FFCP PHASE1:Hg19::chr2:241392210..241392222,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:241392210..241392222,+ to FFCP PHASE1:Hg19::chr2:241392210..241392222,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2817 | |EntrezGene=2817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4449 | |HGNC=4449 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000420138_5end | |||
|cluster_id=chr2:241392210..241392222,+ | |||
|coexpression_cluster_id=C66 | |||
|description=CAGE_peak_10_at_GPC1_5end | |||
|id=chr2:241392210..241392222,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.58e-09;82!UBERON:0006215;3.33e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.37e-31!82;UBERON:0001049!2.42e-29!57;UBERON:0005068!2.42e-29!57;UBERON:0006241!2.42e-29!57;UBERON:0007135!2.42e-29!57;UBERON:0005743!2.45e-29!86;UBERON:0000955!8.07e-27!69;UBERON:0006238!8.07e-27!69;UBERON:0000073!2.21e-26!94;UBERON:0001016!2.21e-26!94;UBERON:0002780!1.11e-25!41;UBERON:0001890!1.11e-25!41;UBERON:0006240!1.11e-25!41;UBERON:0007023!5.71e-25!115;UBERON:0002616!1.07e-24!59;UBERON:0003080!1.27e-24!42;UBERON:0004121!6.32e-23!169;UBERON:0000924!1.19e-22!173;UBERON:0006601!1.19e-22!173;UBERON:0001893!2.00e-22!34;UBERON:0002020!2.42e-22!34;UBERON:0003528!2.42e-22!34;UBERON:0003075!2.70e-22!86;UBERON:0007284!2.70e-22!86;UBERON:0002791!1.17e-21!33;UBERON:0002346!1.31e-21!90;UBERON:0001869!1.88e-21!32;UBERON:0000153!3.64e-20!129;UBERON:0007811!3.64e-20!129;UBERON:0000033!1.08e-19!123;UBERON:0000956!1.70e-18!25;UBERON:0000203!1.70e-18!25;UBERON:0002619!2.65e-17!22;UBERON:0003056!1.07e-16!61;UBERON:0001950!1.15e-15!20;UBERON:0000475!5.15e-12!365;UBERON:0000468!3.31e-10!659;UBERON:0004111!9.28e-10!241;UBERON:0000922!3.91e-09!612;UBERON:0000481!1.08e-08!347;UBERON:0000064!1.85e-08!219;UBERON:0000062!2.86e-08!511;UBERON:0000477!1.18e-07!286;UBERON:0002050!1.21e-07!605;UBERON:0005423!1.21e-07!605;UBERON:0000923!1.83e-07!604;UBERON:0005291!1.83e-07!604;UBERON:0006598!1.83e-07!604;UBERON:0002532!1.83e-07!604;UBERON:0000025!2.11e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.77e-34;32!UBERON:0000956;4.97e-34;25!UBERON:0000203;4.97e-34;25!UBERON:0001893;2.16e-33;34!UBERON:0002619;6.51e-33;22!UBERON:0003528;1.50e-32;34!UBERON:0002020;1.50e-32;34!UBERON:0002791;5.92e-32;32!UBERON:0000073;7.49e-30;53!UBERON:0002616;7.49e-30;53!UBERON:0001950;1.76e-29;20!UBERON:0002780;1.81e-28;41!UBERON:0001890;1.81e-28;41!UBERON:0000955;4.64e-20;68!UBERON:0001017;4.59e-18;75!UBERON:0001016;3.97e-15;83!UBERON:0000200;1.07e-11;6!UBERON:0004733;3.11e-10;12!UBERON:0002028;3.11e-10;12!UBERON:0002021;8.26e-10;5!UBERON:0001872;9.71e-10;5!UBERON:0004732;2.70e-09;13!UBERON:0002298;6.63e-09;6!UBERON:0007023;1.33e-08;114!UBERON:0011216;1.14e-07;132!UBERON:0001871;5.24e-07;6!UBERON:0002680;7.74e-07;9!UBERON:0001895;7.74e-07;9!UBERON:0001870;9.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.24e-50,53;UBERON:0002616,5.24e-50,53;UBERON:0001049,6.99e-49,56;UBERON:0005068,6.99e-49,56;UBERON:0006241,6.99e-49,56;UBERON:0007135,6.99e-49,56;UBERON:0000955,1.10e-45,68;UBERON:0006238,1.10e-45,68;UBERON:0001017,1.11e-43,81;UBERON:0002780,3.70e-40,41;UBERON:0001890,3.70e-40,41;UBERON:0003080,3.70e-40,41;UBERON:0006240,3.70e-40,41;UBERON:0001869,9.15e-39,32;UBERON:0001893,1.31e-38,34;UBERON:0003528,1.89e-38,34;UBERON:0002020,1.89e-38,34;UBERON:0001016,8.51e-38,89;UBERON:0002791,9.27e-36,32;UBERON:0003075,5.19e-34,82;UBERON:0007284,5.19e-34,82;UBERON:0000956,8.63e-34,25;UBERON:0000203,8.63e-34,25;UBERON:0002619,7.20e-33,22;UBERON:0002346,9.06e-32,86;UBERON:0001950,2.07e-29,20;UBERON:0003056,1.03e-28,61;UBERON:0007023,1.79e-28,114;UBERON:0010371,1.02e-27,104;UBERON:0004121,1.48e-25,171;UBERON:0000924,1.48e-25,171;UBERON:0006601,1.48e-25,171;UBERON:0010314,6.99e-20,132;UBERON:0011216,8.33e-19,223;UBERON:0000200,9.28e-12,6;UBERON:0004733,8.43e-11,12;UBERON:0002028,8.43e-11,12;UBERON:0007277,8.43e-11,12;UBERON:0001872,5.26e-10,5;UBERON:0003076,5.56e-10,15;UBERON:0003057,5.56e-10,15;UBERON:0004732,8.23e-10,13;UBERON:0002298,1.22e-09,6;UBERON:0002021,1.32e-09,5;UBERON:0004111,3.26e-08,240;UBERON:0000025,6.75e-08,192;UBERON:0002680,4.14e-07,9;UBERON:0001895,4.14e-07,9;UBERON:0010092,4.14e-07,9;UBERON:0001871,5.99e-07,6;UBERON:0000125,8.47e-07,9;UBERON:0002308,8.47e-07,9;UBERON:0000349,9.22e-07,5 