FFCP PHASE1:Hg19::chr12:117176113..117176135,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:117176113..117176135,+
|short_description=p1@RNFT2
|description=CAGE_peak_1_at_RNFT2_5end
|association_with_transcript=0bp_to_ENST00000319176,ENST00000552...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84900 | |EntrezGene=84900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25905 | |HGNC=25905 | ||
|TSSclassifier=strong | |||
|UniProt=F8W6L4 | |UniProt=F8W6L4 | ||
|association_with_transcript=0bp_to_ENST00000319176,ENST00000552920_5end | |||
|cluster_id=chr12:117176113..117176135,+ | |||
|coexpression_cluster_id=C3243 | |||
|description=CAGE_peak_1_at_RNFT2_5end | |||
|id=chr12:117176113..117176135,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.99e-09!25;CL:0000133!4.62e-09!59;CL:0000333!9.85e-08!41 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.85e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.26e-10,25;CL:0000133,9.63e-09,59;CL:0000333,4.41e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.18e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!5.42e-19!143;DOID:305!6.36e-15!106;DOID:14566!2.15e-12!239;DOID:162!3.72e-12!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.09e-19,143;DOID:305,2.39e-14,106;DOID:162,1.84e-12,235;DOID:14566,1.93e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.81e-39!94;UBERON:0001016!5.81e-39!94;UBERON:0005743!4.40e-36!86;UBERON:0001017!3.05e-34!82;UBERON:0002346!1.39e-28!90;UBERON:0001049!1.50e-28!57;UBERON:0005068!1.50e-28!57;UBERON:0006241!1.50e-28!57;UBERON:0007135!1.50e-28!57;UBERON:0000955!2.15e-28!69;UBERON:0006238!2.15e-28!69;UBERON:0003075!8.82e-28!86;UBERON:0007284!8.82e-28!86;UBERON:0003056!1.25e-24!61;UBERON:0002616!2.20e-24!59;UBERON:0002780!1.20e-23!41;UBERON:0001890!1.20e-23!41;UBERON:0006240!1.20e-23!41;UBERON:0000924!1.59e-23!173;UBERON:0006601!1.59e-23!173;UBERON:0004121!1.23e-22!169;UBERON:0003080!3.15e-22!42;UBERON:0000033!6.85e-21!123;UBERON:0000153!9.11e-21!129;UBERON:0007811!9.11e-21!129;UBERON:0001893!2.64e-20!34;UBERON:0002020!3.39e-20!34;UBERON:0003528!3.39e-20!34;UBERON:0002791!1.31e-19!33;UBERON:0001869!1.42e-19!32;UBERON:0000956!1.44e-15!25;UBERON:0000203!1.44e-15!25;UBERON:0002619!7.05e-14!22;UBERON:0000064!6.56e-13!219;UBERON:0001950!7.59e-13!20;UBERON:0000481!9.17e-11!347;UBERON:0000475!3.23e-09!365;UBERON:0000119!3.38e-09!312;UBERON:0000025!3.51e-09!194;UBERON:0000477!6.84e-09!286;UBERON:0000483!6.93e-09!309;UBERON:0003076!1.70e-07!15;UBERON:0003057!1.70e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.07e-19;32!UBERON:0001893;2.45e-19;34!UBERON:0003528;3.77e-19;34!UBERON:0002020;3.77e-19;34!UBERON:0002791;5.10e-19;32!UBERON:0002780;1.93e-18;41!UBERON:0001890;1.93e-18;41!UBERON:0000073;7.89e-18;53!UBERON:0002616;7.89e-18;53!UBERON:0000956;6.43e-17;25!UBERON:0000203;6.43e-17;25!UBERON:0002619;4.45e-15;22!UBERON:0000955;9.64e-15;68!UBERON:0001017;2.73e-14;75!UBERON:0001016;4.09e-14;83!UBERON:0001950;5.61e-14;20!UBERON:0000489;3.64e-07;29!UBERON:0004732;5.07e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.07e-42,89;UBERON:0001017,6.56e-39,81;UBERON:0000955,1.56e-32,68;UBERON:0006238,1.56e-32,68;UBERON:0001049,2.57e-32,56;UBERON:0005068,2.57e-32,56;UBERON:0006241,2.57e-32,56;UBERON:0007135,2.57e-32,56;UBERON:0002346,3.43e-32,86;UBERON:0003075,2.38e-31,82;UBERON:0007284,2.38e-31,82;UBERON:0000073,6.39e-31,53;UBERON:0002616,6.39e-31,53;UBERON:0003056,1.66e-28,61;UBERON:0002780,1.67e-25,41;UBERON:0001890,1.67e-25,41;UBERON:0003080,1.67e-25,41;UBERON:0006240,1.67e-25,41;UBERON:0004121,2.94e-25,171;UBERON:0000924,2.94e-25,171;UBERON:0006601,2.94e-25,171;UBERON:0011216,2.27e-24,223;UBERON:0010371,4.19e-22,104;UBERON:0001893,7.05e-22,34;UBERON:0003528,9.23e-22,34;UBERON:0002020,9.23e-22,34;UBERON:0001869,4.37e-21,32;UBERON:0002791,1.29e-20,32;UBERON:0000956,9.66e-17,25;UBERON:0000203,9.66e-17,25;UBERON:0002619,6.55e-15,22;UBERON:0010314,2.02e-14,132;UBERON:0001950,8.59e-14,20;UBERON:0000025,5.94e-09,192;UBERON:0000119,3.50e-08,309;UBERON:0003076,5.38e-08,15;UBERON:0003057,5.38e-08,15;UBERON:0000483,7.09e-08,306;UBERON:0004732,3.82e-07,13 | |||
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| ||
|short_description=p1@RNFT2 | |||
}} | }} |
Latest revision as of 16:00, 16 September 2015
Short description: | p1@RNFT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNFT2_5end |
Coexpression cluster: | C3243_occipital_temporal_pons_paracentral_insula_parietal_postcentral |
Association with transcript: | 0bp_to_ENST00000319176, ENST00000552920_5end |
EntrezGene: | RNFT2 |
HGNC: | 25905 |
UniProt: | F8W6L4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.26e-10 | 25 |
neurectodermal cell | 9.63e-09 | 59 |
migratory neural crest cell | 4.41e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.09e-19 | 143 |
carcinoma | 2.39e-14 | 106 |
cancer | 1.84e-12 | 235 |
disease of cellular proliferation | 1.93e-12 | 239 |