FFCP PHASE1:Hg19::chr13:100634031..100634045,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12873 | |||
|TSSclassifier=strong | |||
|UniProt=O95409 | |||
|association_with_transcript=5bp_to_,-5bp_to_ENST00000376335,ENST00000397444,NM_007129_5end | |||
|cluster_id=chr13:100634031..100634045,+ | |||
|coexpression_cluster_id=C1024 | |||
|description=CAGE_peak_1_at_ZIC2_5end | |||
|id=chr13:100634031..100634045,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.64e-11!25;CL:0000133!6.06e-09!59;CL:0000047!7.16e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.37e-14;25!CL:0002322;7.34e-08;5!CL:0000540;1.02e-07;6!CL:0000404;1.02e-07;6!CL:0000095;2.00e-07;17!CL:0000243;2.04e-07;15!CL:0000125;2.04e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.74e-14,25;CL:0000133,1.39e-12,59;CL:0000047,7.07e-10,8;CL:0000221,1.14e-08,72;CL:0002322,7.22e-08,5;CL:0000540,1.10e-07,6;CL:0000031,1.10e-07,6;CL:0000404,1.10e-07,6;CL:0000243,2.31e-07,15;CL:0000125,2.31e-07,15;CL:0000030,2.31e-07,15;CL:0000339,2.31e-07,15;CL:0000095,2.33e-07,17;CL:0000123,2.33e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-12;82!CL:0000031;1.02e-07;6!CL:0000339;2.04e-07;15!CL:0000133;8.14e-07;59!UBERON:0006238;9.83e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.98e-18!143;DOID:162!1.66e-17!235;DOID:14566!2.11e-16!239;DOID:305!2.97e-12!106;DOID:3095!9.13e-08!22;DOID:2994!9.13e-08!22;DOID:299!8.88e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.46e-52!82;UBERON:0005743!1.32e-49!86;UBERON:0000073!3.43e-47!94;UBERON:0001016!3.43e-47!94;UBERON:0000955!6.67e-41!69;UBERON:0006238!6.67e-41!69;UBERON:0002616!6.73e-36!59;UBERON:0001049!6.05e-35!57;UBERON:0005068!6.05e-35!57;UBERON:0006241!6.05e-35!57;UBERON:0007135!6.05e-35!57;UBERON:0002346!1.11e-34!90;UBERON:0003075!2.83e-31!86;UBERON:0007284!2.83e-31!86;UBERON:0000924!1.33e-28!173;UBERON:0006601!1.33e-28!173;UBERON:0004121!7.27e-26!169;UBERON:0000033!2.00e-25!123;UBERON:0002780!5.15e-24!41;UBERON:0001890!5.15e-24!41;UBERON:0006240!5.15e-24!41;UBERON:0000153!1.70e-23!129;UBERON:0007811!1.70e-23!129;UBERON:0003080!4.41e-23!42;UBERON:0003056!6.17e-22!61;UBERON:0001893!1.01e-20!34;UBERON:0002020!3.56e-20!34;UBERON:0003528!3.56e-20!34;UBERON:0002791!4.88e-20!33;UBERON:0001869!1.78e-19!32;UBERON:0000956!1.06e-17!25;UBERON:0000203!1.06e-17!25;UBERON:0002619!7.51e-16!22;UBERON:0001950!1.70e-14!20;UBERON:0003076!3.68e-13!15;UBERON:0003057!3.68e-13!15;UBERON:0004733!3.48e-11!12;UBERON:0002028!3.48e-11!12;UBERON:0007277!3.48e-11!12;UBERON:0004732!5.79e-10!13;UBERON:0002680!6.70e-09!9;UBERON:0001895!6.70e-09!9;UBERON:0010092!6.70e-09!9;UBERON:0007023!1.17e-07!115;UBERON:0000064!2.14e-07!219;UBERON:0002037!2.65e-07!6;UBERON:0006215!2.65e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.83e-24;53!UBERON:0002616;3.83e-24;53!UBERON:0000956;5.22e-23;25!UBERON:0000203;5.22e-23;25!UBERON:0001893;4.54e-22;34!UBERON:0000955;6.22e-22;68!UBERON:0001869;1.23e-21;32!UBERON:0003528;1.44e-21;34!UBERON:0002020;1.44e-21;34!UBERON:0002791;2.75e-21;32!UBERON:0002619;1.53e-20;22!UBERON:0002780;1.59e-20;41!UBERON:0001890;1.59e-20;41!UBERON:0001017;2.29e-20;75!UBERON:0001016;6.47e-20;83!UBERON:0001950;8.95e-19;20!UBERON:0004733;3.30e-14;12!UBERON:0002028;3.30e-14;12!UBERON:0004732;8.16e-13;13!UBERON:0002680;3.14e-11;9!UBERON:0001895;3.14e-11;9!UBERON:0002037;3.89e-09;6!UBERON:0011216;3.76e-07;132!UBERON:0000200;5.99e-