FFCP PHASE1:Hg19::chr4:186392237..186392281,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256309 | |EntrezGene=256309 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28504 | |HGNC=28504 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506962,ENST00000507501_5end | |association_with_transcript=0bp_to_ENST00000506962,ENST00000507501_5end | ||
|cluster_id=chr4:186392237..186392281,- | |||
|description=CAGE_peak_1_at_CCDC110_5end | |description=CAGE_peak_1_at_CCDC110_5end | ||
|id=chr4:186392237..186392281,- | |id=chr4:186392237..186392281,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.92e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.12e-26!115;UBERON:0001049!6.81e-19!57;UBERON:0005068!6.81e-19!57;UBERON:0006241!6.81e-19!57;UBERON:0007135!6.81e-19!57;UBERON:0002616!8.91e-19!59;UBERON:0000955!3.36e-17!69;UBERON:0006238!3.36e-17!69;UBERON:0003075!1.25e-16!86;UBERON:0007284!1.25e-16!86;UBERON:0005743!2.05e-15!86;UBERON:0002346!3.06e-15!90;UBERON:0001017!3.38e-15!82;UBERON:0003080!3.75e-15!42;UBERON:0002780!4.79e-15!41;UBERON:0001890!4.79e-15!41;UBERON:0006240!4.79e-15!41;UBERON:0000153!1.67e-13!129;UBERON:0007811!1.67e-13!129;UBERON:0000033!2.54e-13!123;UBERON:0000073!5.93e-13!94;UBERON:0001016!5.93e-13!94;UBERON:0003056!4.83e-12!61;UBERON:0002020!8.46e-12!34;UBERON:0003528!8.46e-12!34;UBERON:0001893!1.68e-11!34;UBERON:0001869!3.03e-11!32;UBERON:0002791!3.60e-11!33;UBERON:0000475!3.81e-10!365;UBERON:0004121!1.55e-09!169;UBERON:0000924!6.04e-09!173;UBERON:0006601!6.04e-09!173;UBERON:0002619!1.09e-08!22;UBERON:0000481!1.20e-08!347;UBERON:0000956!4.19e-08!25;UBERON:0000203!4.19e-08!25;UBERON:0001950!1.03e-07!20;UBERON:0003133!2.35e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.54e-11;41!UBERON:0001890;1.54e-11;41!UBERON:0000073;3.08e-11;53!UBERON:0002616;3.08e-11;53!UBERON:0002791;5.56e-10;32!UBERON:0001869;1.77e-09;32!UBERON:0007023;6.00e-09;114!UBERON:0001893;6.16e-09;34!UBERON:0003528;8.47e-09;34!UBERON:0002020;8.47e-09;34!UBERON:0000955;7.73e-08;68!UBERON:0002619;1.59e-07;22!UBERON:0001017;2.47e-07;75!UBERON:0009663;3.89e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.21e-30,114;UBERON:0000073,8.24e-19,53;UBERON:0002616,8.24e-19,53;UBERON:0001049,2.89e-18,56;UBERON:0005068,2.89e-18,56;UBERON:0006241,2.89e-18,56;UBERON:0007135,2.89e-18,56;UBERON:0000955,4.09e-15,68;UBERON:0006238,4.09e-15,68;UBERON:0002780,5.10e-15,41;UBERON:0001890,5.10e-15,41;UBERON:0003080,5.10e-15,41;UBERON:0006240,5.10e-15,41;UBERON:0003075,1.34e-14,82;UBERON:0007284,1.34e-14,82;UBERON:0002346,2.82e-13,86;UBERON:0001017,4.20e-13,81;UBERON:0010371,2.78e-12,104;UBERON:0001016,7.11e-12,89;UBERON:0003056,5.83e-11,61;UBERON:0003528,6.77e-11,34;UBERON:0002020,6.77e-11,34;UBERON:0001869,7.12e-11,32;UBERON:0002791,9.73e-11,32;UBERON:0001893,1.01e-10,34;UBERON:0010314,1.84e-09,132;UBERON:0004121,1.72e-08,171;UBERON:0000924,1.72e-08,171;UBERON:0006601,1.72e-08,171;UBERON:0011216,7.08e-08,223;UBERON:0002619,7.83e-08,22;UBERON:0009663,7.45e-07,7 | |||
|phase1_expression=1.99846217197612,1.07050261945492,1.83240725324762,2.00146596706261,0,1.74467704820074,0,0.631719873426831,0.261185628199839,0,0,0.218441372130172,0,1.8564952944007,2.65117900582333,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0.313454721478088,0.572471974262113,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,1.85921281392724,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0.426730222566507,0,0,0.661044872784862,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,1.95553359980154,0.946895611469467,1.94826728407911,0,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0.593146252648242,0.535081656179426,1.04535523804977,0,0.766440987203842,0.34362744548263,0.253019692019503,1.27426165729639,0.651083453856419,0,1.6563263098555,0.895906278080929,0,1.18388626022008,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0.361439152384566,1.00267582127178,0.724232594804119,2.3858578411533,0.973269740605272,0.945348171640679,0.443458794925128,0.263504357079378,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0.81014194788176,0.535798369704479,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,0,1.98788780678127,1.2663051166458,0.662045904066094,0.286836620748814,0,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0.163461903113459,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0,0.204154171254893,0.368502951935304,0.516628905878827,0,0.494533858557114,0,0,0.673344455816265,0.750711119231785,0,1.31693286264251,0,0.751190294532984,0.567160915800105,0,0.213557388818567,0,0,0.206105058476878,0.515281080091258,0.558350568994769,0.168776332241266,0.292