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0,1.31883489114227,0.123766352960047,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0,0,0,2.28988789704845,1.09499540058307,0.251085279189606,0,0,0,0,0,0,0,1.50602959389125,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.24430121722827,1.09288586487763,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,1.74437620857014,0,0,0.662045904066094,0,0,0,0,0.49333509683432,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.929932030581889,0,0,0,0,0.336672227908132,0.125118519871964,0.831192346452549,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0.337552664482532,0,0,0.0920498986422993,1.2931684545505,0.710019185033229,0,0,0,0.818238361772504,0,0.487894824518382,0.397589304964456,0.69716365721711,1.24393266018445,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.245976877086227,0,0.548751427043128,0,0,0.925884451585296,0,0,0,0.579652024875384,0,0,0,0,3.1608175918371,1.71697232418975,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.499864955910285,0,0,0,0,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,1.27047312111232,3.90419561572865,0.773288812777695,0.837581326671744,2.55175500661265,0,0,0,0,1.00034104211935,0.271265023699736,0.415941723061614,0.356857977594324,0.630809660135739,1.05427273493442,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0,0,0.303127571446259,0,1.20956117331872,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,2.00506470303285,1.10497186723076,0.114814448164607,0,0.262248829918848,0,0.616122696835318,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,1.30012049207304,0,0,0,0,0,0,0.145016693914229,0,0.178064071293475,0.826424576804891,2.11409074101617,3.57315594984836,2.023155617111,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0.192444225451024,0.670302275535787,0,1.03558180854457,0.86101074534246,1.68471475667626,3.99087138183008,1.60806380144872,0,0,0,0,0,0,0,0,0.747768497892312,0,0.980160863924127,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,2.14870036263921,2.37571744666111,1.53580351049616,0.994147647766298,5.20476840718897,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,6.78532922266653,1.11321717794222,7.98455192004777,1.04171104434093,0.174919999992391,0,1.70690172428249,0.254253650292766,0.709163045303809,0,0,0.868124974666461,0,4.5826646677655,9.15490417902499,8.0722859749794,5.6154047601174,0.219385397153973,0,0,0.769502585037971,0,5.07240589653732,0.807818799687949,0.434589487688032,0.638002319463839,0.824378340616761,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,1.41542379259422,0,0.468528891450678,0,0.586993856796269,0.485560759068186,2.76209081994573,0,2.44858209304392,0.189559738885464,0,0,2.65861549082874,0.661983911750998,0,2.38944859545918,0,0.554698692052555,0.173559738335131,1.17590876897253,0.435296032902013,0.873633341210151,1.89184635718778,0,0,0,1.84279131327997,1.5003541537555,0.90392296312213,0.137041924646751,0,3.60871536948509,0.586654148204409,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,1.36677789121976,2.59263438078475,1.22313785466253,0.313808538937,0,0.288950589901519,0.600420288709789,1.9166753044879,0,0,0,0.837847203816763,0.916641696046735,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,3.97614844904652,4.494712401682,0.160753148465019,0.550157746388935,0,0,4.6428117273477,5.10296275927407,0,0.236417121897595,1.25891011523995,0.316801009558219,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,1.13312091520126,0,0,1.80996138906171,1.45455861916959,0.171086837884329,9.16259529011673,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0.785270481251171,3.54427271986794,5.00307686098049,4.256491644021,1.72022758707021,1.55300672151593,1.67660287941735,0.138348634936231,1.12482367165896,0,0,0,0,1.44921028610825,0,0,0,0,0.251567901752575,0,0,0,0.310874401165561,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0.751288044986092,0.380805212168795,0,0,0.107410557042488,0.46403375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| ||
|short_description=p10@GPC1 | |||
}} | }} |
Latest revision as of 07:29, 16 September 2015
Short description: | p10@GPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_GPC1_5end |
Coexpression cluster: | C66_cerebellum_middle_occipital_parietal_medial_amygdala_hippocampus |
Association with transcript: | -5bp_to_ENST00000420138_5end |
EntrezGene: | GPC1 |
HGNC: | 4449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data