07;6!UBERON:0002298;8.34e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.80e-63,81;UBERON:0001016,1.17e-60,89;UBERON:0000955,1.16e-48,68;UBERON:0006238,1.16e-48,68;UBERON:0001049,1.77e-44,56;UBERON:0005068,1.77e-44,56;UBERON:0006241,1.77e-44,56;UBERON:0007135,1.77e-44,56;UBERON:0002346,8.33e-43,86;UBERON:0000073,1.13e-41,53;UBERON:0002616,1.13e-41,53;UBERON:0003075,2.39e-38,82;UBERON:0007284,2.39e-38,82;UBERON:0004121,4.89e-37,171;UBERON:0000924,4.89e-37,171;UBERON:0006601,4.89e-37,171;UBERON:0002780,7.34e-29,41;UBERON:0001890,7.34e-29,41;UBERON:0003080,7.34e-29,41;UBERON:0006240,7.34e-29,41;UBERON:0003056,2.99e-28,61;UBERON:0010371,5.87e-28,104;UBERON:0001893,1.01e-25,34;UBERON:0003528,5.12e-25,34;UBERON:0002020,5.12e-25,34;UBERON:0001869,4.38e-24,32;UBERON:0002791,8.78e-24,32;UBERON:0000956,4.85e-23,25;UBERON:0000203,4.85e-23,25;UBERON:0010314,1.16e-20,132;UBERON:0002619,1.35e-20,22;UBERON:0001950,8.29e-19,20;UBERON:0011216,1.21e-18,223;UBERON:0003076,7.68e-17,15;UBERON:0003057,7.68e-17,15;UBERON:0004733,3.09e-14,12;UBERON:0002028,3.09e-14,12;UBERON:0007277,3.09e-14,12;UBERON:0004732,7.69e-13,13;UBERON:0002680,3.14e-11,9;UBERON:0001895,3.14e-11,9;UBERON:0010092,3.14e-11,9;UBERON:0007023,8.80e-10,114;UBERON:0002037,3.93e-09,6;UBERON:0006215,3.93e-09,6;UBERON:0000200,5.55e-07,6;UBERON:0002298,7.78e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.866364470720326,1.65698687863958,0,0,0,0,33.8582909711167,36.1081223502328,27.2705607685936,6.29719171688325,5.06435372769671,4.77062030460251,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7474314775946,8.20398770611487,8.25646985515385,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.3581360753994,21.89468513024,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.5688234392288,38.4336328132307,36.4848980610288,49.1353400772856,45.4177531576131,45.2571925254029,1.56449532329816,0,0,0,0,1.18306800039844,0.842923450390509,0.723033089650446,1.65440959098591,0.653638332277218,0.474541238222193,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,9.43622956641891,0,0,0,0,0,0,7.21656710126366,40.3437809313267,10.6841911754598,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6688385559794,50.5713679846605,13.4942445910548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,5.7430967917057,0,0,0,0,0,0,0,0,27.950408664471,10.4111883086097,5.41302168944387,4.02039036802437,12.1208362814101,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0,0.234282829985426,0,0,0,0,0,0,246.51365724559,205.542910862703,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,1.19040304263846,0.41254749960294,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,16.747126621185,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3233515395122,3.84991942105343,0,0,0,0.782560276832555,1.11598390910176,0,0,0,0,0,0.684704037099577,0,0,2.53937666702405,0,0,0,0,5.53033375755224,3.13146551049382,5.67287081820489,0,2.78406173895242,1.23087398947712,4.05683517713975,0,0,0.18714054040822,0,3.51945513073589,0,10.2289012850309,0.23874448473769,0.593929361665277,0,6.95903353436409,7.03347082052564,0,10.3826440762859,0,0.796991953004279,0,0,0,0,0,0.539210106883961,0.895105873378046,0.511572370226872,0.0986434056369336,0,0,10.6626602070474,10.2972588959655,3.99227596002388,0.260427761085233,0,0,0.910347586283997,0.508507300585533,0.472775363535873,0,0.583209226766509,2.43074992906609,0,1.08