON:0002346!1.48e-17!90;UBERON:0004121!4.54e-17!169;UBERON:0000033!1.64e-16!123;UBERON:0000924!3.20e-16!173;UBERON:0006601!3.20e-16!173;UBERON:0000153!1.16e-15!129;UBERON:0007811!1.16e-15!129;UBERON:0001017!1.29e-15!82;UBERON:0000955!1.49e-15!69;UBERON:0006238!1.49e-15!69;UBERON:0000483!1.83e-15!309;UBERON:0005743!3.15e-15!86;UBERON:0000119!4.73e-15!312;UBERON:0002616!5.88e-14!59;UBERON:0000073!1.31e-13!94;UBERON:0001016!1.31e-13!94;UBERON:0000481!7.82e-13!347;UBERON:0000062!1.45e-12!511;UBERON:0003076!3.59e-12!15;UBERON:0003057!3.59e-12!15;UBERON:0000475!1.56e-11!365;UBERON:0000923!6.96e-11!604;UBERON:0005291!6.96e-11!604;UBERON:0006598!6.96e-11!604;UBERON:0002532!6.96e-11!604;UBERON:0002050!8.40e-11!605;UBERON:0005423!8.40e-11!605;UBERON:0000922!1.03e-10!612;UBERON:0004111!1.35e-10!241;UBERON:0007023!1.96e-10!115;UBERON:0002780!2.66e-10!41;UBERON:0001890!2.66e-10!41;UBERON:0006240!2.66e-10!41;UBERON:0000025!4.10e-10!194;UBERON:0003080!6.61e-10!42;UBERON:0004732!8.87e-10!13;UBERON:0003056!3.13e-09!61;UBERON:0002298!6.57e-09!8;UBERON:0000477!1.28e-08!286;UBERON:0004733!1.37e-08!12;UBERON:0002028!1.37e-08!12;UBERON:0007277!1.37e-08!12;UBERON:0002020!2.92e-08!34;UBERON:0003528!2.92e-08!34;UBERON:0000467!6.65e-08!625;UBERON:0000480!7.82e-08!626;UBERON:0000468!1.13e-07!659;UBERON:0002791!1.58e-07!33;UBERON:0000064!1.81e-07!219;UBERON:0002308!1.84e-07!9;UBERON:0000125!1.84e-07!9;UBERON:0001893!3.52e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0004732;1.39e-24;13!UBERON:0002298;5.62e-22;6!UBERON:0004733;1.46e-20;12!UBERON:0002028;1.46e-20;12!UBERON:0001896;2.68e-17;3!UBERON:0005290;2.68e-17;3!UBERON:0000073;1.06e-12;53!UBERON:0002616;1.06e-12;53!UBERON:0000007;6.06e-12;2!UBERON:0005162;1.15e-11;2!UBERON:0000122;1.15e-11;2!UBERON:0001954;2.81e-11;2!UBERON:0003022;2.81e-11;2!UBERON:0002421;2.81e-11;2!UBERON:0002600;2.81e-11;2!UBERON:0002148;6.75e-11;2!UBERON:0006331;6.75e-11;2!UBERON:0009662;6.75e-11;2!UBERON:0000125;2.87e-09;9!UBERON:0002308;2.87e-09;9!UBERON:0002680;3.85e-09;9!UBERON:0001895;3.85e-09;9!UBERON:0001017;2.35e-08;75!UBERON:0002240;2.77e-08;3!UBERON:0005174;2.77e-08;3!UBERON:0001137;2.77e-08;3!UBERON:0000948;6.79e-08;22!UBERON:0001016;1.41e-07;83!UBERON:0000988;1.51e-07;3!UBERON:0001894;2.44e-07;7!UBERON:0000955;3.41e-07;68!UBERON:0007100;7.08e-07;25!UBERON:0002336;8.43e-07;1!UBERON:0011215;8.43e-07;1!UBERON:0001018;8.43e-07;1!UBERON:0002473;8.43e-07;1!UBERON:0005340;8.43e-07;1!UBERON:0003544;8.43e-07;1!UBERON:0005970;8.43e-07;1!UBERON:0002316;8.43e-07;1!UBERON:0001020;8.43e-07;1!UBERON:0002437;8.