311015483596,0.252433774244115,0,1.61646056818812,0.355009592516614,0,0.169560592310488,0,0,0.286804595389004,0.731842236777572,1.06023814657188,0.69716365721711,0.10366105501537,0.504641701751257,1.45990943630332,0,0.643240938192885,0,0,0,0.118306800039844,0,0.482022059766964,0,0.217879444092406,0,0.404493924480493,0,0,0,0,0.4115740113314,0,0,3.9313088667105,1.18157981336281,0,0,1.02940686179115,0,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0.34779121492523,0.70445216541493,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0.507983154337352,0.763976851116555,1.17217447210047,0,0.719792448923265,0,1.42913216315289,0.448524337381443,0,0,0.904902010304444,0,0,0,0,0,0,0.266422179016099,1.14382394926518,0,0,0.977208552881205,0.355391948742546,0,0.301439377059586,1.74306691720059,0.99972991182057,0,0,0,0.239624855491583,1.14861935834114,2.85273810081437,1.30303176000821,0.410952645100767,0.895304816199478,0,0,0,0,0,0,0,1.17261385734044,0,0,0,0,1.96306386750624,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0.234282829985426,0.902838299183157,0,0,1.32845119707087,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0.213455115606889,0,1.66435439510497,0.30239029332968,1.98486246255021,1.53461973288062,0.561320188866147,1.92208723883551,0.511707249066704,0.804269605718038,1.48418066444991,0.462629081407967,0.355123450626254,1.23190734020714,0.519254429183621,0.813472649219715,0,0.200506470303285,0.184161977871793,0.229628896329213,0,0.262248829918848,0,0.847168708148562,0,0,0.316654886678627,0,0.170093705276516,0,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,0,1.62689197332152,1.03041011647722,0.183138929636687,0.330037999682352,0,0,1.6068392984416,0.290012154876366,0.308097234229289,0.15350367472613,0.551346289938122,0.966782203814463,1.16013355131383,0.170453254832202,0.623224249527161,0,0.192190067365106,0.127612712494584,0.10115778085555,0,1.25924938732256,0.6970372701606,0,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0.949138274156178,0.762520775695299,0.255897791311334,0,1.27281299170375,0,0.539617372749944,0.54907405947211,0.235624804691373,0.202182481573316,0,0,0,0,0,0.682499557039929,0.141405431953713,1.13008116620243,0,0.66343897524122,0,0.578775534266688,0.655894752046633,0.608731130888112,0,0,0.717056761020258,0.392996164052485,0,1.41904425628239,1.26664581178598,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,1.41215701165169,0,0,0,0,1.01489521846434,0.764637207142375,0,0,1.23408681925858,0,0,0.79312517629427,0.106824071127473,2.88743956579008,0.245040215981032,3.90186667764009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,1.02555725490326,0,0,1.13654458722565,0.95497793895076,0,1.22864280839693,0.994147647766298,0.703347082052564,3.22795244566427,0,0,0.398495976502139,1.65770349318689,1.76352923497993,0.306806047506464,0.492339221844278,0,0.359473404589307,1.79021174675609,0,3.84709281984041,0,0,0,1.76259386507517,0,0.7812832832557,0,0.724999575434793,0.3413803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| ||
|short_description=p1@CCDC110 | |short_description=p1@CCDC110 | ||
}} | }} |
Latest revision as of 03:30, 17 September 2015
Short description: | p1@CCDC110 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC110_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000506962, ENST00000507501_5end |
EntrezGene: | CCDC110 |
HGNC: | 28504 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.21e-30 | 114 |
regional part of nervous system | 8.24e-19 | 53 |
regional part of brain | 8.24e-19 | 53 |
neural tube | 2.89e-18 | 56 |
neural rod | 2.89e-18 | 56 |
future spinal cord | 2.89e-18 | 56 |
neural keel | 2.89e-18 | 56 |
brain | 4.09e-15 | 68 |
future brain | 4.09e-15 | 68 |
regional part of forebrain | 5.10e-15 | 41 |
forebrain | 5.10e-15 | 41 |
anterior neural tube | 5.10e-15 | 41 |
future forebrain | 5.10e-15 | 41 |
neural plate | 1.34e-14 | 82 |
presumptive neural plate | 1.34e-14 | 82 |
neurectoderm | 2.82e-13 | 86 |
central nervous system | 4.20e-13 | 81 |
ecto-epithelium | 2.78e-12 | 104 |
nervous system | 7.11e-12 | 89 |
pre-chordal neural plate | 5.83e-11 | 61 |
brain grey matter | 6.77e-11 | 34 |
gray matter | 6.77e-11 | 34 |
cerebral hemisphere | 7.12e-11 | 32 |
regional part of telencephalon | 9.73e-11 | 32 |
telencephalon | 1.01e-10 | 34 |
structure with developmental contribution from neural crest | 1.84e-09 | 132 |
ectoderm-derived structure | 1.72e-08 | 171 |
ectoderm | 1.72e-08 | 171 |
presumptive ectoderm | 1.72e-08 | 171 |
organ system subdivision | 7.08e-08 | 223 |
regional part of cerebral cortex | 7.83e-08 | 22 |
telencephalic nucleus | 7.45e-07 | 7 |