536794762867,160.210823132937,58.8281662834115,136.838547575492,14.2600508150082,0.32681539055697,3.76444109552229,0,0,0,0.359030577639089,0,0.31900115973192,0,0,0,0,0,1.35357396370308,0.588187602953219,1.1747511088309,0.37950746544837,0,1.05499032264014,0.326465616318295,0,0,0,0,0,0,0,0,12.6040118673866,0.802577647298789,1.1713222286267,0.547364367646998,0.19566461893209,0.485560759068186,0,0,8.26396456402323,37.0273356622939,1.65355761355942,5.59916233545135,3.98792323624311,5.29587129400798,4.70899377610838,0,13.6612582094301,0.554698692052555,9.19866613176194,0,1.91530254476886,0,2.92376255201748,1.54810130062536,1.16942907337897,1.47807822695777,0,84.5493693704572,9.26521037200183,1.09633539717401,2.38457534043588,7.02749835110254,0,0.561111741760736,0,1.19885765749278,2.4495370916198,1.14536596165916,0.171594997861965,0,0.99402028452346,0.942776138467182,6.65930609760709,7.63600778080032,1.01998217636322,2.60055530911367,1.20084057741958,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57891607663566,0,3.97614844904652,12.3945099561534,33.115148583794,29.2958999952108,17.4484941972258,0,0,7.16844768564691,1.0063040627978,0,0.104909176269996,0.739202355635845,0,4.2221343410278,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,2.45637617086946,1.45455861916959,1.88195521672762,0,0,0,0,0,0,0,0,0,0,0,0,16.3336260100244,3.54427271986794,9.76210119215705,8.88855608016149,14.9086390879419,15.3082091120856,5.89915827943143,0.138348634936231,1.49976489554528,0,0,2.58792401667989,0,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,2.08795433572169,0,1.62065732026684,0,0.358177682162975,0,0,0,0.578742114812744,0.168942440653073,1.02496607435179,0.345430341731199,0.303859956177382,9.26331522216596,0,0,0,1.31043939538565,1.2288645437686,0.845248493434508,0,0,0,0,0.920529751259204,0,1.24415452006595,0,0,60.2328557308083,60.7205588347597,23.2533566037015,28.0598894534221,65.8098908215302,40.7810790120468,0,5.99349262009525,0,0,0,5.52371335829552,9.91876034279095,9.25876382531477,9.23023639083397,8.3183659753167,9.54370084006207,13.8869055243392,0,2.45369296252564,3.18518253038899,0.917142992608395,1.96393632455575,0,4.8325194824207,1.98916222116275,0,2.62216589314576,0,0.785720083444267,0.655087670040387,0.147856086217045,7.49667189264181,8.59185908475232,6.20060389503552,7.86356046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| |||
|short_description=p1@ZIC2 | |||
}} |
Latest revision as of 07:56, 16 September 2015
Short description: | p1@ZIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZIC2_5end |
Coexpression cluster: | C1024_Pericytes_cerebellum_neuroblastoma_HES3GFP_iPS_extraskeletal_teratocarcinoma |
Association with transcript: | 5bp_to_, -5bp_to_ENST00000376335, ENST00000397444, NM_007129_5end |
EntrezGene: | ZIC2 |
HGNC: | 12873 |
UniProt: | O95409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.74e-14 | 25 |
neurectodermal cell | 1.39e-12 | 59 |
neuronal stem cell | 7.07e-10 | 8 |
ectodermal cell | 1.14e-08 | 72 |
embryonic stem cell | 7.22e-08 | 5 |
neuron | 1.10e-07 | 6 |
neuroblast | 1.10e-07 | 6 |
electrically signaling cell | 1.10e-07 | 6 |
glial cell (sensu Vertebrata) | 2.31e-07 | 15 |
glial cell | 2.31e-07 | 15 |
glioblast | 2.31e-07 | 15 |
glioblast (sensu Vertebrata) | 2.31e-07 | 15 |
neuron associated cell | 2.33e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.33e-07 | 17 |