FFCP PHASE1:Hg19::chr14:89029308..89029318,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:89029308..89029318,+ to FFCP PHASE1:Hg19::chr14:89029308..89029318,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79882 | |EntrezGene=79882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20509 | |HGNC=20509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000302216_5end | |||
|cluster_id=chr14:89029308..89029318,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_ZC3H14_5end | |||
|id=chr14:89029308..89029318,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.01e-07;7!CL:0000586;9.01e-07;7 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.21e-07;10!UBERON:0005564;2.21e-07;10 | |||
|ontology_enrichment_disease=DOID:14566!1.82e-14!239;DOID:162!2.18e-14!235;DOID:3095!1.59e-10!22;DOID:2994!1.59e-10!22;DOID:0050687!2.61e-10!143;DOID:2531!8.41e-07!51;DOID:0060083!8.41e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.79e-12;22!DOID:2994;3.79e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.12e-12,22;DOID:2994,2.12e-12,22;DOID:14566,3.45e-09,239;DOID:162,5.36e-09,235;DOID:0050687,1.03e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.06e-15!94;UBERON:0001016!7.06e-15!94;UBERON:0001017!1.28e-13!82;UBERON:0005743!6.47e-13!86;UBERON:0001049!2.06e-11!57;UBERON:0005068!2.06e-11!57;UBERON:0006241!2.06e-11!57;UBERON:0007135!2.06e-11!57;UBERON:0002780!9.42e-11!41;UBERON:0001890!9.42e-11!41;UBERON:0006240!9.42e-11!41;UBERON:0003080!1.13e-10!42;UBERON:0000955!3.47e-10!69;UBERON:0006238!3.47e-10!69;UBERON:0001893!6.02e-10!34;UBERON:0002616!7.63e-10!59;UBERON:0000956!8.13e-10!25;UBERON:0000203!8.13e-10!25;UBERON:0002791!1.24e-09!33;UBERON:0001869!1.57e-09!32;UBERON:0002020!3.03e-09!34;UBERON:0003528!3.03e-09!34;UBERON:0002346!5.29e-09!90;UBERON:0002619!1.23e-08!22;UBERON:0000924!1.93e-08!173;UBERON:0006601!1.93e-08!173;UBERON:0001950!2.69e-08!20;UBERON:0003075!5.20e-08!86;UBERON:0007284!5.20e-08!86;UBERON:0004121!1.26e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;2.56e-10;25!UBERON:0000203;2.56e-10;25!UBERON:0001893;1.54e-09;34!UBERON:0001869;1.59e-09;32!UBERON:0002791;1.82e-09;32!UBERON:0002780;3.36e-09;41!UBERON:0001890;3.36e-09;41!UBERON:0003528;3.59e-09;34!UBERON:0002020;3.59e-09;34!UBERON:0001950;5.61e-09;20!UBERON:0002619;9.74e-09;22!UBERON:0000073;1.32e-08;53!UBERON:0002616;1.32e-08;53!UBERON:0001016;2.56e-07;83!UBERON:0000922;8.68e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.38e-19,89;UBERON:0001017,1.80e-16,81;UBERON:0000073,9.07e-14,53;UBERON:0002616,9.07e-14,53;UBERON:0001049,3.70e-13,56;UBERON:0005068,3.70e-13,56;UBERON:0006241,3.70e-13,56;UBERON:0007135,3.70e-13,56;UBERON:0002780,6.41e-13,41;UBERON:0001890,6.41e-13,41;UBERON:0003080,6.41e-13,41;UBERON:0006240,6.41e-13,41;UBERON:0000955,1.34e-12,68;UBERON:0006238,1.34e-12,68;UBERON:0001893,1.09e-11,34;UBERON:0000956,2.54e-11,25;UBERON:0000203,2.54e-11,25;UBERON:0001869,4.72e-11,32;UBERON:0002791,6.57e-11,32;UBERON:0003528,1.43e-10,34;UBERON:0002020,1.43e-10,34;UBERON:0001950,1.11e-09,20;UBERON:0002619,1.36e-09,22;UBERON:0004121,1.65e-09,171;UBERON:0000924,1.65e-09,171;UBERON:0006601,1.65e-09,171;UBERON:0002346,6.39e-09,86;UBERON:0003056,4.81e-08,61;UBERON:0003075,5.84e-08,82;UBERON:0007284,5.84e-08,82;UBERON:0007023,1.16e-07,114 | |||
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| ||
|short_description=p3@ZC3H14 | |||
}} | }} |
Latest revision as of 10:43, 16 September 2015
Short description: | p3@ZC3H14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZC3H14_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000302216_5end |
EntrezGene: | ZC3H14 |
HGNC: | 20509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 8.38e-19 | 89 |
central nervous system | 1.80e-16 | 81 |
regional part of nervous system | 9.07e-14 | 53 |
regional part of brain | 9.07e-14 | 53 |
neural tube | 3.70e-13 | 56 |
neural rod | 3.70e-13 | 56 |
future spinal cord | 3.70e-13 | 56 |
neural keel | 3.70e-13 | 56 |
regional part of forebrain | 6.41e-13 | 41 |
forebrain | 6.41e-13 | 41 |
anterior neural tube | 6.41e-13 | 41 |
future forebrain | 6.41e-13 | 41 |
brain | 1.34e-12 | 68 |
future brain | 1.34e-12 | 68 |
telencephalon | 1.09e-11 | 34 |
cerebral cortex | 2.54e-11 | 25 |
pallium | 2.54e-11 | 25 |
cerebral hemisphere | 4.72e-11 | 32 |
regional part of telencephalon | 6.57e-11 | 32 |
brain grey matter | 1.43e-10 | 34 |
gray matter | 1.43e-10 | 34 |
neocortex | 1.11e-09 | 20 |
regional part of cerebral cortex | 1.36e-09 | 22 |
ectoderm-derived structure | 1.65e-09 | 171 |
ectoderm | 1.65e-09 | 171 |
presumptive ectoderm | 1.65e-09 | 171 |
neurectoderm | 6.39e-09 | 86 |
pre-chordal neural plate | 4.81e-08 | 61 |
neural plate | 5.84e-08 | 82 |
presumptive neural plate | 5.84e-08 | 82 |
adult organism | 1.16e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.12e-12 | 22 |
germ cell cancer | 2.12e-12 | 22 |
disease of cellular proliferation | 3.45e-09 | 239 |
cancer | 5.36e-09 | 235 |
cell type cancer | 1.03e-07 | 143 |