FFCP PHASE1:Hg19::chr4:16900023..16900034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9079 | |EntrezGene=9079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6533 | |HGNC=6533 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000504189_5end | |association_with_transcript=-22bp_to_ENST00000504189_5end | ||
|cluster_id=chr4:16900023..16900034,- | |||
|coexpression_cluster_id=C1083 | |coexpression_cluster_id=C1083 | ||
|description=CAGE_peak_7_at_LDB2_5end | |description=CAGE_peak_7_at_LDB2_5end | ||
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|ontology_enrichment_celltype=CL:0002139!5.64e-16!24;CL:0000115!7.92e-14!35;CL:0000071!2.98e-11!18;CL:0002546!2.98e-11!18;CL:0002078!2.11e-09!44;CL:0000213!8.92e-07!57;CL:0000215!8.92e-07!57 | |ontology_enrichment_celltype=CL:0002139!5.64e-16!24;CL:0000115!7.92e-14!35;CL:0000071!2.98e-11!18;CL:0002546!2.98e-11!18;CL:0002078!2.11e-09!44;CL:0000213!8.92e-07!57;CL:0000215!8.92e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.67e-23;24!CL:0000115;1.06e-19;36!CL:0000071;5.93e-16;18!CL:0002078;8.05e-11;45!CL:0002138;2.21e-09;6!CL:0000213;3.15e-08;58!CL:0000215;3.15e-08;58!CL:1000413;5.94e-08;9 | |ontology_enrichment_celltype_v019=CL:0002139;1.67e-23;24!CL:0000115;1.06e-19;36!CL:0000071;5.93e-16;18!CL:0002078;8.05e-11;45!CL:0002138;2.21e-09;6!CL:0000213;3.15e-08;58!CL:0000215;3.15e-08;58!CL:1000413;5.94e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.96e-24,24;CL:0000115,1.01e-23,36;CL:0002078,3.41e-17,45;CL:0000071,3.37e-16,18;CL:0002546,3.37e-16,18;CL:0000213,1.85e-12,58;CL:0000215,1.85e-12,58;CL:0005020,1.33e-09,6;CL:0002138,1.33e-09,6;CL:0005022,1.33e-09,6;CL:1000413,4.32e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;5.93e-16;18!CL:0005022;2.21e-09;6!UBERON:0004872;9.84e-08;7 | |ontology_enrichment_development_v019=CL:0002546;5.93e-16;18!CL:0005022;2.21e-09;6!UBERON:0004872;9.84e-08;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;9.26e-20;20!UBERON:0002619;1.32e-19;22!UBERON:0000956;1.25e-16;25!UBERON:0000203;1.25e-16;25!UBERON:0004638;5.93e-16;18!UBERON:0001986;5.93e-16;18!UBERON:0004852;5.93e-16;18!UBERON:0000487;8.07e-14;22!UBERON:0001869;1.68e-13;32!UBERON:0001893;3.53e-12;34!UBERON:0002791;9.42e-12;32!UBERON:0006914;1.37e-11;25!UBERON:0003528;3.80e-11;34!UBERON:0002020;3.80e-11;34!UBERON:0000200;2.97e-10;6!UBERON:0007023;4.72e-10;114!UBERON:0002021;9.43e-09;5!UBERON:0002780;2.16e-08;41!UBERON:0001890;2.16e-08;41!UBERON:0003915;5.94e-08;9!UBERON:0004700;5.94e-08;9!UBERON:0001917;5.94e-08;9!UBERON:0000490;4.19e-07;33!UBERON:0001473;9.24e-07;8!UBERON:0004536;9.24e-07;8!UBERON:0006558;9.24e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001950;9.26e-20;20!UBERON:0002619;1.32e-19;22!UBERON:0000956;1.25e-16;25!UBERON:0000203;1.25e-16;25!UBERON:0004638;5.93e-16;18!UBERON:0001986;5.93e-16;18!UBERON:0004852;5.93e-16;18!UBERON:0000487;8.07e-14;22!UBERON:0001869;1.68e-13;32!UBERON:0001893;3.53e-12;34!UBERON:0002791;9.42e-12;32!UBERON:0006914;1.37e-11;25!UBERON:0003528;3.80e-11;34!UBERON:0002020;3.80e-11;34!UBERON:0000200;2.97e-10;6!UBERON:0007023;4.72e-10;114!UBERON:0002021;9.43e-09;5!UBERON:0002780;2.16e-08;41!UBERON:0001890;2.16e-08;41!UBERON:0003915;5.94e-08;9!UBERON:0004700;5.94e-08;9!UBERON:0001917;5.94e-08;9!UBERON:0000490;4.19e-07;33!UBERON:0001473;9.24e-07;8!UBERON:0004536;9.24e-07;8!UBERON:0006558;9.24e-07;8 | ||
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| ||
|short_description=p7@LDB2 | |short_description=p7@LDB2 | ||
}} | }} |
Latest revision as of 15:34, 16 September 2015
Short description: | p7@LDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LDB2_5end |
Coexpression cluster: | C1083_lung_uterus_Endothelial_neuroectodermal_spleen_mesenchymal_occipital |
Association with transcript: | -22bp_to_ENST00000504189_5end |
EntrezGene: | LDB2 |
HGNC: | 6533 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.96e-24 | 24 |
endothelial cell | 1.01e-23 | 36 |
meso-epithelial cell | 3.41e-17 | 45 |
blood vessel endothelial cell | 3.37e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.37e-16 | 18 |
lining cell | 1.85e-12 | 58 |
barrier cell | 1.85e-12 | 58 |
lymphangioblast | 1.33e-09 | 6 |
endothelial cell of lymphatic vessel | 1.33e-09 | 6 |
vascular lymphangioblast | 1.33e-09 | 6 |
endothelial cell of artery | 4.32e-08 | 9 |