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,4.04e-27,15;UBERON:0003057,4.04e-27,15;UBERON:0004732,1.14e-24,13;UBERON:0001049,6.29e-23,56;UBERON:0005068,6.29e-23,56;UBERON:0006241,6.29e-23,56;UBERON:0007135,6.29e-23,56;UBERON:0002298,6.56e-22,6;UBERON:0004733,1.30e-20,12;UBERON:0002028,1.30e-20,12;UBERON:0007277,1.30e-20,12;UBERON:0010314,5.19e-19,132;UBERON:0003075,1.34e-18,82;UBERON:0007284,1.34e-18,82;UBERON:0000073,1.40e-18,53;UBERON:0002616,1.40e-18,53;UBERON:0001017,1.72e-18,81;UBERON:0001016,2.97e-18,89;UBERON:0002346,1.51e-17,86;UBERON:0001896,2.76e-17,3;UBERON:0005290,2.76e-17,3;UBERON:0010096,2.76e-17,3;UBERON:0000955,1.44e-15,68;UBERON:0006238,1.44e-15,68;UBERON:0010371,1.86e-15,104;UBERON:0007023,6.60e-14,114;UBERON:0004121,3.35e-13,171;UBERON:0000924,3.35e-13,171;UBERON:0006601,3.35e-13,171;UBERON:0000007,6.07e-12,2;UBERON:0005162,1.09e-11,2;UBERON:0000122,1.09e-11,2;UBERON:0000025,2.26e-11,192;UBERON:0001954,2.54e-11,2;UBERON:0003022,2.54e-11,2;UBERON:0002421,2.54e-11,2;UBERON:0002600,2.54e-11,2;UBERON:0002148,7.88e-11,2;UBERON:0006331,7.88e-11,2;UBERON:0009662,7.88e-11,2;UBERON:0000125,3.13e-09,9;UBERON:0002308,3.13e-09,9;UBERON:0002680,3.49e-09,9;UBERON:0001895,3.49e-09,9;UBERON:0010092,3.49e-09,9;UBERON:0002240,2.77e-08,3;UBERON:0005174,2.77e-08,3;UBERON:0001137,2.77e-08,3;UBERON:0004111,4.83e-08,240;UBERON:0011216,5.89e-08,223;UBERON:0000988,1.67e-07,3;UBERON:0001894,2.21e-07,7;UBERON:0006222,2.21e-07,7;UBERON:0000948,4.12e-07,24;UBERON:0005498,4.12e-07,24;UBERON:0004140,4.12e-07,24;UBERON:0009881,4.12e-07,24;UBERON:0004141,4.12e-07,24;UBERON:0003084,4.12e-07,24;UBERON:0007005,4.12e-07,24;UBERON:0004139,4.12e-07,24;UBERON:0004291,4.12e-07,24;UBERON:0002780,8.23e-07,41;UBERON:0001890,8.23e-07,41;UBERON:0003080,8.23e-07,41;UBERON:0006240,8.23e-07,41;UBERON:0002336,9.15e-07,1;UBERON:0011215,9.15e-07,1;UBERON:0001018,9.15e-07,1;UBERON:0002473,9.15e-07,1;UBERON:0005340,9.15e-07,1;UBERON:0003544,9.15e-07,1;UBERON:0005970,9.15e-07,1;UBERON:0002316,9.15e-07,1;UBERON:0001020,9.15e-07,1;UBERON:0002437,9.15e-07,1 | |||
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|short_description=p1@LOC339894 | |short_description=p1@LOC339894 | ||
}} | }} |
Latest revision as of 07:02, 16 September 2015
Short description: | p1@LOC339894 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC339894_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 0bp_to_ENST00000471357, NR_034007, uc003fbc.2_5end |
EntrezGene: | LOC339894 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 1.35e-11 | 2 |
cardiac fibroblast | 2.60e-08 | 6 |
cardiocyte | 8.99e-08 | 16 |
cardiac muscle cell | 1.37e-07 | 3 |
cardiac muscle myoblast | 1.37e-07 | 3 |